RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 NUPL2O15504 423 aaKnown RBP18.4■□□□□ 0.54
SIX4-203ENST00000556952 H2AFB1P0C5Y9 115 aa18.4■□□□□ 0.54
SIX4-203ENST00000556952 RD3LP0DJH9 198 aa18.4■□□□□ 0.54
SIX4-203ENST00000556952 GPR183P32249 361 aa18.4■□□□□ 0.54
SIX4-203ENST00000556952 GCSAMLQ5JQS6 135 aa18.4■□□□□ 0.54
SIX4-203ENST00000556952 FAM209BQ5JX69 171 aa18.4■□□□□ 0.54
SIX4-203ENST00000556952 OR1L4Q8NGR5 311 aa18.4■□□□□ 0.54
SIX4-203ENST00000556952 LYPD6BQ8NI32 183 aa18.4■□□□□ 0.54
SIX4-203ENST00000556952 PFDN5Q99471 154 aa18.4■□□□□ 0.54
SIX4-203ENST00000556952 ANK2Q01484 3957 aa18.4■□□□□ 0.54
SIX4-203ENST00000556952 CTXND1A0A1B0GTU2 59 aa18.39■□□□□ 0.53
SIX4-203ENST00000556952 LINC00862A6NCI5 91 aa18.39■□□□□ 0.53
SIX4-203ENST00000556952 CTSGP08311 255 aa18.39■□□□□ 0.53
SIX4-203ENST00000556952 PSG1P11464 419 aa18.39■□□□□ 0.53
SIX4-203ENST00000556952 CDC34P49427 236 aaPredicted RBP18.39■□□□□ 0.53
SIX4-203ENST00000556952 PLP1P60201 277 aa18.39■□□□□ 0.53
SIX4-203ENST00000556952 FAM122CQ6P4D5 195 aa18.39■□□□□ 0.53
SIX4-203ENST00000556952 SPSB3Q6PJ21 355 aa18.39■□□□□ 0.53
SIX4-203ENST00000556952 GATAD1Q8WUU5 269 aa18.39■□□□□ 0.53
SIX4-203ENST00000556952 MED9Q9NWA0 146 aa18.39■□□□□ 0.53
SIX4-203ENST00000556952 TEX46H3BTG2 121 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 TGOLN2O43493 480 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 NDUFA7O95182 113 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 CLEC3BP05452 202 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 RHOBP62745 196 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 ZNF726P1Q15940 193 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 CLEC19AQ6UXS0 136 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 OR51G1Q8NGK1 321 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 MYOZ3Q8TDC0 251 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 MBD3L1Q8WWY6 194 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 RNF2Q99496 336 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 ELOA3CA0A087WX78 387 aaPredicted RBP18.38■□□□□ 0.53
SIX4-203ENST00000556952 A0A1W2PPV4 95 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 COX7A2P2O60397 106 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 HBE1P02100 147 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 C10orf99Q6UWK7 81 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 HRH4Q9H3N8 390 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 SLC25A22Q9H936 323 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 PFDN2Q9UHV9 154 aa18.38■□□□□ 0.53
SIX4-203ENST00000556952 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.37■□□□□ 0.53
SIX4-203ENST00000556952 OR5G3P0C626 314 aa18.37■□□□□ 0.53
SIX4-203ENST00000556952 ZNF343Q6P1L6 599 aa18.37■□□□□ 0.53
SIX4-203ENST00000556952 LCNL1Q6ZST4 164 aa18.37■□□□□ 0.53
SIX4-203ENST00000556952 KLHDC1Q8N7A1 406 aa18.37■□□□□ 0.53
SIX4-203ENST00000556952 Q8WTZ3 238 aa18.37■□□□□ 0.53
SIX4-203ENST00000556952 MRPL32Q9BYC8 188 aaKnown RBP18.37■□□□□ 0.53
SIX4-203ENST00000556952 DNAJC4Q9NNZ3 241 aa18.37■□□□□ 0.53
SIX4-203ENST00000556952 TRAV1-1A0A0B4J248 108 aa18.36■□□□□ 0.53
SIX4-203ENST00000556952 OR2C1O95371 312 aa18.36■□□□□ 0.53
SIX4-203ENST00000556952 ADMP35318 185 aa18.36■□□□□ 0.53
SIX4-203ENST00000556952 SSX7Q7RTT5 188 aa18.36■□□□□ 0.53
SIX4-203ENST00000556952 SFT2D1Q8WV19 159 aa18.36■□□□□ 0.53
SIX4-203ENST00000556952 RAB24Q969Q5 203 aa18.36■□□□□ 0.53
SIX4-203ENST00000556952 CHRDL1Q9BU40 450 aa18.36■□□□□ 0.53
SIX4-203ENST00000556952 MAP1LC3B2A6NCE7 125 aa18.35■□□□□ 0.53
SIX4-203ENST00000556952 FAM78BQ5VT40 261 aa18.35■□□□□ 0.53
SIX4-203ENST00000556952 C10orf113Q5VZT2 155 aa18.35■□□□□ 0.53
SIX4-203ENST00000556952 ZNF600Q6ZNG1 722 aa18.35■□□□□ 0.53
SIX4-203ENST00000556952 TMEM37Q8WXS4 190 aa18.35■□□□□ 0.53
SIX4-203ENST00000556952 MAP1LC3BQ9GZQ8 125 aa18.35■□□□□ 0.53
SIX4-203ENST00000556952 NUDT19A8MXV4 375 aa18.34■□□□□ 0.53
SIX4-203ENST00000556952 HYPMO75409 117 aa18.34■□□□□ 0.53
SIX4-203ENST00000556952 RPLP1P05386 114 aaKnown RBP18.34■□□□□ 0.53
SIX4-203ENST00000556952 RELQ04864 619 aaPredicted RBP18.34■□□□□ 0.53
SIX4-203ENST00000556952 KIAA0141Q14154 515 aaPredicted RBP18.34■□□□□ 0.53
SIX4-203ENST00000556952 ZNF491Q8N8L2 437 aa18.34■□□□□ 0.53
SIX4-203ENST00000556952 OR4X2Q8NGF9 303 aa18.34■□□□□ 0.53
SIX4-203ENST00000556952 OR1B1Q8NGR6 318 aa18.34■□□□□ 0.53
SIX4-203ENST00000556952 RNF125Q96EQ8 232 aa18.34■□□□□ 0.53
SIX4-203ENST00000556952 SEPSECSQ9HD40 501 aaKnown RBP18.34■□□□□ 0.53
SIX4-203ENST00000556952 DOK5Q9P104 306 aa18.34■□□□□ 0.53
SIX4-203ENST00000556952 FUT9Q9Y231 359 aa18.34■□□□□ 0.53
SIX4-203ENST00000556952 WI2-2373I1.2A0A1W2PRP0 233 aa18.34■□□□□ 0.53
SIX4-203ENST00000556952 IGHV3-11P01762 117 aa18.34■□□□□ 0.53
SIX4-203ENST00000556952 ORM2P19652 201 aa18.34■□□□□ 0.53
SIX4-203ENST00000556952 LYZP61626 148 aa18.34■□□□□ 0.53
SIX4-203ENST00000556952 LCN15Q6UWW0 184 aa18.34■□□□□ 0.53
SIX4-203ENST00000556952 IL34Q6ZMJ4 242 aa18.34■□□□□ 0.53
SIX4-203ENST00000556952 LINC01006Q8NI28 216 aa18.34■□□□□ 0.53
SIX4-203ENST00000556952 GNB4Q9HAV0 340 aa18.34■□□□□ 0.53
SIX4-203ENST00000556952 IL4P05112 153 aa18.33■□□□□ 0.52
SIX4-203ENST00000556952 ARL3P36405 182 aa18.33■□□□□ 0.52
SIX4-203ENST00000556952 PATE2Q6UY27 113 aa18.33■□□□□ 0.52
SIX4-203ENST00000556952 OR5AU1Q8NGC0 362 aa18.33■□□□□ 0.52
SIX4-203ENST00000556952 OR4F5Q8NH21 305 aa18.33■□□□□ 0.52
SIX4-203ENST00000556952 WIPF2Q8TF74 440 aaPredicted RBP18.33■□□□□ 0.52
SIX4-203ENST00000556952 UBE2E2Q96LR5 201 aa18.33■□□□□ 0.52
SIX4-203ENST00000556952 S100A7AQ86SG5 101 aa18.32■□□□□ 0.52
SIX4-203ENST00000556952 COMMD7Q86VX2 200 aa18.32■□□□□ 0.52
SIX4-203ENST00000556952 HIGD1AQ9Y241 93 aa18.32■□□□□ 0.52
SIX4-203ENST00000556952 PUS1Q9Y606 427 aaKnown RBP eCLIP18.32■□□□□ 0.52
SIX4-203ENST00000556952 STAG3L2P0CL84 134 aa18.31■□□□□ 0.52
SIX4-203ENST00000556952 STAG3L3P0CL85 134 aa18.31■□□□□ 0.52
SIX4-203ENST00000556952 TAS2R45P59539 299 aa18.31■□□□□ 0.52
SIX4-203ENST00000556952 AWAT1Q58HT5 328 aa18.31■□□□□ 0.52
SIX4-203ENST00000556952 PBDC1Q9BVG4 233 aa18.31■□□□□ 0.52
SIX4-203ENST00000556952 PPP5D1E7EU14 171 aa18.3■□□□□ 0.52
SIX4-203ENST00000556952 FOXL1Q12952 345 aa18.3■□□□□ 0.52
SIX4-203ENST00000556952 SPATA31B1PQ5VZV4 182 aa18.3■□□□□ 0.52
SIX4-203ENST00000556952 LINC00305Q7Z4B0 112 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms