RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 C8orf88P0DMB2 117 aa10.74□□□□□ -0.69
SNX6-206ENST00000556162 OR2F1Q13607 317 aa10.74□□□□□ -0.69
SNX6-206ENST00000556162 OR5C1Q8NGR4 320 aa10.74□□□□□ -0.69
SNX6-206ENST00000556162 TMEM147Q9BVK8 224 aa10.74□□□□□ -0.69
SNX6-206ENST00000556162 TECRQ9NZ01 308 aaKnown RBP10.74□□□□□ -0.69
SNX6-206ENST00000556162 CFDP00746 253 aaPredicted RBP10.73□□□□□ -0.69
SNX6-206ENST00000556162 NPPCP23582 126 aa10.73□□□□□ -0.69
SNX6-206ENST00000556162 NUP62P37198 522 aaPredicted RBP10.73□□□□□ -0.69
SNX6-206ENST00000556162 METTL26Q96S19 204 aa10.73□□□□□ -0.69
SNX6-206ENST00000556162 IGHV7-4-1A0A0J9YVY3 117 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 RAB31Q13636 194 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 VWC2Q2TAL6 325 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 DEFB114Q30KQ6 69 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 BEAN1Q3B7T3 259 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 CYP2G1PQ6ZSU1 146 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 BPIFCQ8NFQ6 507 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 RNF125Q96EQ8 232 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 SMPXQ9UHP9 88 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 LSM4Q9Y4Z0 139 aaKnown RBP10.72□□□□□ -0.69
SNX6-206ENST00000556162 HSPB11Q9Y547 144 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 A0A1B0GVG6 124 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 BMI1P35226 326 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 SELENOTP62341 195 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 EGFEM1PQ0D2K5 195 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 CLINT1Q14677 625 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 KPRPQ5T749 579 aaPredicted RBP10.72□□□□□ -0.69
SNX6-206ENST00000556162 ZNF546Q86UE3 836 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 NARS2Q96I59 477 aaKnown RBP10.72□□□□□ -0.69
SNX6-206ENST00000556162 PBDC1Q9BVG4 233 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 MLXQ9UH92 298 aa10.72□□□□□ -0.69
SNX6-206ENST00000556162 hCG_2014768A0A024R1R8 64 aa10.71□□□□□ -0.69
SNX6-206ENST00000556162 FXYD6-FXYD2A0A087WZ82 144 aa10.71□□□□□ -0.69
SNX6-206ENST00000556162 IGHV3-49A0A0A0MS15 119 aa10.71□□□□□ -0.69
SNX6-206ENST00000556162 UBE2L5PA0A1B0GUS4 154 aa10.71□□□□□ -0.69
SNX6-206ENST00000556162 WI2-2373I1.2A0A1W2PRP0 233 aa10.71□□□□□ -0.69
SNX6-206ENST00000556162 GATA2P23769 480 aaPredicted RBP10.71□□□□□ -0.69
SNX6-206ENST00000556162 BTNL8Q6UX41 500 aa10.71□□□□□ -0.69
SNX6-206ENST00000556162 INO80EQ8NBZ0 244 aaPredicted RBP10.71□□□□□ -0.69
SNX6-206ENST00000556162 OR2K2Q8NGT1 345 aa10.71□□□□□ -0.69
SNX6-206ENST00000556162 RHPN1-AS1Q9BWJ2 59 aa10.71□□□□□ -0.69
SNX6-206ENST00000556162 RABAC1Q9UI14 185 aa10.71□□□□□ -0.69
SNX6-206ENST00000556162 WDR83OSQ9Y284 106 aa10.71□□□□□ -0.69
SNX6-206ENST00000556162 IGHV3OR16-13A0A075B7E8 117 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 IGHV3-74A0A0B4J1X5 117 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 A0A1W2PS18 150 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 CHEK1O14757 476 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 AGPAT2O15120 278 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 CRYBB3P26998 211 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 LYZP61626 148 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 USF2Q15853 346 aaPredicted RBP10.7□□□□□ -0.7
SNX6-206ENST00000556162 CD300EQ496F6 205 aaPredicted RBP10.7□□□□□ -0.7
SNX6-206ENST00000556162 TMEM182Q6ZP80 229 aaPredicted RBP10.7□□□□□ -0.7
SNX6-206ENST00000556162 PFDN2Q9UHV9 154 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 DNAH3Q8TD57 4116 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 DFFBO76075 338 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 HNRNPCP07910 306 aaKnown RBP eCLIP10.7□□□□□ -0.72e-6■■■□□ 17.4
SNX6-206ENST00000556162 CAMLGP49069 296 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 KRTAP10-11P60412 298 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 LAMTOR1Q6IAA8 161 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 LCN12Q6JVE5 192 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 RBPMS2Q6ZRY4 209 aaKnown RBP10.7□□□□□ -0.7
SNX6-206ENST00000556162 AQP10Q96PS8 301 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 MGST2Q99735 147 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 TMEM231Q9H6L2 316 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 SELENOKQ9Y6D0 94 aa10.7□□□□□ -0.7
SNX6-206ENST00000556162 G3V3Q6 166 aa10.69□□□□□ -0.7
SNX6-206ENST00000556162 SMLR1H3BR10 107 aa10.69□□□□□ -0.7
SNX6-206ENST00000556162 MPDU1O75352 247 aa10.69□□□□□ -0.7
SNX6-206ENST00000556162 APOHP02749 345 aaPredicted RBP10.69□□□□□ -0.7
SNX6-206ENST00000556162 ORM2P19652 201 aa10.69□□□□□ -0.7
SNX6-206ENST00000556162 FGF7P21781 194 aa10.69□□□□□ -0.7
SNX6-206ENST00000556162 GRAMD2BQ96HH9 432 aa10.69□□□□□ -0.7
SNX6-206ENST00000556162 ATP5SQ99766 215 aa10.69□□□□□ -0.7
SNX6-206ENST00000556162 SMIM3Q9BZL3 60 aa10.69□□□□□ -0.7
SNX6-206ENST00000556162 SLC45A2Q9UMX9 530 aa10.69□□□□□ -0.7
SNX6-206ENST00000556162 ZNF256Q9Y2P7 627 aaPredicted RBP10.69□□□□□ -0.7
SNX6-206ENST00000556162 IGHV3-66A0A0C4DH42 116 aa10.68□□□□□ -0.7
SNX6-206ENST00000556162 LINC00869P0C866 280 aa10.68□□□□□ -0.7
SNX6-206ENST00000556162 EIF2B2P49770 351 aaKnown RBP10.68□□□□□ -0.7
SNX6-206ENST00000556162 ST8SIA2Q92186 375 aa10.68□□□□□ -0.7
SNX6-206ENST00000556162 RNF2Q99496 336 aa10.68□□□□□ -0.7
SNX6-206ENST00000556162 VSIRQ9H7M9 311 aa10.68□□□□□ -0.7
SNX6-206ENST00000556162 TNFSF18Q9UNG2 199 aa10.68□□□□□ -0.7
SNX6-206ENST00000556162 TRAV25A0A0B4J276 109 aa10.68□□□□□ -0.7
SNX6-206ENST00000556162 IZUMO1RA6ND01 250 aa10.68□□□□□ -0.7
SNX6-206ENST00000556162 IFNA5P01569 189 aa10.68□□□□□ -0.7
SNX6-206ENST00000556162 CD5P06127 495 aa10.68□□□□□ -0.7
SNX6-206ENST00000556162 TMEM61Q8N0U2 210 aa10.68□□□□□ -0.7
SNX6-206ENST00000556162 OR1B1Q8NGR6 318 aa10.68□□□□□ -0.7
SNX6-206ENST00000556162 PPP1R14BQ96C90 147 aa10.68□□□□□ -0.7
SNX6-206ENST00000556162 U3KQE9 123 aa10.68□□□□□ -0.7
SNX6-206ENST00000556162 GP9P14770 177 aa10.67□□□□□ -0.7
SNX6-206ENST00000556162 S100A7P31151 101 aa10.67□□□□□ -0.7
SNX6-206ENST00000556162 GUCA2BQ16661 112 aa10.67□□□□□ -0.7
SNX6-206ENST00000556162 Q6ZRG5 221 aa10.67□□□□□ -0.7
SNX6-206ENST00000556162 GGTLC1Q9BX51 225 aa10.67□□□□□ -0.7
SNX6-206ENST00000556162 WDR61Q9GZS3 305 aaKnown RBP10.67□□□□□ -0.7
SNX6-206ENST00000556162 ARPC5O15511 151 aa10.66□□□□□ -0.7
SNX6-206ENST00000556162 BUB3O43684 328 aa10.66□□□□□ -0.7
SNX6-206ENST00000556162 HYPMO75409 117 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms