RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 HSBP1O75506 76 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 SOX14O95416 240 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 IGLC1P0CG04 106 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 PGA5P0DJD9 388 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 ALOX5APP20292 161 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 TNFRSF1BP20333 461 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 COX7A1P24310 79 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 NPY1RP25929 384 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 FAUP35544 74 aaKnown RBP3.83□□□□□ -1.8
ATXN3-247ENST00000557311 OR1E2P47887 323 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 SLC25A1P53007 311 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 CRYBA2P53672 197 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 TPPP2P59282 170 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 SOHLH1Q5JUK2 328 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 GLYATL3Q5SZD4 288 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 TMEM78Q5T7P6 136 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 AADACL3Q5VUY0 350 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 AMMECR1LQ6DCA0 310 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 ZNF343Q6P1L6 599 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 KCTD18Q6PI47 426 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-247ENST00000557311 WDR86Q86TI4 376 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 FAM219AQ8IW50 185 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 DYNAPQ8N1N2 210 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 ZNF709Q8N972 641 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 SUMF2Q8NBJ7 301 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 OR6N2Q8NGY6 317 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 KIR2DL5BQ8NHK3 375 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 FLYWCH2Q96CP2 140 aaKnown RBP3.83□□□□□ -1.8
ATXN3-247ENST00000557311 SDSLQ96GA7 329 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 ZNF799Q96GE5 643 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 DNAJC30Q96LL9 226 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 GAFA1Q96PS6 74 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 UHRF2Q96PU4 802 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 IMMP2LQ96T52 175 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 GPER1Q99527 375 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 SPAG8Q99932 426 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-247ENST00000557311 NMNAT2Q9BZQ4 307 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 WDR13Q9H1Z4 485 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 EGLN3Q9H6Z9 239 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 PNRC2Q9NPJ4 139 aaKnown RBP3.83□□□□□ -1.8
ATXN3-247ENST00000557311 PARP11Q9NR21 331 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 ZNF319Q9P2F9 582 aa3.83□□□□□ -1.8
ATXN3-247ENST00000557311 A0A087WX48 190 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 IGLV1-36A0A0B4J1U3 117 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 A0A0G2JLM5 398 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 A0A0U1RRA0 63 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 A0A1W2PRE2 83 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 IGLC7A0M8Q6 106 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 ODAMA1E959 279 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 GAGE12JA6NER3 117 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 F8VVB4 439 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 F8VWA3 439 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 GSTZ1O43708 216 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-247ENST00000557311 GAGE7O76087 117 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 DIRAS1O95057 198 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 NDUFB2O95178 105 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 HLA-AP01891 365 aaKnown RBP3.82□□□□□ -1.8
ATXN3-247ENST00000557311 FCGR3AP08637 254 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 CXCL1P09341 107 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 GAGE12FP0CL80 117 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 GAGE12GP0CL81 117 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 GAGE12IP0CL82 117 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 HIST1H1CP16403 213 aaKnown RBP3.82□□□□□ -1.8
ATXN3-247ENST00000557311 ZNF823P16415 610 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 GNB3P16520 340 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 ELK1P19419 428 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 FGF9P31371 208 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-247ENST00000557311 CDKN2AP42771 156 aaKnown RBP3.82□□□□□ -1.8
ATXN3-247ENST00000557311 GLIPR1P48060 266 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 GZMMP51124 257 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 MTPNP58546 118 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 RPL31P62899 125 aaKnown RBP3.82□□□□□ -1.8
ATXN3-247ENST00000557311 RPL8P62917 257 aaKnown RBP3.82□□□□□ -1.8
ATXN3-247ENST00000557311 GAGE4Q13068 117 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 SPHARQ15513 63 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 TDRG1Q3Y452 100 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 SPATA45Q537H7 98 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 TMEM97Q5BJF2 176 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 FAM162BQ5T6X4 162 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 ZFAND6Q6FIF0 208 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 C16orf82Q7Z2V1 217 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 NRACQ8N912 160 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 ZNF485Q8NCK3 441 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 ZNRF1Q8ND25 227 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 OR11H6Q8NGC7 330 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 THEM6Q8WUY1 208 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 TSSK2Q96PF2 358 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 GPX7Q96SL4 187 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-247ENST00000557311 HSPB9Q9BQS6 159 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 GABARAPL3Q9BY60 117 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 EIF5A2Q9GZV4 153 aaKnown RBP3.82□□□□□ -1.8
ATXN3-247ENST00000557311 SLC35B3Q9H1N7 401 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 IER3IP1Q9Y5U9 82 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 SIRT4Q9Y6E7 314 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-247ENST00000557311 SMAD5-AS1Q9Y6J3 95 aa3.82□□□□□ -1.8
ATXN3-247ENST00000557311 COL7A1Q02388 2944 aa3.81□□□□□ -1.8
ATXN3-247ENST00000557311 IGKV1D-17A0A075B6S4 117 aa3.81□□□□□ -1.8
ATXN3-247ENST00000557311 A0A087WUU8 490 aa3.81□□□□□ -1.8
ATXN3-247ENST00000557311 IGHV2-26A0A0B4J1V2 119 aa3.81□□□□□ -1.8
ATXN3-247ENST00000557311 IRGMA1A4Y4 181 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms