RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 GGCTO75223 188 aaKnown RBP13.03□□□□□ -0.32
SNX1-203ENST00000558040 M6PRP20645 277 aa13.03□□□□□ -0.32
SNX1-203ENST00000558040 GATA2P23769 480 aaPredicted RBP13.03□□□□□ -0.32
SNX1-203ENST00000558040 ADMP35318 185 aa13.03□□□□□ -0.32
SNX1-203ENST00000558040 TCTEX1D4Q5JR98 221 aa13.03□□□□□ -0.32
SNX1-203ENST00000558040 FAM74A1Q5RGS3 127 aa13.03□□□□□ -0.32
SNX1-203ENST00000558040 OR1L4Q8NGR5 311 aa13.03□□□□□ -0.32
SNX1-203ENST00000558040 C4orf3Q8WVX3 66 aa13.03□□□□□ -0.32
SNX1-203ENST00000558040 OR5B12Q96R08 314 aa13.03□□□□□ -0.32
SNX1-203ENST00000558040 PFDN5Q99471 154 aa13.03□□□□□ -0.32
SNX1-203ENST00000558040 C19orf24Q9BVV8 132 aa13.03□□□□□ -0.32
SNX1-203ENST00000558040 OR2C1O95371 312 aa13.02□□□□□ -0.33
SNX1-203ENST00000558040 CD28P10747 220 aa13.02□□□□□ -0.33
SNX1-203ENST00000558040 OR10G4Q8NGN3 311 aa13.02□□□□□ -0.33
SNX1-203ENST00000558040 OR10G9Q8NGN4 311 aa13.02□□□□□ -0.33
SNX1-203ENST00000558040 OR10G7Q8NGN6 311 aa13.02□□□□□ -0.33
SNX1-203ENST00000558040 TSSC4Q9Y5U2 329 aaPredicted RBP13.02□□□□□ -0.33
SNX1-203ENST00000558040 ELOA3CA0A087WX78 387 aaPredicted RBP13.01□□□□□ -0.33
SNX1-203ENST00000558040 NUDT19A8MXV4 375 aa13.01□□□□□ -0.33
SNX1-203ENST00000558040 COX7A2P2O60397 106 aa13.01□□□□□ -0.33
SNX1-203ENST00000558040 YIF1AO95070 293 aa13.01□□□□□ -0.33
SNX1-203ENST00000558040 TRBV12-3P01733 135 aa13.01□□□□□ -0.33
SNX1-203ENST00000558040 IL4P05112 153 aa13.01□□□□□ -0.33
SNX1-203ENST00000558040 PLP1P60201 277 aa13.01□□□□□ -0.33
SNX1-203ENST00000558040 RAB2AP61019 212 aa13.01□□□□□ -0.33
SNX1-203ENST00000558040 RAB14P61106 215 aa13.01□□□□□ -0.33
SNX1-203ENST00000558040 LYZP61626 148 aa13.01□□□□□ -0.33
SNX1-203ENST00000558040 S100A7AQ86SG5 101 aa13.01□□□□□ -0.33
SNX1-203ENST00000558040 KLHL30-AS1Q8NEE0 82 aa13.01□□□□□ -0.33
SNX1-203ENST00000558040 RNF125Q96EQ8 232 aa13.01□□□□□ -0.33
SNX1-203ENST00000558040 RNF2Q99496 336 aa13.01□□□□□ -0.33
SNX1-203ENST00000558040 PUS1Q9Y606 427 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNX1-203ENST00000558040 MAST4O15021 2626 aa13.01□□□□□ -0.33
SNX1-203ENST00000558040 ZNF705EA8MWA4 302 aaPredicted RBP13□□□□□ -0.33
SNX1-203ENST00000558040 I3L521 148 aa13□□□□□ -0.33
SNX1-203ENST00000558040 BMPR1BO00238 502 aa13□□□□□ -0.33
SNX1-203ENST00000558040 HYPMO75409 117 aa13□□□□□ -0.33
SNX1-203ENST00000558040 HSPB1P04792 205 aaKnown RBP13□□□□□ -0.33
SNX1-203ENST00000558040 OR5G3P0C626 314 aa13□□□□□ -0.33
SNX1-203ENST00000558040 ORM2P19652 201 aa13□□□□□ -0.33
SNX1-203ENST00000558040 S100A7P31151 101 aa13□□□□□ -0.33
SNX1-203ENST00000558040 C10orf113Q5VZT2 155 aa13□□□□□ -0.33
SNX1-203ENST00000558040 OR1B1Q8NGR6 318 aa13□□□□□ -0.33
SNX1-203ENST00000558040 FAM213BQ8TBF2 198 aa13□□□□□ -0.33
SNX1-203ENST00000558040 GATAD1Q8WUU5 269 aa13□□□□□ -0.33
SNX1-203ENST00000558040 PBDC1Q9BVG4 233 aa13□□□□□ -0.33
SNX1-203ENST00000558040 ACTR3CQ9C0K3 210 aaPredicted RBP13□□□□□ -0.33
SNX1-203ENST00000558040 VSIRQ9H7M9 311 aa13□□□□□ -0.33
SNX1-203ENST00000558040 DNAJC4Q9NNZ3 241 aa13□□□□□ -0.33
SNX1-203ENST00000558040 RPRMQ9NS64 109 aa13□□□□□ -0.33
SNX1-203ENST00000558040 PLA2G2EQ9NZK7 142 aa13□□□□□ -0.33
SNX1-203ENST00000558040 DOK5Q9P104 306 aa13□□□□□ -0.33
SNX1-203ENST00000558040 A0A1W2PPV4 95 aa12.99□□□□□ -0.33
SNX1-203ENST00000558040 WI2-2373I1.2A0A1W2PRP0 233 aa12.99□□□□□ -0.33
SNX1-203ENST00000558040 NDUFA4O00483 81 aa12.99□□□□□ -0.33
SNX1-203ENST00000558040 RHOBP62745 196 aa12.99□□□□□ -0.33
SNX1-203ENST00000558040 BLOC1S1P78537 153 aa12.99□□□□□ -0.33
SNX1-203ENST00000558040 RPEL1Q2QD12 228 aa12.99□□□□□ -0.33
SNX1-203ENST00000558040 GCSAMLQ5JQS6 135 aa12.99□□□□□ -0.33
SNX1-203ENST00000558040 C11orf44Q8N8P7 122 aa12.99□□□□□ -0.33
SNX1-203ENST00000558040 SAT2Q96F10 170 aaPredicted RBP12.99□□□□□ -0.33
SNX1-203ENST00000558040 CITED2Q99967 270 aaPredicted RBP12.99□□□□□ -0.33
SNX1-203ENST00000558040 HIGD1AQ9Y241 93 aa12.99□□□□□ -0.33
SNX1-203ENST00000558040 IGHV3-35A0A0C4DH35 117 aa12.98□□□□□ -0.33
SNX1-203ENST00000558040 ZP3P21754 424 aa12.98□□□□□ -0.33
SNX1-203ENST00000558040 CDC34P49427 236 aaPredicted RBP12.98□□□□□ -0.33
SNX1-203ENST00000558040 FAM106AQ4KMX7 169 aa12.98□□□□□ -0.33
SNX1-203ENST00000558040 FAM122CQ6P4D5 195 aa12.98□□□□□ -0.33
SNX1-203ENST00000558040 TOMM20LQ6UXN7 152 aa12.98□□□□□ -0.33
SNX1-203ENST00000558040 PRIMA1Q86XR5 153 aa12.98□□□□□ -0.33
SNX1-203ENST00000558040 RPP25LQ8N5L8 163 aaKnown RBP12.98□□□□□ -0.33
SNX1-203ENST00000558040 DPF1Q92782 380 aa12.98□□□□□ -0.33
SNX1-203ENST00000558040 MRPL32Q9BYC8 188 aaKnown RBP12.98□□□□□ -0.33
SNX1-203ENST00000558040 IGHV4OR15-8A0A075B7B6 117 aa12.97□□□□□ -0.33
SNX1-203ENST00000558040 A0A087WW49 117 aa12.97□□□□□ -0.33
SNX1-203ENST00000558040 CTXND1A0A1B0GTU2 59 aa12.97□□□□□ -0.33
SNX1-203ENST00000558040 SEC14L6B5MCN3 397 aa12.97□□□□□ -0.33
SNX1-203ENST00000558040 KRTAP24-1Q3LI83 254 aa12.97□□□□□ -0.33
SNX1-203ENST00000558040 AWAT1Q58HT5 328 aa12.97□□□□□ -0.33
SNX1-203ENST00000558040 FAM78BQ5VT40 261 aa12.97□□□□□ -0.33
SNX1-203ENST00000558040 GPHB5Q86YW7 130 aa12.97□□□□□ -0.33
SNX1-203ENST00000558040 TMEM37Q8WXS4 190 aa12.97□□□□□ -0.33
SNX1-203ENST00000558040 RCC1LQ96I51 464 aaKnown RBP12.97□□□□□ -0.33
SNX1-203ENST00000558040 ZFAND3Q9H8U3 227 aa12.97□□□□□ -0.33
SNX1-203ENST00000558040 SLC25A22Q9H936 323 aa12.97□□□□□ -0.33
SNX1-203ENST00000558040 PFDN2Q9UHV9 154 aa12.97□□□□□ -0.33
SNX1-203ENST00000558040 RABAC1Q9UI14 185 aa12.97□□□□□ -0.33
SNX1-203ENST00000558040 RNF24Q9Y225 148 aa12.97□□□□□ -0.33
SNX1-203ENST00000558040 CUBNO60494 3623 aa12.96□□□□□ -0.33
SNX1-203ENST00000558040 A0A1W2PRX2 142 aa12.96□□□□□ -0.33
SNX1-203ENST00000558040 LINC01619G3V211 115 aa12.96□□□□□ -0.33
SNX1-203ENST00000558040 TEX46H3BTG2 121 aa12.96□□□□□ -0.33
SNX1-203ENST00000558040 H2AFB1P0C5Y9 115 aa12.96□□□□□ -0.33
SNX1-203ENST00000558040 FHITP49789 147 aa12.96□□□□□ -0.33
SNX1-203ENST00000558040 USF2Q15853 346 aaPredicted RBP12.96□□□□□ -0.33
SNX1-203ENST00000558040 C18orf65Q6ZTR6 163 aa12.96□□□□□ -0.33
SNX1-203ENST00000558040 NDUFA11Q86Y39 141 aa12.96□□□□□ -0.33
SNX1-203ENST00000558040 OR1N2Q8NGR9 330 aa12.96□□□□□ -0.33
SNX1-203ENST00000558040 MRPL27Q9P0M9 148 aaKnown RBP12.96□□□□□ -0.33
SNX1-203ENST00000558040 FUT9Q9Y231 359 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms