RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 ALKAL1Q6UXT8 129 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 Q6ZSR6 202 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 ZNF550Q7Z398 422 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 C20orf196Q8IYI0 205 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 TMEM86AQ8N2M4 240 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 C6orf223Q8N319 242 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 FTMTQ8N4E7 242 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 ZNF615Q8N8J6 731 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 C20orf203Q8NBC4 194 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 TMEM229BQ8NBD8 167 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 OR51G1Q8NGK1 321 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 CT55Q8WUE5 264 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 GPR146Q96CH1 333 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 PAGE5Q96GU1 130 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 RTBDNQ9BSG5 229 aaPredicted RBP2.22□□□□□ -2.05
SRP54-209ENST00000555746 POLR2J2Q9GZM3 115 aaKnown RBP2.22□□□□□ -2.05
SRP54-209ENST00000555746 OR8D2Q9GZM6 311 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 PBOV1Q9GZY1 135 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 POLR2J3Q9H1A7 115 aaKnown RBP2.22□□□□□ -2.05
SRP54-209ENST00000555746 OR52D1Q9H346 318 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 SRMSQ9H3Y6 488 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 SLC25A22Q9H936 323 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 FAM49BQ9NUQ9 324 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 AIG1Q9NVV5 245 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 DEC1Q9P2X7 70 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 SLC23A2Q9UGH3 650 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 HIGD1AQ9Y241 93 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 V9GY05 133 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 ALPK2Q86TB3 2170 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 DNAH1Q9P2D7 4330 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 TRAV5A0A0B4J249 113 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 CLDN25C9JDP6 229 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 ZNF207O43670 478 aaKnown RBP2.21□□□□□ -2.06
SRP54-209ENST00000555746 ARL6IP5O75915 188 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 OR2A4O95047 310 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 KCNK2O95069 426 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 SOD3P08294 240 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 PAEPP09466 180 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 SCTP09683 121 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 OR4Q2P0C623 313 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 AKAIN1P0CW23 69 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 PGA4P0DJD7 388 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 PGA3P0DJD8 388 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 PGA5P0DJD9 388 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 CPMP14384 443 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 RCC1P18754 421 aaPredicted RBP2.21□□□□□ -2.06
SRP54-209ENST00000555746 GGT1P19440 569 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 NTF3P20783 257 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 MDKP21741 143 aaPredicted RBP2.21□□□□□ -2.06
SRP54-209ENST00000555746 PRTN3P24158 256 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 COX7A1P24310 79 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 CTRLP40313 264 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 GPR6P46095 362 aaPredicted RBP2.21□□□□□ -2.06
SRP54-209ENST00000555746 MTPNP58546 118 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 S100A10P60903 97 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 EIF5AP63241 154 aaKnown RBP2.21□□□□□ -2.06
SRP54-209ENST00000555746 IL15RAQ13261 267 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 ARFRP1Q13795 201 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 C1DQ13901 141 aaKnown RBP2.21□□□□□ -2.06
SRP54-209ENST00000555746 ZNF266Q14584 549 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 PAFAH1B3Q15102 231 aaKnown RBP2.21□□□□□ -2.06
SRP54-209ENST00000555746 NRF1Q16656 503 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 CCSMST1Q4G0I0 132 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 SPANXN3Q5MJ09 141 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 FAM201AQ5SY85 155 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 IBA57Q5T440 356 aaKnown RBP2.21□□□□□ -2.06
SRP54-209ENST00000555746 EIF5AL1Q6IS14 154 aaKnown RBP2.21□□□□□ -2.06
SRP54-209ENST00000555746 RPL22L1Q6P5R6 122 aaKnown RBP2.21□□□□□ -2.06
SRP54-209ENST00000555746 RASL11AQ6T310 242 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 RFLNAQ6ZTI6 216 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 PIANPQ8IYJ0 282 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 RNF175Q8N4F7 328 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 DCAF4L2Q8NA75 395 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 SUMF2Q8NBJ7 301 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 OR8B12Q8NGG6 310 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 OR8S1Q8NH09 359 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 ZNF420Q8TAQ5 688 aaPredicted RBP2.21□□□□□ -2.06
SRP54-209ENST00000555746 SRSF12Q8WXF0 261 aaKnown RBP2.21□□□□□ -2.06
SRP54-209ENST00000555746 DEDD2Q8WXF8 326 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 PP6455Q8WZ26 134 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 TMEM106AQ96A25 262 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 TMEM230Q96A57 120 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 SLAMF6Q96DU3 332 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 FMC1Q96HJ9 113 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 ZNF414Q96IQ9 312 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 IP6K3Q96PC2 410 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 OR2A7Q96R45 310 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 NRTNQ99748 197 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 GINS4Q9BRT9 223 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 PRADC1Q9BSG0 188 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 MED28Q9H204 178 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 OR51E2Q9H255 320 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 CXCL16Q9H2A7 254 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 PRO1933Q9H354 126 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 NOX3Q9HBY0 568 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 SAR1AQ9NR31 198 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 TMEM216Q9P0N5 145 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 LAMTOR3Q9UHA4 124 aa2.21□□□□□ -2.06
SRP54-209ENST00000555746 BOKQ9UMX3 212 aaPredicted RBP2.21□□□□□ -2.06
SRP54-209ENST00000555746 SOX21Q9Y651 276 aaPredicted RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms