RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 NKX2-1P43699 371 aaPredicted RBP10.59□□□□□ -0.71
SLIRP-207ENST00000556831 RPL11P62913 178 aaKnown RBP10.59□□□□□ -0.71
SLIRP-207ENST00000556831 TIGITQ495A1 244 aa10.59□□□□□ -0.71
SLIRP-207ENST00000556831 GRAMD2BQ96HH9 432 aa10.59□□□□□ -0.71
SLIRP-207ENST00000556831 IGHV3OR16-13A0A075B7E8 117 aa10.58□□□□□ -0.72
SLIRP-207ENST00000556831 IGHV3-74A0A0B4J1X5 117 aa10.58□□□□□ -0.72
SLIRP-207ENST00000556831 ZFP92A6NM28 416 aa10.58□□□□□ -0.72
SLIRP-207ENST00000556831 CHEK1O14757 476 aa10.58□□□□□ -0.72
SLIRP-207ENST00000556831 IGLC1P0CG04 106 aa10.58□□□□□ -0.72
SLIRP-207ENST00000556831 GPX4P36969 197 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-207ENST00000556831 AP2S1P53680 142 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-207ENST00000556831 MLANAQ16655 118 aa10.58□□□□□ -0.72
SLIRP-207ENST00000556831 IAH1Q2TAA2 248 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-207ENST00000556831 CLLU1Q5K131 121 aa10.58□□□□□ -0.72
SLIRP-207ENST00000556831 SPANXN5Q5MJ07 72 aa10.58□□□□□ -0.72
SLIRP-207ENST00000556831 DEFB125Q8N687 156 aa10.58□□□□□ -0.72
SLIRP-207ENST00000556831 ZNF680Q8NEM1 530 aa10.58□□□□□ -0.72
SLIRP-207ENST00000556831 MITD1Q8WV92 249 aa10.58□□□□□ -0.72
SLIRP-207ENST00000556831 NPIPB3Q92617 1050 aa10.58□□□□□ -0.72
SLIRP-207ENST00000556831 ZNF414Q96IQ9 312 aa10.58□□□□□ -0.72
SLIRP-207ENST00000556831 ZFAND3Q9H8U3 227 aa10.58□□□□□ -0.72
SLIRP-207ENST00000556831 C19orf73Q9NVV2 129 aa10.58□□□□□ -0.72
SLIRP-207ENST00000556831 MRPL36Q9P0J6 103 aaKnown RBP10.58□□□□□ -0.72
SLIRP-207ENST00000556831 PFDN2Q9UHV9 154 aa10.58□□□□□ -0.72
SLIRP-207ENST00000556831 STRAPQ9Y3F4 350 aaKnown RBP10.58□□□□□ -0.72
SLIRP-207ENST00000556831 IGKV3-7A0A075B6H7 116 aa10.57□□□□□ -0.72
SLIRP-207ENST00000556831 FAM25EA8MYX2 175 aa10.57□□□□□ -0.72
SLIRP-207ENST00000556831 L7N2F9 121 aa10.57□□□□□ -0.72
SLIRP-207ENST00000556831 DNASE2O00115 360 aaPredicted RBP10.57□□□□□ -0.72
SLIRP-207ENST00000556831 SSSCA1O60232 199 aa10.57□□□□□ -0.72
SLIRP-207ENST00000556831 TSC22D2O75157 780 aa10.57□□□□□ -0.72
SLIRP-207ENST00000556831 RD3LP0DJH9 198 aa10.57□□□□□ -0.72
SLIRP-207ENST00000556831 YPEL3P61236 119 aaPredicted RBP10.57□□□□□ -0.72
SLIRP-207ENST00000556831 TCF24Q7RTU0 167 aa10.57□□□□□ -0.72
SLIRP-207ENST00000556831 CCDC28AQ8IWP9 274 aa10.57□□□□□ -0.72
SLIRP-207ENST00000556831 TMEM170AQ8WVE7 144 aa10.57□□□□□ -0.72
SLIRP-207ENST00000556831 RCHY1Q96PM5 261 aa10.57□□□□□ -0.72
SLIRP-207ENST00000556831 RNF2Q99496 336 aa10.57□□□□□ -0.72
SLIRP-207ENST00000556831 SPATA25Q9BR10 227 aa10.57□□□□□ -0.72
SLIRP-207ENST00000556831 GSKIPQ9P0R6 139 aa10.57□□□□□ -0.72
SLIRP-207ENST00000556831 IGHV3-66A0A0C4DH42 116 aa10.56□□□□□ -0.72
SLIRP-207ENST00000556831 H3BP45 60 aa10.56□□□□□ -0.72
SLIRP-207ENST00000556831 IGKV1-17P01599 117 aa10.56□□□□□ -0.72
SLIRP-207ENST00000556831 IL4P05112 153 aa10.56□□□□□ -0.72
SLIRP-207ENST00000556831 NUP62P37198 522 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-207ENST00000556831 TFPI2P48307 235 aa10.56□□□□□ -0.72
SLIRP-207ENST00000556831 CMC4P56277 68 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-207ENST00000556831 Q5BKY6 102 aa10.56□□□□□ -0.72
SLIRP-207ENST00000556831 ST8SIA2Q92186 375 aa10.56□□□□□ -0.72
SLIRP-207ENST00000556831 WWC2-AS2Q96NR7 200 aa10.56□□□□□ -0.72
SLIRP-207ENST00000556831 WFDC10AQ9H1F0 79 aa10.56□□□□□ -0.72
SLIRP-207ENST00000556831 STAB2Q8WWQ8 2551 aa10.55□□□□□ -0.72
SLIRP-207ENST00000556831 C5orf51A6NDU8 294 aa10.55□□□□□ -0.72
SLIRP-207ENST00000556831 TOMM40O96008 361 aa10.55□□□□□ -0.72
SLIRP-207ENST00000556831 CXCL3P19876 107 aa10.55□□□□□ -0.72
SLIRP-207ENST00000556831 POLR2GP62487 172 aaKnown RBP eCLIP10.55□□□□□ -0.72
SLIRP-207ENST00000556831 AKR1C1Q04828 323 aa10.55□□□□□ -0.72
SLIRP-207ENST00000556831 SEC22CQ9BRL7 303 aa10.55□□□□□ -0.72
SLIRP-207ENST00000556831 PBDC1Q9BVG4 233 aa10.55□□□□□ -0.72
SLIRP-207ENST00000556831 MED9Q9NWA0 146 aa10.55□□□□□ -0.72
SLIRP-207ENST00000556831 PSENENQ9NZ42 101 aa10.55□□□□□ -0.72
SLIRP-207ENST00000556831 RABAC1Q9UI14 185 aa10.55□□□□□ -0.72
SLIRP-207ENST00000556831 LOC102724200A0A096LPH7 203 aaPredicted RBP10.54□□□□□ -0.72
SLIRP-207ENST00000556831 SMCO3A2RU48 225 aa10.54□□□□□ -0.72
SLIRP-207ENST00000556831 HELTA6NFD8 242 aa10.54□□□□□ -0.72
SLIRP-207ENST00000556831 MPTX1A8MV57 137 aa10.54□□□□□ -0.72
SLIRP-207ENST00000556831 SMLR1H3BR10 107 aa10.54□□□□□ -0.72
SLIRP-207ENST00000556831 P2RY1P47900 373 aa10.54□□□□□ -0.72
SLIRP-207ENST00000556831 VAMP2P63027 116 aa10.54□□□□□ -0.72
SLIRP-207ENST00000556831 GAMTQ14353 236 aa10.54□□□□□ -0.72
SLIRP-207ENST00000556831 OPCMLQ14982 345 aa10.54□□□□□ -0.72
SLIRP-207ENST00000556831 HAGHQ16775 308 aa10.54□□□□□ -0.72
SLIRP-207ENST00000556831 GBGT1Q8N5D6 347 aa10.54□□□□□ -0.72
SLIRP-207ENST00000556831 C12orf45Q8N5I9 185 aaPredicted RBP10.54□□□□□ -0.72
SLIRP-207ENST00000556831 OR51G1Q8NGK1 321 aa10.54□□□□□ -0.72
SLIRP-207ENST00000556831 OR4D5Q8NGN0 318 aa10.54□□□□□ -0.72
SLIRP-207ENST00000556831 RAB40CQ96S21 281 aa10.54□□□□□ -0.72
SLIRP-207ENST00000556831 GGTLC1Q9BX51 225 aa10.54□□□□□ -0.72
SLIRP-207ENST00000556831 VSIRQ9H7M9 311 aa10.54□□□□□ -0.72
SLIRP-207ENST00000556831 A0A0D9SG52 128 aa10.53□□□□□ -0.72
SLIRP-207ENST00000556831 CCSO14618 274 aa10.53□□□□□ -0.72
SLIRP-207ENST00000556831 DFFBO76075 338 aa10.53□□□□□ -0.72
SLIRP-207ENST00000556831 M6PRP20645 277 aa10.53□□□□□ -0.72
SLIRP-207ENST00000556831 CRYBB3P26998 211 aa10.53□□□□□ -0.72
SLIRP-207ENST00000556831 S100A11P31949 105 aa10.53□□□□□ -0.72
SLIRP-207ENST00000556831 APOC4P55056 127 aa10.53□□□□□ -0.72
SLIRP-207ENST00000556831 ID3Q02535 119 aa10.53□□□□□ -0.72
SLIRP-207ENST00000556831 OR8G2PQ6IF36 304 aa10.53□□□□□ -0.72
SLIRP-207ENST00000556831 WFDC3Q8IUB2 231 aa10.53□□□□□ -0.72
SLIRP-207ENST00000556831 STXBP6Q8NFX7 210 aa10.53□□□□□ -0.72
SLIRP-207ENST00000556831 TM2D3Q9BRN9 247 aa10.53□□□□□ -0.72
SLIRP-207ENST00000556831 DNAH7Q8WXX0 4024 aa10.52□□□□□ -0.72
SLIRP-207ENST00000556831 CFDP00746 253 aaPredicted RBP10.52□□□□□ -0.73
SLIRP-207ENST00000556831 APOHP02749 345 aaPredicted RBP10.52□□□□□ -0.73
SLIRP-207ENST00000556831 PSG1P11464 419 aa10.52□□□□□ -0.73
SLIRP-207ENST00000556831 PVALBP20472 110 aaPredicted RBP10.52□□□□□ -0.73
SLIRP-207ENST00000556831 S100A7P31151 101 aa10.52□□□□□ -0.73
SLIRP-207ENST00000556831 LYZP61626 148 aa10.52□□□□□ -0.73
SLIRP-207ENST00000556831 LGALSLQ3ZCW2 172 aaPredicted RBP10.52□□□□□ -0.73
SLIRP-207ENST00000556831 GSG1LQ6UXU4 331 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms