RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PXMP4Q9Y6I8 212 aa9.6□□□□□ -0.87
TPM1-209ENST00000558072 IGKV1D-37A0A075B6S9 117 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 LINC01619G3V211 115 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 HYPMO75409 117 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 IGKV1-17P01599 117 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 IGHV3-11P01762 117 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 LINC00869P0C866 280 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 M6PRP20645 277 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 RAB2AP61019 212 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 PRR20EP86478 221 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 PRR20CP86479 221 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 PRR20DP86480 221 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 PRR20BP86481 221 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 PRR20AP86496 221 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 TIGITQ495A1 244 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 AWAT1Q58HT5 328 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 FFAR4Q5NUL3 377 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 TEX261Q6UWH6 196 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 STPG3Q8N7X2 389 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 KLHL30-AS1Q8NEE0 82 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 UBQLN2Q9UHD9 624 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 BOLA1Q9Y3E2 137 aa9.59□□□□□ -0.87
TPM1-209ENST00000558072 C2CD3Q4AC94 2353 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 NIPBLQ6KC79 2804 aaeCLIP9.58□□□□□ -0.88
TPM1-209ENST00000558072 IGKV1OR2-108A0A075B7D4 117 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 A0A1W2PPV4 95 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 ANKRD34BA5PLL1 514 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 F8W735 103 aaPredicted RBP9.58□□□□□ -0.88
TPM1-209ENST00000558072 I3L521 148 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 COX7A2P2O60397 106 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 YIF1AO95070 293 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 IGHV3-23P01764 117 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 CD28P10747 220 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 PSG1P11464 419 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 ELLP55199 621 aaPredicted RBP9.58□□□□□ -0.88
TPM1-209ENST00000558072 TAS2R45P59539 299 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 RAB14P61106 215 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 RHOBP62745 196 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 TMEM41BQ5BJD5 291 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 OR1N2Q8NGR9 330 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 RSG1Q9BU20 258 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 MRPL32Q9BYC8 188 aaKnown RBP9.58□□□□□ -0.88
TPM1-209ENST00000558072 ACTR3CQ9C0K3 210 aaPredicted RBP9.58□□□□□ -0.88
TPM1-209ENST00000558072 DNAJC4Q9NNZ3 241 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 MRPL36Q9P0J6 103 aaKnown RBP9.58□□□□□ -0.88
TPM1-209ENST00000558072 UFC1Q9Y3C8 167 aa9.58□□□□□ -0.88
TPM1-209ENST00000558072 A0A1W2PS18 150 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 K7EMT4 169 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 MYCNOSP40205 109 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 SULT1A2P50226 295 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 BLOC1S1P78537 153 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 ZNF90Q03938 601 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 TCTEX1D4Q5JR98 221 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 C12orf54Q6X4T0 127 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 STXBP6Q8NFX7 210 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 OR4F17Q8NGA8 305 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 TMED6Q8WW62 240 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 RNF125Q96EQ8 232 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 SAT2Q96F10 170 aaPredicted RBP9.57□□□□□ -0.88
TPM1-209ENST00000558072 OR4F4Q96R69 305 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 METTL26Q96S19 204 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 MDFIQ99750 246 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 CITED2Q99967 270 aaPredicted RBP9.57□□□□□ -0.88
TPM1-209ENST00000558072 TMEM231Q9H6L2 316 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 PEMTQ9UBM1 199 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 RABAC1Q9UI14 185 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 HIGD1AQ9Y241 93 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 PUS1Q9Y606 427 aaKnown RBP eCLIP9.57□□□□□ -0.88
TPM1-209ENST00000558072 S4R3C0 116 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 JMJD1CQ15652 2540 aa9.57□□□□□ -0.88
TPM1-209ENST00000558072 FBN1P35555 2871 aaKnown RBP9.56□□□□□ -0.88
TPM1-209ENST00000558072 WI2-2373I1.2A0A1W2PRP0 233 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 LGALS9O00182 355 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 IL4P05112 153 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 CD5P06127 495 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 NPPCP23582 126 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 ADMP35318 185 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 LYZP61626 148 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 C10orf113Q5VZT2 155 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 MIC13Q5XKP0 118 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 C18orf65Q6ZTR6 163 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 REC114Q7Z4M0 266 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 C1QL4Q86Z23 238 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 ZNF680Q8NEM1 530 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 OR10G4Q8NGN3 311 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 OR10G9Q8NGN4 311 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 OR10G7Q8NGN6 311 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 MARC2Q969Z3 335 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 GRAMD2BQ96HH9 432 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 CHRDL1Q9BU40 450 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 ZNF747Q9BV97 191 aa9.56□□□□□ -0.88
TPM1-209ENST00000558072 SETD2Q9BYW2 2564 aaPredicted RBP9.55□□□□□ -0.88
TPM1-209ENST00000558072 M0QZ24 198 aa9.55□□□□□ -0.88
TPM1-209ENST00000558072 HBE1P02100 147 aa9.55□□□□□ -0.88
TPM1-209ENST00000558072 OR5G3P0C626 314 aa9.55□□□□□ -0.88
TPM1-209ENST00000558072 ORM2P19652 201 aa9.55□□□□□ -0.88
TPM1-209ENST00000558072 C1orf194Q5T5A4 169 aa9.55□□□□□ -0.88
TPM1-209ENST00000558072 SHISA2Q6UWI4 295 aa9.55□□□□□ -0.88
TPM1-209ENST00000558072 TOMM20LQ6UXN7 152 aa9.55□□□□□ -0.88
TPM1-209ENST00000558072 TMEM182Q6ZP80 229 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms