RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 TM4SF20Q53R12 229 aa7.97□□□□□ -1.13
LRRC28-204ENST00000558172 IL34Q6ZMJ4 242 aa7.97□□□□□ -1.13
LRRC28-204ENST00000558172 CYP2G1PQ6ZSU1 146 aa7.97□□□□□ -1.13
LRRC28-204ENST00000558172 BPIFCQ8NFQ6 507 aa7.97□□□□□ -1.13
LRRC28-204ENST00000558172 ZNF414Q96IQ9 312 aa7.97□□□□□ -1.13
LRRC28-204ENST00000558172 ZFAND3Q9H8U3 227 aa7.97□□□□□ -1.13
LRRC28-204ENST00000558172 TECRQ9NZ01 308 aaKnown RBP7.97□□□□□ -1.13
LRRC28-204ENST00000558172 PFDN2Q9UHV9 154 aa7.97□□□□□ -1.13
LRRC28-204ENST00000558172 TNFSF18Q9UNG2 199 aa7.97□□□□□ -1.13
LRRC28-204ENST00000558172 WDR83OSQ9Y284 106 aa7.97□□□□□ -1.13
LRRC28-204ENST00000558172 LSM4Q9Y4Z0 139 aaKnown RBP7.97□□□□□ -1.13
LRRC28-204ENST00000558172 FXYD6-FXYD2A0A087WZ82 144 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 WI2-2373I1.2A0A1W2PRP0 233 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 A0A1W2PS18 150 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 HMSDA8MTL9 139 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 G3V3Q6 166 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 IL4P05112 153 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 FOLR2P14207 255 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 NPPCP23582 126 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 S100A7P31151 101 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 AKAP14Q86UN6 197 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 TCTE3Q8IZS6 198 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 OR2K2Q8NGT1 345 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 RNF125Q96EQ8 232 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 NARS2Q96I59 477 aaKnown RBP7.96□□□□□ -1.14
LRRC28-204ENST00000558172 ST6GAL2Q96JF0 529 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 METTL26Q96S19 204 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 ATP5SQ99766 215 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 NBEAL1Q6ZS30 2694 aa7.96□□□□□ -1.14
LRRC28-204ENST00000558172 NOTCH1P46531 2555 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 IGHV7-4-1A0A0J9YVY3 117 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 UBE2L5PA0A1B0GUS4 154 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 AGPAT2O15120 278 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 IFNA5P01569 189 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 IGLV1-51P01701 117 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 CD5P06127 495 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 CRYBB3P26998 211 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 CAMLGP49069 296 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 AP2S1P53680 142 aaPredicted RBP7.95□□□□□ -1.14
LRRC28-204ENST00000558172 OR2F1Q13607 317 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 CLINT1Q14677 625 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 OXLD1Q5BKU9 147 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 SAMD5Q5TGI4 173 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 PXDC1Q5TGL8 231 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 BTNL8Q6UX41 500 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 S100A7AQ86SG5 101 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 DYNLRB2Q8TF09 96 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 PARD6GQ9BYG4 376 aaPredicted RBP7.95□□□□□ -1.14
LRRC28-204ENST00000558172 TMEM231Q9H6L2 316 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 SMPXQ9UHP9 88 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 RABAC1Q9UI14 185 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 SLC45A2Q9UMX9 530 aa7.95□□□□□ -1.14
LRRC28-204ENST00000558172 IGHV3OR16-8A0A075B7F1 116 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 A0A1B0GVG6 124 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 RNF222A6NCQ9 220 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 C17orf112F2Z3M2 114 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 SMLR1H3BR10 107 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 TAAR5O14804 337 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 ARPC5O15511 151 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 ZNF207O43670 478 aaKnown RBP7.94□□□□□ -1.14
LRRC28-204ENST00000558172 HNRNPCP07910 306 aaKnown RBP eCLIP7.94□□□□□ -1.14
LRRC28-204ENST00000558172 FGF7P21781 194 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 RPL29P47914 159 aaKnown RBP7.94□□□□□ -1.14
LRRC28-204ENST00000558172 EIF2B2P49770 351 aaKnown RBP7.94□□□□□ -1.14
LRRC28-204ENST00000558172 PLP1P60201 277 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 LYZP61626 148 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 ZNF266Q14584 549 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 USF2Q15853 346 aaPredicted RBP7.94□□□□□ -1.14
LRRC28-204ENST00000558172 LAMTOR1Q6IAA8 161 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 ADAMTSL5Q6ZMM2 481 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 Q6ZRG5 221 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 ZNF709Q8N972 641 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 SCGB1C1Q8TD33 95 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 GRAMD2BQ96HH9 432 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 MGST2Q99735 147 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 NEURL2Q9BR09 285 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 PBDC1Q9BVG4 233 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 RHPN1-AS1Q9BWJ2 59 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 SMIM3Q9BZL3 60 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 WDR61Q9GZS3 305 aaKnown RBP7.94□□□□□ -1.14
LRRC28-204ENST00000558172 MFFQ9GZY8 342 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 KCNIP2Q9NS61 270 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 FBXL17Q9UF56 701 aa7.94□□□□□ -1.14
LRRC28-204ENST00000558172 TRAV25A0A0B4J276 109 aa7.93□□□□□ -1.14
LRRC28-204ENST00000558172 G3V4G9 280 aa7.93□□□□□ -1.14
LRRC28-204ENST00000558172 CHEK1O14757 476 aa7.93□□□□□ -1.14
LRRC28-204ENST00000558172 LINC00869P0C866 280 aa7.93□□□□□ -1.14
LRRC28-204ENST00000558172 GATA2P23769 480 aaPredicted RBP7.93□□□□□ -1.14
LRRC28-204ENST00000558172 ZNF345Q14585 488 aa7.93□□□□□ -1.14
LRRC28-204ENST00000558172 OPCMLQ14982 345 aa7.93□□□□□ -1.14
LRRC28-204ENST00000558172 DEFB114Q30KQ6 69 aa7.93□□□□□ -1.14
LRRC28-204ENST00000558172 TMEM182Q6ZP80 229 aaPredicted RBP7.93□□□□□ -1.14
LRRC28-204ENST00000558172 GGTLC1Q9BX51 225 aa7.93□□□□□ -1.14
LRRC28-204ENST00000558172 NPCDR1Q9BY65 106 aa7.93□□□□□ -1.14
LRRC28-204ENST00000558172 VSIRQ9H7M9 311 aa7.93□□□□□ -1.14
LRRC28-204ENST00000558172 RNF24Q9Y225 148 aa7.93□□□□□ -1.14
LRRC28-204ENST00000558172 U3KQE9 123 aa7.93□□□□□ -1.14
LRRC28-204ENST00000558172 ELOA3CA0A087WX78 387 aaPredicted RBP7.92□□□□□ -1.14
LRRC28-204ENST00000558172 A0A0D9SG52 128 aa7.92□□□□□ -1.14
LRRC28-204ENST00000558172 HYPMO75409 117 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms