RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 PBDC1Q9BVG4 233 aa13.29□□□□□ -0.28
XRCC3-217ENST00000556980 STRAPQ9Y3F4 350 aaKnown RBP13.29□□□□□ -0.28
XRCC3-217ENST00000556980 H3BP45 60 aa13.28□□□□□ -0.28
XRCC3-217ENST00000556980 TCRBP04435 133 aa13.28□□□□□ -0.28
XRCC3-217ENST00000556980 NKX2-1P43699 371 aaPredicted RBP13.28□□□□□ -0.28
XRCC3-217ENST00000556980 DEFB131AP59861 70 aa13.28□□□□□ -0.28
XRCC3-217ENST00000556980 POLR2GP62487 172 aaKnown RBP eCLIP13.28□□□□□ -0.28
XRCC3-217ENST00000556980 ID3Q02535 119 aa13.28□□□□□ -0.28
XRCC3-217ENST00000556980 C16orf54Q6UWD8 224 aa13.28□□□□□ -0.28
XRCC3-217ENST00000556980 MITD1Q8WV92 249 aa13.28□□□□□ -0.28
XRCC3-217ENST00000556980 S100ZQ8WXG8 99 aa13.28□□□□□ -0.28
XRCC3-217ENST00000556980 RNF125Q96EQ8 232 aa13.28□□□□□ -0.28
XRCC3-217ENST00000556980 TP53TG1Q9Y2A0 90 aa13.28□□□□□ -0.28
XRCC3-217ENST00000556980 IGKV1D-37A0A075B6S9 117 aa13.27□□□□□ -0.29
XRCC3-217ENST00000556980 TRAV6A0A075B6T7 132 aa13.27□□□□□ -0.29
XRCC3-217ENST00000556980 K7EQG2 157 aa13.27□□□□□ -0.29
XRCC3-217ENST00000556980 SPRY2O43597 315 aa13.27□□□□□ -0.29
XRCC3-217ENST00000556980 SSSCA1O60232 199 aa13.27□□□□□ -0.29
XRCC3-217ENST00000556980 SCGB1D2O95969 90 aa13.27□□□□□ -0.29
XRCC3-217ENST00000556980 NUP62P37198 522 aaPredicted RBP13.27□□□□□ -0.29
XRCC3-217ENST00000556980 AP2S1P53680 142 aaPredicted RBP13.27□□□□□ -0.29
XRCC3-217ENST00000556980 ZNF90Q03938 601 aa13.27□□□□□ -0.29
XRCC3-217ENST00000556980 IAH1Q2TAA2 248 aaPredicted RBP13.27□□□□□ -0.29
XRCC3-217ENST00000556980 LEMD1Q68G75 181 aa13.27□□□□□ -0.29
XRCC3-217ENST00000556980 FAM24BQ8N5W8 94 aa13.27□□□□□ -0.29
XRCC3-217ENST00000556980 OR4D5Q8NGN0 318 aa13.27□□□□□ -0.29
XRCC3-217ENST00000556980 IL17DQ8TAD2 202 aa13.27□□□□□ -0.29
XRCC3-217ENST00000556980 GLMPQ8WWB7 406 aa13.27□□□□□ -0.29
XRCC3-217ENST00000556980 NUDT15Q9NV35 164 aa13.27□□□□□ -0.29
XRCC3-217ENST00000556980 PFDN2Q9UHV9 154 aa13.27□□□□□ -0.29
XRCC3-217ENST00000556980 OR8G2PQ6IF36 304 aa13.26□□□□□ -0.29
XRCC3-217ENST00000556980 TRGV9Q99603 122 aa13.26□□□□□ -0.29
XRCC3-217ENST00000556980 CSTL1Q9H114 145 aa13.26□□□□□ -0.29
XRCC3-217ENST00000556980 A6NHS1 94 aa13.25□□□□□ -0.29
XRCC3-217ENST00000556980 SNRPGP15A8MWD9 76 aa13.25□□□□□ -0.29
XRCC3-217ENST00000556980 PRSS46E5RG02 174 aa13.25□□□□□ -0.29
XRCC3-217ENST00000556980 BUB3O43684 328 aa13.25□□□□□ -0.29
XRCC3-217ENST00000556980 ZNF688P0C7X2 276 aa13.25□□□□□ -0.29
XRCC3-217ENST00000556980 LYZP61626 148 aa13.25□□□□□ -0.29
XRCC3-217ENST00000556980 AKR1C1Q04828 323 aa13.25□□□□□ -0.29
XRCC3-217ENST00000556980 OR2F1Q13607 317 aa13.25□□□□□ -0.29
XRCC3-217ENST00000556980 MZT2BQ6NZ67 158 aa13.25□□□□□ -0.29
XRCC3-217ENST00000556980 DCANP1Q8TF63 244 aa13.25□□□□□ -0.29
XRCC3-217ENST00000556980 PSENENQ9NZ42 101 aa13.25□□□□□ -0.29
XRCC3-217ENST00000556980 GSKIPQ9P0R6 139 aa13.25□□□□□ -0.29
XRCC3-217ENST00000556980 SIGLEC15Q6ZMC9 328 aa13.24□□□□□ -0.29
XRCC3-217ENST00000556980 ACOT7LQ6ZUV0 252 aa13.24□□□□□ -0.29
XRCC3-217ENST00000556980 THAP8Q8NA92 274 aa13.24□□□□□ -0.29
XRCC3-217ENST00000556980 ZBTB8BQ8NAP8 495 aaPredicted RBP13.24□□□□□ -0.29
XRCC3-217ENST00000556980 RNF183Q96D59 192 aa13.24□□□□□ -0.29
XRCC3-217ENST00000556980 KMT2CQ8NEZ4 4911 aaKnown RBP13.24□□□□□ -0.29
XRCC3-217ENST00000556980 IGKV1OR2-108A0A075B7D4 117 aa13.23□□□□□ -0.29
XRCC3-217ENST00000556980 FAM240BA0A1B0GVZ2 78 aa13.23□□□□□ -0.29
XRCC3-217ENST00000556980 ZNF846Q147U1 533 aa13.23□□□□□ -0.29
XRCC3-217ENST00000556980 STHQ8IWL8 128 aa13.23□□□□□ -0.29
XRCC3-217ENST00000556980 ZNF431Q8TF32 576 aaPredicted RBP13.23□□□□□ -0.29
XRCC3-217ENST00000556980 PPP1R14BQ96C90 147 aa13.23□□□□□ -0.29
XRCC3-217ENST00000556980 SMIM8Q96KF7 97 aa13.23□□□□□ -0.29
XRCC3-217ENST00000556980 SEC22CQ9BRL7 303 aa13.23□□□□□ -0.29
XRCC3-217ENST00000556980 WDR12Q9GZL7 423 aaKnown RBP13.23□□□□□ -0.29
XRCC3-217ENST00000556980 NRN1Q9NPD7 142 aa13.23□□□□□ -0.29
XRCC3-217ENST00000556980 PTTG2Q9NZH5 202 aa13.23□□□□□ -0.29
XRCC3-217ENST00000556980 SMCO3A2RU48 225 aa13.22□□□□□ -0.29
XRCC3-217ENST00000556980 CCSO14618 274 aa13.22□□□□□ -0.29
XRCC3-217ENST00000556980 H2AFB2P0C5Z0 115 aa13.22□□□□□ -0.29
XRCC3-217ENST00000556980 RAB40CQ96S21 281 aa13.22□□□□□ -0.29
XRCC3-217ENST00000556980 TBC1D24Q9ULP9 559 aa13.22□□□□□ -0.29
XRCC3-217ENST00000556980 A0A0J9YWU9 116 aa13.21□□□□□ -0.29
XRCC3-217ENST00000556980 FAM25EA8MYX2 175 aa13.21□□□□□ -0.29
XRCC3-217ENST00000556980 CFDP00746 253 aaPredicted RBP13.21□□□□□ -0.29
XRCC3-217ENST00000556980 CA1P00915 261 aaPredicted RBP13.21□□□□□ -0.29
XRCC3-217ENST00000556980 SNRPD3P62318 126 aaKnown RBP13.21□□□□□ -0.29
XRCC3-217ENST00000556980 ASAH1Q13510 395 aa13.21□□□□□ -0.29
XRCC3-217ENST00000556980 PSMG4Q5JS54 123 aa13.21□□□□□ -0.29
XRCC3-217ENST00000556980 GATAD1Q8WUU5 269 aa13.21□□□□□ -0.29
XRCC3-217ENST00000556980 FBXL17Q9UF56 701 aa13.21□□□□□ -0.29
XRCC3-217ENST00000556980 KNCNA6PVL3 124 aa13.2□□□□□ -0.3
XRCC3-217ENST00000556980 METTL15P1P0C7V9 234 aa13.2□□□□□ -0.3
XRCC3-217ENST00000556980 TAS2R30P59541 319 aa13.2□□□□□ -0.3
XRCC3-217ENST00000556980 ACTL10Q5JWF8 245 aa13.2□□□□□ -0.3
XRCC3-217ENST00000556980 C1orf194Q5T5A4 169 aa13.2□□□□□ -0.3
XRCC3-217ENST00000556980 BPIFCQ8NFQ6 507 aa13.2□□□□□ -0.3
XRCC3-217ENST00000556980 RCL1Q9Y2P8 373 aaKnown RBP13.2□□□□□ -0.3
XRCC3-217ENST00000556980 C5orf51A6NDU8 294 aa13.19□□□□□ -0.3
XRCC3-217ENST00000556980 TSC22D2O75157 780 aa13.19□□□□□ -0.3
XRCC3-217ENST00000556980 UPK1BO75841 260 aa13.19□□□□□ -0.3
XRCC3-217ENST00000556980 MBPP02686 304 aaPredicted RBP13.19□□□□□ -0.3
XRCC3-217ENST00000556980 PAX9P55771 341 aa13.19□□□□□ -0.3
XRCC3-217ENST00000556980 TMEM144Q7Z5S9 345 aa13.19□□□□□ -0.3
XRCC3-217ENST00000556980 TRPT1Q86TN4 253 aaKnown RBP13.19□□□□□ -0.3
XRCC3-217ENST00000556980 C12orf45Q8N5I9 185 aaPredicted RBP13.19□□□□□ -0.3
XRCC3-217ENST00000556980 OR10P1Q8NGE3 313 aa13.19□□□□□ -0.3
XRCC3-217ENST00000556980 L7N2F9 121 aa13.18□□□□□ -0.3
XRCC3-217ENST00000556980 CCNKO75909 580 aa13.18□□□□□ -0.3
XRCC3-217ENST00000556980 RRAS2P62070 204 aaPredicted RBP13.18□□□□□ -0.3
XRCC3-217ENST00000556980 VAMP2P63027 116 aa13.18□□□□□ -0.3
XRCC3-217ENST00000556980 DLK1P80370 383 aa13.18□□□□□ -0.3
XRCC3-217ENST00000556980 TMEM14EPQ6UXP3 125 aa13.18□□□□□ -0.3
XRCC3-217ENST00000556980 OR8I2Q8N0Y5 310 aa13.18□□□□□ -0.3
XRCC3-217ENST00000556980 TMEM217Q8N7C4 229 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms