RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 ZNF73O43830 326 aaPredicted RBP1.69□□□□□ -2.14
SPG11-206ENST00000558093 OR2T1O43869 369 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 MRPS14O60783 128 aaKnown RBP1.69□□□□□ -2.14
SPG11-206ENST00000558093 TRGC2P03986 189 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 HLA-DPB1P04440 258 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 IL4P05112 153 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 CD2P06729 351 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 GZMBP10144 247 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 FABP2P12104 132 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 CRHBPP24387 322 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 IMPA1P29218 277 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 SDC2P34741 201 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 OPRM1P35372 400 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 CA7P43166 264 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 INPP1P49441 399 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 DAPP51397 102 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 FOXA1P55317 472 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 FOXA3P55318 350 aaPredicted RBP1.69□□□□□ -2.14
SPG11-206ENST00000558093 CRADDP78560 199 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 MYL5Q02045 173 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 CATR1Q13166 79 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 HES1Q14469 280 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 MSMO1Q15800 293 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 MRPL2Q5T653 305 aaKnown RBP1.69□□□□□ -2.14
SPG11-206ENST00000558093 LCN15Q6UWW0 184 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 SSX8Q7RTT4 187 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 TRAPPC6BQ86SZ2 158 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 MDP1Q86V88 176 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 LRP11Q86VZ4 500 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 C3orf22Q8N5N4 141 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 PLPP5Q8NEB5 264 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 OR5C1Q8NGR4 320 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 MRPL30Q8TCC3 161 aaKnown RBP1.69□□□□□ -2.14
SPG11-206ENST00000558093 TOMM6Q96B49 74 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 ABHD14BQ96IU4 210 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 TEX37Q96LM6 180 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 YPEL4Q96NS1 127 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 TSSK6Q9BXA6 273 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 SLC25A2Q9BXI2 301 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 BANF2Q9H503 90 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 CKLFQ9UBR5 152 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 FUT9Q9Y231 359 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 RNF11Q9Y3C5 154 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 WDR62O43379 1518 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 MYO5AQ9Y4I1 1855 aaKnown RBP1.69□□□□□ -2.14
SPG11-206ENST00000558093 CCDC141Q6ZP82 1450 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 SCN8AQ9UQD0 1980 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 ADAMTS12P58397 1594 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 ZC3H13Q5T200 1668 aaKnown RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 QRICH2Q9H0J4 1663 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 TROQ12816 1431 aaPredicted RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 FMN1Q68DA7 1419 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 RRBP1Q9P2E9 1410 aaKnown RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 POLEQ07864 2286 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 HEATR5AQ86XA9 2040 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 A0A0J9YW62 118 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 MEIS3P1A6NDR6 274 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 ARRDC5A6NEK1 342 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 TLCD2A6NGC4 264 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 CDC42EP2O14613 210 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 TAX1BP3O14907 124 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 UBE2L6O14933 153 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 NCR2O95944 276 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 NAPSAO96009 420 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 IGLV2-8P01709 118 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 PMP2P02689 132 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 CTSDP07339 412 aaPredicted RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 CXCL1P09341 107 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 SPINK8P0C7L1 97 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 ZNF705DP0CH99 300 aaPredicted RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 HIST1H1DP16402 221 aaKnown RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 ZNF93P35789 620 aaPredicted RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 ZNF80P51504 273 aaPredicted RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 TMBIM6P55061 237 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 UBA52P62987 128 aaKnown RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 PLGLB1Q02325 96 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 DIAPH2-AS1Q14236 149 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 PDGFRLQ15198 375 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 RRN3P1Q2M238 152 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 ORMDL2Q53FV1 153 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 SPANXN3Q5MJ09 141 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 C1orf140Q5VVS0 124 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 LAIR2Q6ISS4 152 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 LCA10Q71F78 164 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 LINC00305Q7Z4B0 112 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 RPP25LQ8N5L8 163 aaKnown RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 ZFP62Q8NB50 900 aaPredicted RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 WFDC11Q8NEX6 87 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 OR8D4Q8NGM9 314 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 OR1J4Q8NGS1 313 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 OR4K13Q8NH42 304 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 RTN4IP1Q8WWV3 396 aaPredicted RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 LCN9Q8WX39 176 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 LINC00052Q96N35 136 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 CIB3Q96Q77 187 aaPredicted RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 MIEN1Q9BRT3 115 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 TMEM191AQ9H0A3 160 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 PARP12Q9H0J9 701 aaKnown RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 RERGLQ9H628 205 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 RNF122Q9H9V4 155 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms