RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 YTHDF2Q9Y5A9 579 aaKnown RBP11.57□□□□□ -0.56
VPS33B-205ENST00000556096 TRAV30A0A087WSZ9 112 aa11.57□□□□□ -0.56
VPS33B-205ENST00000556096 OR7C2O60412 319 aa11.57□□□□□ -0.56
VPS33B-205ENST00000556096 HYPMO75409 117 aa11.57□□□□□ -0.56
VPS33B-205ENST00000556096 AVPP01185 164 aa11.57□□□□□ -0.56
VPS33B-205ENST00000556096 HIST1H1BP16401 226 aaKnown RBP11.57□□□□□ -0.56
VPS33B-205ENST00000556096 NPPCP23582 126 aa11.57□□□□□ -0.56
VPS33B-205ENST00000556096 TMEM241Q24JQ0 296 aa11.57□□□□□ -0.56
VPS33B-205ENST00000556096 FAM110DQ8TAY7 271 aaPredicted RBP11.57□□□□□ -0.56
VPS33B-205ENST00000556096 RPUSD4Q96CM3 377 aaKnown RBP11.57□□□□□ -0.56
VPS33B-205ENST00000556096 ZNF355PQ9NSJ1 428 aa11.57□□□□□ -0.56
VPS33B-205ENST00000556096 DOK5Q9P104 306 aa11.57□□□□□ -0.56
VPS33B-205ENST00000556096 IGKV1-17P01599 117 aa11.56□□□□□ -0.56
VPS33B-205ENST00000556096 MFAP4P55083 255 aa11.56□□□□□ -0.56
VPS33B-205ENST00000556096 MORN5Q5VZ52 161 aa11.56□□□□□ -0.56
VPS33B-205ENST00000556096 LINC00305Q7Z4B0 112 aa11.56□□□□□ -0.56
VPS33B-205ENST00000556096 C15orf54Q8N8G6 183 aa11.56□□□□□ -0.56
VPS33B-205ENST00000556096 OR5T1Q8NG75 326 aa11.56□□□□□ -0.56
VPS33B-205ENST00000556096 SMR3AQ99954 134 aa11.56□□□□□ -0.56
VPS33B-205ENST00000556096 GSX1Q9H4S2 264 aaPredicted RBP11.56□□□□□ -0.56
VPS33B-205ENST00000556096 ACANP16112 2415 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 TRAV5A0A0B4J249 113 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 A0A1W2PRE2 83 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 ATP6V0E1O15342 81 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 PSG1P11464 419 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 ORM2P19652 201 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 ZNF674Q2M3X9 581 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 TIGITQ495A1 244 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 UNQ5815/PRO19632Q6UWF5 114 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 STXBP6Q8NFX7 210 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 OR5AU1Q8NGC0 362 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 OR51G1Q8NGK1 321 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 OR1B1Q8NGR6 318 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 UHRF2Q96PU4 802 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 SVEP1Q4LDE5 3571 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 A6NDX4 124 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 COLCA2A8K830 154 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 RD3LP0DJH9 198 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 IGHV4-31P0DP07 118 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 CRIP2P52943 208 aaPredicted RBP11.55□□□□□ -0.56
VPS33B-205ENST00000556096 YPEL3P61236 119 aaPredicted RBP11.55□□□□□ -0.56
VPS33B-205ENST00000556096 TMEM219Q86XT9 240 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 C11orf52Q96A22 123 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 TXN2Q99757 166 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 OR51M1Q9H341 326 aa11.55□□□□□ -0.56
VPS33B-205ENST00000556096 NDUFB4O95168 129 aa11.54□□□□□ -0.56
VPS33B-205ENST00000556096 NDUFB8O95169 186 aa11.54□□□□□ -0.56
VPS33B-205ENST00000556096 TOMM40O96008 361 aa11.54□□□□□ -0.56
VPS33B-205ENST00000556096 TGFAP01135 160 aa11.54□□□□□ -0.56
VPS33B-205ENST00000556096 AMY1AP04745 511 aa11.54□□□□□ -0.56
VPS33B-205ENST00000556096 FCGR2BP31994 310 aaPredicted RBP11.54□□□□□ -0.56
VPS33B-205ENST00000556096 KIAA0141Q14154 515 aaPredicted RBP11.54□□□□□ -0.56
VPS33B-205ENST00000556096 VN1R17PQ8TDU5 208 aa11.54□□□□□ -0.56
VPS33B-205ENST00000556096 PAXXQ9BUH6 204 aa11.54□□□□□ -0.56
VPS33B-205ENST00000556096 TMUB1Q9BVT8 246 aa11.54□□□□□ -0.56
VPS33B-205ENST00000556096 TMEM242Q9NWH2 141 aa11.54□□□□□ -0.56
VPS33B-205ENST00000556096 C21orf62Q9NYP8 219 aa11.54□□□□□ -0.56
VPS33B-205ENST00000556096 CXorf65A6NEN9 183 aa11.53□□□□□ -0.56
VPS33B-205ENST00000556096 GNG7O60262 68 aa11.53□□□□□ -0.56
VPS33B-205ENST00000556096 OR10J4P0C629 311 aa11.53□□□□□ -0.56
VPS33B-205ENST00000556096 MRPL27Q9P0M9 148 aaKnown RBP11.53□□□□□ -0.56
VPS33B-205ENST00000556096 FBXL7Q9UJT9 491 aa11.53□□□□□ -0.56
VPS33B-205ENST00000556096 PITPNC1Q9UKF7 332 aa11.53□□□□□ -0.56
VPS33B-205ENST00000556096 HIGD1AQ9Y241 93 aa11.53□□□□□ -0.56
VPS33B-205ENST00000556096 PRELID1Q9Y255 219 aa11.53□□□□□ -0.56
VPS33B-205ENST00000556096 SOX21Q9Y651 276 aaPredicted RBP11.53□□□□□ -0.56
VPS33B-205ENST00000556096 HIVEP1P15822 2718 aa11.53□□□□□ -0.56
VPS33B-205ENST00000556096 TRBV9A0A0B4J1U6 114 aa11.52□□□□□ -0.56
VPS33B-205ENST00000556096 F8W735 103 aaPredicted RBP11.52□□□□□ -0.56
VPS33B-205ENST00000556096 H3BUX3 64 aa11.52□□□□□ -0.56
VPS33B-205ENST00000556096 M0QZK8 103 aa11.52□□□□□ -0.56
VPS33B-205ENST00000556096 OR2J3O76001 311 aa11.52□□□□□ -0.56
VPS33B-205ENST00000556096 OR2C1O95371 312 aa11.52□□□□□ -0.56
VPS33B-205ENST00000556096 CD99P14209 185 aa11.52□□□□□ -0.56
VPS33B-205ENST00000556096 RPL23P62829 140 aaKnown RBP11.52□□□□□ -0.56
VPS33B-205ENST00000556096 UBE2L3P68036 154 aaKnown RBP11.52□□□□□ -0.56
VPS33B-205ENST00000556096 ECSCRQ19T08 205 aa11.52□□□□□ -0.56
VPS33B-205ENST00000556096 C16orf82Q7Z2V1 217 aa11.52□□□□□ -0.56
VPS33B-205ENST00000556096 SCO2A0A1W2PP80 73 aa11.52□□□□□ -0.57
VPS33B-205ENST00000556096 WI2-2373I1.2A0A1W2PRP0 233 aa11.52□□□□□ -0.57
VPS33B-205ENST00000556096 LINC01548A6NM66 108 aa11.52□□□□□ -0.57
VPS33B-205ENST00000556096 SCGB2A1O75556 95 aa11.52□□□□□ -0.57
VPS33B-205ENST00000556096 LYZP61626 148 aa11.52□□□□□ -0.57
VPS33B-205ENST00000556096 C19orf54Q5BKX5 351 aa11.52□□□□□ -0.57
VPS33B-205ENST00000556096 Q71RC1 249 aaPredicted RBP11.52□□□□□ -0.57
VPS33B-205ENST00000556096 FXYD5Q96DB9 178 aa11.52□□□□□ -0.57
VPS33B-205ENST00000556096 CTDSP1Q9GZU7 261 aa11.52□□□□□ -0.57
VPS33B-205ENST00000556096 SH2D7A6NKC9 451 aaPredicted RBP11.51□□□□□ -0.57
VPS33B-205ENST00000556096 MT-ND4LP03901 98 aa11.51□□□□□ -0.57
VPS33B-205ENST00000556096 PYYP10082 97 aa11.51□□□□□ -0.57
VPS33B-205ENST00000556096 ADIRFQ15847 76 aa11.51□□□□□ -0.57
VPS33B-205ENST00000556096 Q56UQ5 140 aa11.51□□□□□ -0.57
VPS33B-205ENST00000556096 ZNF491Q8N8L2 437 aa11.51□□□□□ -0.57
VPS33B-205ENST00000556096 ISOC2Q96AB3 205 aa11.51□□□□□ -0.57
VPS33B-205ENST00000556096 YPEL4Q96NS1 127 aa11.51□□□□□ -0.57
VPS33B-205ENST00000556096 G3V318 75 aa11.5□□□□□ -0.57
VPS33B-205ENST00000556096 FSHBP01225 129 aa11.5□□□□□ -0.57
VPS33B-205ENST00000556096 ZNF343Q6P1L6 599 aa11.5□□□□□ -0.57
VPS33B-205ENST00000556096 S100A7AQ86SG5 101 aa11.5□□□□□ -0.57
VPS33B-205ENST00000556096 Q8WTZ3 238 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms