RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 ZNF486Q96H40 463 aaPredicted RBP10.05□□□□□ -0.8
SLIRP-210ENST00000557431 ACY3Q96HD9 319 aa10.05□□□□□ -0.8
SLIRP-210ENST00000557431 HEYLQ9NQ87 328 aaPredicted RBP10.05□□□□□ -0.8
SLIRP-210ENST00000557431 TRAV30A0A087WSZ9 112 aa10.04□□□□□ -0.8
SLIRP-210ENST00000557431 FABP12A6NFH5 140 aa10.04□□□□□ -0.8
SLIRP-210ENST00000557431 IFNA10P01566 189 aa10.04□□□□□ -0.8
SLIRP-210ENST00000557431 OR51G1Q8NGK1 321 aa10.04□□□□□ -0.8
SLIRP-210ENST00000557431 NPIPB3Q92617 1050 aa10.04□□□□□ -0.8
SLIRP-210ENST00000557431 PRR13Q9NZ81 148 aa10.04□□□□□ -0.8
SLIRP-210ENST00000557431 CACNG5Q9UF02 275 aa10.04□□□□□ -0.8
SLIRP-210ENST00000557431 RPS10-NUDT3A0A1W2PQS6 291 aa10.03□□□□□ -0.8
SLIRP-210ENST00000557431 BUB3O43684 328 aa10.03□□□□□ -0.8
SLIRP-210ENST00000557431 HLA-DRB4P13762 266 aa10.03□□□□□ -0.8
SLIRP-210ENST00000557431 NPY1RP25929 384 aa10.03□□□□□ -0.8
SLIRP-210ENST00000557431 EIF2B2P49770 351 aaKnown RBP10.03□□□□□ -0.8
SLIRP-210ENST00000557431 SPCS3P61009 180 aa10.03□□□□□ -0.8
SLIRP-210ENST00000557431 LGALS9BQ3B8N2 356 aa10.03□□□□□ -0.8
SLIRP-210ENST00000557431 ZNF705AQ6ZN79 300 aaPredicted RBP10.03□□□□□ -0.8
SLIRP-210ENST00000557431 Q6ZR54 194 aa10.03□□□□□ -0.8
SLIRP-210ENST00000557431 SLC24A4Q8NFF2 622 aa10.03□□□□□ -0.8
SLIRP-210ENST00000557431 GPR146Q96CH1 333 aa10.03□□□□□ -0.8
SLIRP-210ENST00000557431 LINC00052Q96N35 136 aa10.03□□□□□ -0.8
SLIRP-210ENST00000557431 C1QTNF4Q9BXJ3 329 aa10.03□□□□□ -0.8
SLIRP-210ENST00000557431 WDR12Q9GZL7 423 aaKnown RBP10.03□□□□□ -0.8
SLIRP-210ENST00000557431 SLC35B3Q9H1N7 401 aa10.03□□□□□ -0.8
SLIRP-210ENST00000557431 NRN1Q9NPD7 142 aa10.03□□□□□ -0.8
SLIRP-210ENST00000557431 HLA-DRB4X5D2U9 266 aa10.03□□□□□ -0.8
SLIRP-210ENST00000557431 ANKRD20A5PA0PJZ0 165 aa10.02□□□□□ -0.81
SLIRP-210ENST00000557431 CEBPZOSA8MTT3 80 aa10.02□□□□□ -0.81
SLIRP-210ENST00000557431 ZNF705FA8MVS1 300 aaPredicted RBP10.02□□□□□ -0.81
SLIRP-210ENST00000557431 DISC1C4P0D8 188 aa10.02□□□□□ -0.81
SLIRP-210ENST00000557431 F6UB75 175 aa10.02□□□□□ -0.81
SLIRP-210ENST00000557431 SCGB2A1O75556 95 aa10.02□□□□□ -0.81
SLIRP-210ENST00000557431 ATG12O94817 140 aa10.02□□□□□ -0.81
SLIRP-210ENST00000557431 ZNF705DP0CH99 300 aaPredicted RBP10.02□□□□□ -0.81
SLIRP-210ENST00000557431 ZNF705BP0CI00 300 aaPredicted RBP10.02□□□□□ -0.81
SLIRP-210ENST00000557431 AKAIN1P0CW23 69 aa10.02□□□□□ -0.81
SLIRP-210ENST00000557431 PSG1P11464 419 aa10.02□□□□□ -0.81
SLIRP-210ENST00000557431 HTR2BP41595 481 aa10.02□□□□□ -0.81
SLIRP-210ENST00000557431 YPEL3P61236 119 aaPredicted RBP10.02□□□□□ -0.81
SLIRP-210ENST00000557431 NUTF2P61970 127 aaKnown RBP10.02□□□□□ -0.81
SLIRP-210ENST00000557431 SNRPD3P62318 126 aaKnown RBP10.02□□□□□ -0.81
SLIRP-210ENST00000557431 C2orf83Q53S99 150 aa10.02□□□□□ -0.81
SLIRP-210ENST00000557431 FAM222AQ5U5X8 452 aa10.02□□□□□ -0.81
SLIRP-210ENST00000557431 SELENOHQ8IZQ5 122 aaKnown RBP10.02□□□□□ -0.81
SLIRP-210ENST00000557431 CCDC71LQ8N9Z2 235 aa10.02□□□□□ -0.81
SLIRP-210ENST00000557431 OR4C16Q8NGL9 310 aa10.02□□□□□ -0.81
SLIRP-210ENST00000557431 ZFAND1Q8TCF1 268 aa10.02□□□□□ -0.81
SLIRP-210ENST00000557431 PBDC1Q9BVG4 233 aa10.02□□□□□ -0.81
SLIRP-210ENST00000557431 TOMM40O96008 361 aa10.01□□□□□ -0.81
SLIRP-210ENST00000557431 IFNA21P01568 189 aa10.01□□□□□ -0.81
SLIRP-210ENST00000557431 SPART-AS1P0CW21 52 aa10.01□□□□□ -0.81
SLIRP-210ENST00000557431 S100A5P33763 92 aa10.01□□□□□ -0.81
SLIRP-210ENST00000557431 AP2S1P53680 142 aaPredicted RBP10.01□□□□□ -0.81
SLIRP-210ENST00000557431 OR4B1Q8NGF8 309 aa10.01□□□□□ -0.81
SLIRP-210ENST00000557431 GLYATL2Q8WU03 294 aa10.01□□□□□ -0.81
SLIRP-210ENST00000557431 TMEM222Q9H0R3 208 aa10.01□□□□□ -0.81
SLIRP-210ENST00000557431 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.01□□□□□ -0.81
SLIRP-210ENST00000557431 DKK2Q9UBU2 259 aa10.01□□□□□ -0.81
SLIRP-210ENST00000557431 V9GYH0 126 aa10.01□□□□□ -0.81
SLIRP-210ENST00000557431 PRM2P04554 102 aa10□□□□□ -0.81
SLIRP-210ENST00000557431 SLC25A4P12235 298 aa10□□□□□ -0.81
SLIRP-210ENST00000557431 SURF2Q15527 256 aaPredicted RBP10□□□□□ -0.81
SLIRP-210ENST00000557431 TMEM268Q5VZI3 342 aa10□□□□□ -0.81
SLIRP-210ENST00000557431 CCDC190Q86UF4 302 aa10□□□□□ -0.81
SLIRP-210ENST00000557431 ZNF709Q8N972 641 aa10□□□□□ -0.81
SLIRP-210ENST00000557431 NIPSNAP3BQ9BS92 247 aa10□□□□□ -0.81
SLIRP-210ENST00000557431 RTBDNQ9BSG5 229 aaPredicted RBP10□□□□□ -0.81
SLIRP-210ENST00000557431 NAA60Q9H7X0 242 aa10□□□□□ -0.81
SLIRP-210ENST00000557431 TEX13DA0A0J9YY54 714 aaPredicted RBP9.99□□□□□ -0.81
SLIRP-210ENST00000557431 CDS2O95674 445 aa9.99□□□□□ -0.81
SLIRP-210ENST00000557431 RD3LP0DJH9 198 aa9.99□□□□□ -0.81
SLIRP-210ENST00000557431 NKX2-1P43699 371 aaPredicted RBP9.99□□□□□ -0.81
SLIRP-210ENST00000557431 ZNF90Q03938 601 aa9.99□□□□□ -0.81
SLIRP-210ENST00000557431 ZNF79Q15937 498 aa9.99□□□□□ -0.81
SLIRP-210ENST00000557431 AARDQ4LEZ3 155 aa9.99□□□□□ -0.81
SLIRP-210ENST00000557431 PYDC2Q56P42 97 aa9.99□□□□□ -0.81
SLIRP-210ENST00000557431 TMEM88Q6PEY1 159 aa9.99□□□□□ -0.81
SLIRP-210ENST00000557431 C1orf158Q8N1D5 194 aa9.99□□□□□ -0.81
SLIRP-210ENST00000557431 OR51S1Q8NGJ8 323 aa9.99□□□□□ -0.81
SLIRP-210ENST00000557431 OR52E5Q8NH55 327 aa9.99□□□□□ -0.81
SLIRP-210ENST00000557431 RNASEH2CQ8TDP1 164 aaKnown RBP9.99□□□□□ -0.81
SLIRP-210ENST00000557431 RBPMSQ93062 196 aaKnown RBP9.99□□□□□ -0.81
SLIRP-210ENST00000557431 RNF125Q96EQ8 232 aa9.99□□□□□ -0.81
SLIRP-210ENST00000557431 NEU1Q99519 415 aa9.99□□□□□ -0.81
SLIRP-210ENST00000557431 PRRT1Q99946 306 aa9.99□□□□□ -0.81
SLIRP-210ENST00000557431 SAV1Q9H4B6 383 aaPredicted RBP9.99□□□□□ -0.81
SLIRP-210ENST00000557431 NDUFA13Q9P0J0 144 aa9.99□□□□□ -0.81
SLIRP-210ENST00000557431 GPR132Q9UNW8 380 aa9.99□□□□□ -0.81
SLIRP-210ENST00000557431 YTHDF2Q9Y5A9 579 aaKnown RBP9.99□□□□□ -0.81
SLIRP-210ENST00000557431 RFNGQ9Y644 331 aa9.99□□□□□ -0.81
SLIRP-210ENST00000557431 LOC102723971A0A1B0GUV8 181 aa9.98□□□□□ -0.81
SLIRP-210ENST00000557431 B3GALNT1O75752 331 aa9.98□□□□□ -0.81
SLIRP-210ENST00000557431 TRIM63Q969Q1 353 aa9.98□□□□□ -0.81
SLIRP-210ENST00000557431 C14orf166Q9Y224 244 aaKnown RBP9.98□□□□□ -0.81
SLIRP-210ENST00000557431 LRP1BQ9NZR2 4599 aa9.98□□□□□ -0.81
SLIRP-210ENST00000557431 IGKV1D-37A0A075B6S9 117 aa9.97□□□□□ -0.81
SLIRP-210ENST00000557431 SOCS3O14543 225 aa9.97□□□□□ -0.81
SLIRP-210ENST00000557431 LYZP61626 148 aa9.97□□□□□ -0.81
SLIRP-210ENST00000557431 TNP2Q05952 138 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms