RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 C2orf70A6NJV1 201 aa11.62□□□□□ -0.55
NEDD1-213ENST00000557644 IL4P05112 153 aa11.62□□□□□ -0.55
NEDD1-213ENST00000557644 CSN3P07498 182 aa11.62□□□□□ -0.55
NEDD1-213ENST00000557644 NUP62P37198 522 aaPredicted RBP11.62□□□□□ -0.55
NEDD1-213ENST00000557644 OXLD1Q5BKU9 147 aa11.62□□□□□ -0.55
NEDD1-213ENST00000557644 ATP5SQ99766 215 aa11.62□□□□□ -0.55
NEDD1-213ENST00000557644 PEMTQ9UBM1 199 aa11.62□□□□□ -0.55
NEDD1-213ENST00000557644 IGHV3-49A0A0A0MS15 119 aa11.61□□□□□ -0.55
NEDD1-213ENST00000557644 A8MWP6 167 aa11.61□□□□□ -0.55
NEDD1-213ENST00000557644 SAP30O75446 220 aa11.61□□□□□ -0.55
NEDD1-213ENST00000557644 USF2Q15853 346 aaPredicted RBP11.61□□□□□ -0.55
NEDD1-213ENST00000557644 BTNL8Q6UX41 500 aa11.61□□□□□ -0.55
NEDD1-213ENST00000557644 CYP2G1PQ6ZSU1 146 aa11.61□□□□□ -0.55
NEDD1-213ENST00000557644 DAZ1Q9NQZ3 744 aaKnown RBP11.61□□□□□ -0.55
NEDD1-213ENST00000557644 AGPAT2O15120 278 aa11.61□□□□□ -0.55
NEDD1-213ENST00000557644 FOLR2P14207 255 aa11.61□□□□□ -0.55
NEDD1-213ENST00000557644 FGF7P21781 194 aa11.61□□□□□ -0.55
NEDD1-213ENST00000557644 OR51G1Q8NGK1 321 aa11.61□□□□□ -0.55
NEDD1-213ENST00000557644 NEURL2Q9BR09 285 aa11.61□□□□□ -0.55
NEDD1-213ENST00000557644 MFFQ9GZY8 342 aa11.61□□□□□ -0.55
NEDD1-213ENST00000557644 UFC1Q9Y3C8 167 aa11.61□□□□□ -0.55
NEDD1-213ENST00000557644 IGHV3OR16-13A0A075B7E8 117 aa11.6□□□□□ -0.55
NEDD1-213ENST00000557644 IGHV3-74A0A0B4J1X5 117 aa11.6□□□□□ -0.55
NEDD1-213ENST00000557644 CBLN1P23435 193 aa11.6□□□□□ -0.55
NEDD1-213ENST00000557644 PBDC1Q9BVG4 233 aa11.6□□□□□ -0.55
NEDD1-213ENST00000557644 NOTCH1P46531 2555 aa11.6□□□□□ -0.55
NEDD1-213ENST00000557644 NBEAL1Q6ZS30 2694 aa11.6□□□□□ -0.55
NEDD1-213ENST00000557644 APOHP02749 345 aaPredicted RBP11.6□□□□□ -0.55
NEDD1-213ENST00000557644 LYZP61626 148 aa11.6□□□□□ -0.55
NEDD1-213ENST00000557644 BPIFCQ8NFQ6 507 aa11.6□□□□□ -0.55
NEDD1-213ENST00000557644 ELOVL1Q9BW60 279 aa11.6□□□□□ -0.55
NEDD1-213ENST00000557644 WI2-2373I1.2A0A1W2PRP0 233 aa11.59□□□□□ -0.55
NEDD1-213ENST00000557644 CAMLGP49069 296 aa11.59□□□□□ -0.55
NEDD1-213ENST00000557644 RNF125Q96EQ8 232 aa11.59□□□□□ -0.55
NEDD1-213ENST00000557644 GGTLC1Q9BX51 225 aa11.59□□□□□ -0.55
NEDD1-213ENST00000557644 WDR61Q9GZS3 305 aaKnown RBP11.59□□□□□ -0.55
NEDD1-213ENST00000557644 SLC45A2Q9UMX9 530 aa11.59□□□□□ -0.55
NEDD1-213ENST00000557644 IGHV3-66A0A0C4DH42 116 aa11.59□□□□□ -0.55
NEDD1-213ENST00000557644 HMSDA8MTL9 139 aa11.59□□□□□ -0.55
NEDD1-213ENST00000557644 G3V4G9 280 aa11.59□□□□□ -0.55
NEDD1-213ENST00000557644 FABP1P07148 127 aa11.59□□□□□ -0.55
NEDD1-213ENST00000557644 K7EMT4 169 aa11.58□□□□□ -0.56
NEDD1-213ENST00000557644 DFFBO76075 338 aa11.58□□□□□ -0.56
NEDD1-213ENST00000557644 CXCL2P19875 107 aa11.58□□□□□ -0.56
NEDD1-213ENST00000557644 ELLP55199 621 aaPredicted RBP11.58□□□□□ -0.56
NEDD1-213ENST00000557644 MIC13Q5XKP0 118 aa11.58□□□□□ -0.56
NEDD1-213ENST00000557644 GINS3Q9BRX5 216 aa11.58□□□□□ -0.56
NEDD1-213ENST00000557644 MCRIP2Q9BUT9 160 aaKnown RBP11.58□□□□□ -0.56
NEDD1-213ENST00000557644 NPCDR1Q9BY65 106 aa11.58□□□□□ -0.56
NEDD1-213ENST00000557644 C1QBP02746 253 aa11.57□□□□□ -0.56
NEDD1-213ENST00000557644 LINC00869P0C866 280 aa11.57□□□□□ -0.56
NEDD1-213ENST00000557644 ORM2P19652 201 aa11.57□□□□□ -0.56
NEDD1-213ENST00000557644 STPG3Q8N7X2 389 aa11.57□□□□□ -0.56
NEDD1-213ENST00000557644 DOK5Q9P104 306 aa11.57□□□□□ -0.56
NEDD1-213ENST00000557644 MLXQ9UH92 298 aa11.57□□□□□ -0.56
NEDD1-213ENST00000557644 RFNGQ9Y644 331 aa11.57□□□□□ -0.56
NEDD1-213ENST00000557644 IGHV7-4-1A0A0J9YVY3 117 aa11.57□□□□□ -0.56
NEDD1-213ENST00000557644 C8orf88P0DMB2 117 aa11.57□□□□□ -0.56
NEDD1-213ENST00000557644 EIF2B2P49770 351 aaKnown RBP11.57□□□□□ -0.56
NEDD1-213ENST00000557644 SELENOTP62341 195 aa11.57□□□□□ -0.56
NEDD1-213ENST00000557644 RAB31Q13636 194 aa11.57□□□□□ -0.56
NEDD1-213ENST00000557644 C9orf66Q5T8R8 295 aa11.57□□□□□ -0.56
NEDD1-213ENST00000557644 METTL26Q96S19 204 aa11.57□□□□□ -0.56
NEDD1-213ENST00000557644 RSG1Q9BU20 258 aa11.57□□□□□ -0.56
NEDD1-213ENST00000557644 IFNA5P01569 189 aa11.56□□□□□ -0.56
NEDD1-213ENST00000557644 NPPCP23582 126 aa11.56□□□□□ -0.56
NEDD1-213ENST00000557644 CRYBB3P26998 211 aa11.56□□□□□ -0.56
NEDD1-213ENST00000557644 OR1B1Q8NGR6 318 aa11.56□□□□□ -0.56
NEDD1-213ENST00000557644 RHPN1-AS1Q9BWJ2 59 aa11.56□□□□□ -0.56
NEDD1-213ENST00000557644 MRPL27Q9P0M9 148 aaKnown RBP11.56□□□□□ -0.56
NEDD1-213ENST00000557644 SMPXQ9UHP9 88 aa11.56□□□□□ -0.56
NEDD1-213ENST00000557644 MPDU1O75352 247 aa11.56□□□□□ -0.56
NEDD1-213ENST00000557644 PRR20EP86478 221 aa11.56□□□□□ -0.56
NEDD1-213ENST00000557644 PRR20CP86479 221 aa11.56□□□□□ -0.56
NEDD1-213ENST00000557644 PRR20DP86480 221 aa11.56□□□□□ -0.56
NEDD1-213ENST00000557644 PRR20BP86481 221 aa11.56□□□□□ -0.56
NEDD1-213ENST00000557644 PRR20AP86496 221 aa11.56□□□□□ -0.56
NEDD1-213ENST00000557644 OPCMLQ14982 345 aa11.56□□□□□ -0.56
NEDD1-213ENST00000557644 RPL7L1Q6DKI1 246 aaKnown RBP11.56□□□□□ -0.56
NEDD1-213ENST00000557644 ST8SIA2Q92186 375 aa11.56□□□□□ -0.56
NEDD1-213ENST00000557644 ARL6Q9H0F7 186 aa11.56□□□□□ -0.56
NEDD1-213ENST00000557644 SIGLEC8Q9NYZ4 499 aa11.56□□□□□ -0.56
NEDD1-213ENST00000557644 CHEK1O14757 476 aa11.55□□□□□ -0.56
NEDD1-213ENST00000557644 ZNF345Q14585 488 aa11.55□□□□□ -0.56
NEDD1-213ENST00000557644 KCNRGQ8N5I3 272 aa11.55□□□□□ -0.56
NEDD1-213ENST00000557644 SCGB1C1Q8TD33 95 aa11.55□□□□□ -0.56
NEDD1-213ENST00000557644 DYNLRB2Q8TF09 96 aa11.55□□□□□ -0.56
NEDD1-213ENST00000557644 RNF2Q99496 336 aa11.55□□□□□ -0.56
NEDD1-213ENST00000557644 RABAC1Q9UI14 185 aa11.55□□□□□ -0.56
NEDD1-213ENST00000557644 PXMP4Q9Y6I8 212 aa11.55□□□□□ -0.56
NEDD1-213ENST00000557644 IGLV1-51P01701 117 aa11.55□□□□□ -0.56
NEDD1-213ENST00000557644 RPL29P47914 159 aaKnown RBP11.55□□□□□ -0.56
NEDD1-213ENST00000557644 B2MP61769 119 aa11.55□□□□□ -0.56
NEDD1-213ENST00000557644 ZNF266Q14584 549 aa11.55□□□□□ -0.56
NEDD1-213ENST00000557644 DEFB114Q30KQ6 69 aa11.55□□□□□ -0.56
NEDD1-213ENST00000557644 CD300EQ496F6 205 aaPredicted RBP11.55□□□□□ -0.56
NEDD1-213ENST00000557644 SAMD5Q5TGI4 173 aa11.55□□□□□ -0.56
NEDD1-213ENST00000557644 MARC2Q969Z3 335 aa11.55□□□□□ -0.56
NEDD1-213ENST00000557644 UHRF2Q96PU4 802 aa11.55□□□□□ -0.56
NEDD1-213ENST00000557644 IZUMO1RA6ND01 250 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms