RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 S100A7P31151 101 aa10.34□□□□□ -0.75
VPS33B-206ENST00000557358 APOC4P55056 127 aa10.34□□□□□ -0.75
VPS33B-206ENST00000557358 RAP2BP61225 183 aa10.34□□□□□ -0.75
VPS33B-206ENST00000557358 AKAP14Q86UN6 197 aa10.34□□□□□ -0.75
VPS33B-206ENST00000557358 MAGT1Q9H0U3 335 aa10.34□□□□□ -0.75
VPS33B-206ENST00000557358 VSIRQ9H7M9 311 aa10.34□□□□□ -0.75
VPS33B-206ENST00000557358 ZFAND3Q9H8U3 227 aa10.34□□□□□ -0.75
VPS33B-206ENST00000557358 STRAPQ9Y3F4 350 aaKnown RBP10.34□□□□□ -0.75
VPS33B-206ENST00000557358 COL7A1Q02388 2944 aa10.34□□□□□ -0.75
VPS33B-206ENST00000557358 HELTA6NFD8 242 aa10.33□□□□□ -0.76
VPS33B-206ENST00000557358 CCNKO75909 580 aa10.33□□□□□ -0.76
VPS33B-206ENST00000557358 IGKV1-17P01599 117 aa10.33□□□□□ -0.76
VPS33B-206ENST00000557358 HNRNPCP07910 306 aaKnown RBP eCLIP10.33□□□□□ -0.76
VPS33B-206ENST00000557358 TFPI2P48307 235 aa10.33□□□□□ -0.76
VPS33B-206ENST00000557358 AP2S1P53680 142 aaPredicted RBP10.33□□□□□ -0.76
VPS33B-206ENST00000557358 S100A10P60903 97 aa10.33□□□□□ -0.76
VPS33B-206ENST00000557358 IL15RAQ13261 267 aa10.33□□□□□ -0.76
VPS33B-206ENST00000557358 SPANXN5Q5MJ07 72 aa10.33□□□□□ -0.76
VPS33B-206ENST00000557358 ST8SIA2Q92186 375 aa10.33□□□□□ -0.76
VPS33B-206ENST00000557358 WFDC10AQ9H1F0 79 aa10.33□□□□□ -0.76
VPS33B-206ENST00000557358 MRPL36Q9P0J6 103 aaKnown RBP10.33□□□□□ -0.76
VPS33B-206ENST00000557358 UBQLN2Q9UHD9 624 aa10.33□□□□□ -0.76
VPS33B-206ENST00000557358 RABAC1Q9UI14 185 aa10.33□□□□□ -0.76
VPS33B-206ENST00000557358 TRAV2A0A0B4J234 112 aa10.32□□□□□ -0.76
VPS33B-206ENST00000557358 IGHV3-66A0A0C4DH42 116 aa10.32□□□□□ -0.76
VPS33B-206ENST00000557358 TOMM40O96008 361 aa10.32□□□□□ -0.76
VPS33B-206ENST00000557358 CFDP00746 253 aaPredicted RBP10.32□□□□□ -0.76
VPS33B-206ENST00000557358 MBPP02686 304 aaPredicted RBP10.32□□□□□ -0.76
VPS33B-206ENST00000557358 IL4P05112 153 aa10.32□□□□□ -0.76
VPS33B-206ENST00000557358 CRYBB3P26998 211 aa10.32□□□□□ -0.76
VPS33B-206ENST00000557358 LRRC37A5PQ49AS3 106 aa10.32□□□□□ -0.76
VPS33B-206ENST00000557358 WFDC3Q8IUB2 231 aa10.32□□□□□ -0.76
VPS33B-206ENST00000557358 GBGT1Q8N5D6 347 aa10.32□□□□□ -0.76
VPS33B-206ENST00000557358 OR51G1Q8NGK1 321 aa10.32□□□□□ -0.76
VPS33B-206ENST00000557358 TMEM170AQ8WVE7 144 aa10.32□□□□□ -0.76
VPS33B-206ENST00000557358 PPP1R1CQ8WVI7 109 aa10.32□□□□□ -0.76
VPS33B-206ENST00000557358 ST6GAL2Q96JF0 529 aa10.32□□□□□ -0.76
VPS33B-206ENST00000557358 LSM5Q9Y4Y9 91 aaKnown RBP10.32□□□□□ -0.76
VPS33B-206ENST00000557358 DNAH9Q9NYC9 4486 aa10.32□□□□□ -0.76
VPS33B-206ENST00000557358 RBMY1BA6NDE4 496 aaKnown RBP10.31□□□□□ -0.76
VPS33B-206ENST00000557358 RBMY1EA6NEQ0 496 aaKnown RBP10.31□□□□□ -0.76
VPS33B-206ENST00000557358 C3orf84H3BNL1 204 aa10.31□□□□□ -0.76
VPS33B-206ENST00000557358 K7EPK0 472 aa10.31□□□□□ -0.76
VPS33B-206ENST00000557358 UBE2CO00762 179 aa10.31□□□□□ -0.76
VPS33B-206ENST00000557358 DFFBO76075 338 aa10.31□□□□□ -0.76
VPS33B-206ENST00000557358 RBMY1DP0C7P1 496 aaKnown RBP10.31□□□□□ -0.76
VPS33B-206ENST00000557358 PET100P0DJ07 73 aa10.31□□□□□ -0.76
VPS33B-206ENST00000557358 P2RY1P47900 373 aa10.31□□□□□ -0.76
VPS33B-206ENST00000557358 ID3Q02535 119 aa10.31□□□□□ -0.76
VPS33B-206ENST00000557358 AKR1C1Q04828 323 aa10.31□□□□□ -0.76
VPS33B-206ENST00000557358 RAB32Q13637 225 aa10.31□□□□□ -0.76
VPS33B-206ENST00000557358 GAMTQ14353 236 aa10.31□□□□□ -0.76
VPS33B-206ENST00000557358 STXBP6Q8NFX7 210 aa10.31□□□□□ -0.76
VPS33B-206ENST00000557358 OR2T35Q8NGX2 323 aa10.31□□□□□ -0.76
VPS33B-206ENST00000557358 PPP1R14BQ96C90 147 aa10.31□□□□□ -0.76
VPS33B-206ENST00000557358 RAB40CQ96S21 281 aa10.31□□□□□ -0.76
VPS33B-206ENST00000557358 PSENENQ9NZ42 101 aa10.31□□□□□ -0.76
VPS33B-206ENST00000557358 RCL1Q9Y2P8 373 aaKnown RBP10.31□□□□□ -0.76
VPS33B-206ENST00000557358 L7N2F9 121 aa10.3□□□□□ -0.76
VPS33B-206ENST00000557358 SSSCA1O60232 199 aa10.3□□□□□ -0.76
VPS33B-206ENST00000557358 MPC2O95563 127 aa10.3□□□□□ -0.76
VPS33B-206ENST00000557358 POLR2GP62487 172 aaKnown RBP eCLIP10.3□□□□□ -0.76
VPS33B-206ENST00000557358 VAMP2P63027 116 aa10.3□□□□□ -0.76
VPS33B-206ENST00000557358 FGL1Q08830 312 aa10.3□□□□□ -0.76
VPS33B-206ENST00000557358 FAM90A2PQ658T7 463 aa10.3□□□□□ -0.76
VPS33B-206ENST00000557358 LINC00322Q6ZN03 302 aaPredicted RBP10.3□□□□□ -0.76
VPS33B-206ENST00000557358 STPG3Q8N7X2 389 aa10.3□□□□□ -0.76
VPS33B-206ENST00000557358 CITED4Q96RK1 184 aa10.3□□□□□ -0.76
VPS33B-206ENST00000557358 PBDC1Q9BVG4 233 aa10.3□□□□□ -0.76
VPS33B-206ENST00000557358 MS4A6AQ9H2W1 248 aa10.3□□□□□ -0.76
VPS33B-206ENST00000557358 KIR2DL5BA0A0G2JN68 375 aa10.29□□□□□ -0.76
VPS33B-206ENST00000557358 KIR2DL5BA0A0G2JPC4 375 aa10.29□□□□□ -0.76
VPS33B-206ENST00000557358 PFDN1O60925 122 aa10.29□□□□□ -0.76
VPS33B-206ENST00000557358 APOHP02749 345 aaPredicted RBP10.29□□□□□ -0.76
VPS33B-206ENST00000557358 RLN2P04090 185 aa10.29□□□□□ -0.76
VPS33B-206ENST00000557358 PSG1P11464 419 aa10.29□□□□□ -0.76
VPS33B-206ENST00000557358 PVALBP20472 110 aaPredicted RBP10.29□□□□□ -0.76
VPS33B-206ENST00000557358 ODF3L2Q3SX64 289 aa10.29□□□□□ -0.76
VPS33B-206ENST00000557358 OR8G2PQ6IF36 304 aa10.29□□□□□ -0.76
VPS33B-206ENST00000557358 S100A7AQ86SG5 101 aa10.29□□□□□ -0.76
VPS33B-206ENST00000557358 TCTE3Q8IZS6 198 aa10.29□□□□□ -0.76
VPS33B-206ENST00000557358 KIR2DL5AQ8N109 375 aa10.29□□□□□ -0.76
VPS33B-206ENST00000557358 KIR2DL5BQ8NHK3 375 aa10.29□□□□□ -0.76
VPS33B-206ENST00000557358 IL17DQ8TAD2 202 aa10.29□□□□□ -0.76
VPS33B-206ENST00000557358 RNF125Q96EQ8 232 aa10.29□□□□□ -0.76
VPS33B-206ENST00000557358 TRGV9Q99603 122 aa10.29□□□□□ -0.76
VPS33B-206ENST00000557358 SMCO3A2RU48 225 aa10.28□□□□□ -0.76
VPS33B-206ENST00000557358 H3BP45 60 aa10.28□□□□□ -0.76
VPS33B-206ENST00000557358 DEDDO75618 318 aa10.28□□□□□ -0.76
VPS33B-206ENST00000557358 TAS2R30P59541 319 aa10.28□□□□□ -0.76
VPS33B-206ENST00000557358 LYZP61626 148 aa10.28□□□□□ -0.76
VPS33B-206ENST00000557358 OR10P1Q8NGE3 313 aa10.28□□□□□ -0.76
VPS33B-206ENST00000557358 MUC7Q8TAX7 377 aa10.28□□□□□ -0.76
VPS33B-206ENST00000557358 THAP6Q8TBB0 222 aa10.28□□□□□ -0.76
VPS33B-206ENST00000557358 SMIM8Q96KF7 97 aa10.28□□□□□ -0.76
VPS33B-206ENST00000557358 OR5AC2Q9NZP5 309 aa10.28□□□□□ -0.76
VPS33B-206ENST00000557358 MBD2Q9UBB5 411 aa10.28□□□□□ -0.76
VPS33B-206ENST00000557358 FBXL17Q9UF56 701 aa10.28□□□□□ -0.76
VPS33B-206ENST00000557358 E5RGE8 158 aa10.27□□□□□ -0.77
VPS33B-206ENST00000557358 G3V3Q6 166 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms