RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 ACOT7LQ6ZUV0 252 aa10.18□□□□□ -0.78
SHMT2-219ENST00000555563 WFDC3Q8IUB2 231 aa10.18□□□□□ -0.78
SHMT2-219ENST00000555563 OR51G1Q8NGK1 321 aa10.18□□□□□ -0.78
SHMT2-219ENST00000555563 ENKURQ8TC29 256 aa10.18□□□□□ -0.78
SHMT2-219ENST00000555563 GRAMD2BQ96HH9 432 aa10.18□□□□□ -0.78
SHMT2-219ENST00000555563 MAP6D1Q9H9H5 199 aa10.18□□□□□ -0.78
SHMT2-219ENST00000555563 PSENENQ9NZ42 101 aa10.18□□□□□ -0.78
SHMT2-219ENST00000555563 GSKIPQ9P0R6 139 aa10.18□□□□□ -0.78
SHMT2-219ENST00000555563 RCL1Q9Y2P8 373 aaKnown RBP10.18□□□□□ -0.78
SHMT2-219ENST00000555563 IGKV1OR2-108A0A075B7D4 117 aa10.17□□□□□ -0.78
SHMT2-219ENST00000555563 TRAV2A0A0B4J234 112 aa10.17□□□□□ -0.78
SHMT2-219ENST00000555563 PAFAH1B2P68402 229 aa10.17□□□□□ -0.78
SHMT2-219ENST00000555563 ZNF124Q15973 351 aa10.17□□□□□ -0.78
SHMT2-219ENST00000555563 APRG1Q8IVJ8 170 aa10.17□□□□□ -0.78
SHMT2-219ENST00000555563 FAM24BQ8N5W8 94 aa10.17□□□□□ -0.78
SHMT2-219ENST00000555563 THAP8Q8NA92 274 aa10.17□□□□□ -0.78
SHMT2-219ENST00000555563 STXBP6Q8NFX7 210 aa10.17□□□□□ -0.78
SHMT2-219ENST00000555563 GLMPQ8WWB7 406 aa10.17□□□□□ -0.78
SHMT2-219ENST00000555563 RNF125Q96EQ8 232 aa10.17□□□□□ -0.78
SHMT2-219ENST00000555563 TRGV9Q99603 122 aa10.17□□□□□ -0.78
SHMT2-219ENST00000555563 PBDC1Q9BVG4 233 aa10.17□□□□□ -0.78
SHMT2-219ENST00000555563 RABAC1Q9UI14 185 aa10.17□□□□□ -0.78
SHMT2-219ENST00000555563 FAM25EA8MYX2 175 aa10.16□□□□□ -0.78
SHMT2-219ENST00000555563 DNASE2O00115 360 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-219ENST00000555563 MBPP02686 304 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-219ENST00000555563 PAX9P55771 341 aa10.16□□□□□ -0.78
SHMT2-219ENST00000555563 AKR1C1Q04828 323 aa10.16□□□□□ -0.78
SHMT2-219ENST00000555563 OR2F1Q13607 317 aa10.16□□□□□ -0.78
SHMT2-219ENST00000555563 OR8G2PQ6IF36 304 aa10.16□□□□□ -0.78
SHMT2-219ENST00000555563 C16orf54Q6UWD8 224 aa10.16□□□□□ -0.78
SHMT2-219ENST00000555563 C12orf45Q8N5I9 185 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-219ENST00000555563 SMIM8Q96KF7 97 aa10.16□□□□□ -0.78
SHMT2-219ENST00000555563 RAB40CQ96S21 281 aa10.16□□□□□ -0.78
SHMT2-219ENST00000555563 TENM3Q9P273 2699 aa10.15□□□□□ -0.78
SHMT2-219ENST00000555563 STAB2Q8WWQ8 2551 aa10.15□□□□□ -0.78
SHMT2-219ENST00000555563 C5orf51A6NDU8 294 aa10.15□□□□□ -0.78
SHMT2-219ENST00000555563 PMS2P5A8MQ11 134 aa10.15□□□□□ -0.78
SHMT2-219ENST00000555563 K7EQG2 157 aa10.15□□□□□ -0.78
SHMT2-219ENST00000555563 CCNKO75909 580 aa10.15□□□□□ -0.78
SHMT2-219ENST00000555563 FABP1P07148 127 aa10.15□□□□□ -0.78
SHMT2-219ENST00000555563 METTL15P1P0C7V9 234 aa10.15□□□□□ -0.78
SHMT2-219ENST00000555563 RPL35AP18077 110 aaKnown RBP10.15□□□□□ -0.78
SHMT2-219ENST00000555563 EIF2B2P49770 351 aaKnown RBP10.15□□□□□ -0.78
SHMT2-219ENST00000555563 LYZP61626 148 aa10.15□□□□□ -0.78
SHMT2-219ENST00000555563 TMEM14EPQ6UXP3 125 aa10.15□□□□□ -0.78
SHMT2-219ENST00000555563 EDA2RQ9HAV5 297 aa10.15□□□□□ -0.78
SHMT2-219ENST00000555563 SMCO3A2RU48 225 aa10.14□□□□□ -0.79
SHMT2-219ENST00000555563 HELTA6NFD8 242 aa10.14□□□□□ -0.79
SHMT2-219ENST00000555563 BUB3O43684 328 aa10.14□□□□□ -0.79
SHMT2-219ENST00000555563 TSC22D2O75157 780 aa10.14□□□□□ -0.79
SHMT2-219ENST00000555563 IL5P05113 134 aa10.14□□□□□ -0.79
SHMT2-219ENST00000555563 APOC4P55056 127 aa10.14□□□□□ -0.79
SHMT2-219ENST00000555563 CMC4P56277 68 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-219ENST00000555563 TAS2R30P59541 319 aa10.14□□□□□ -0.79
SHMT2-219ENST00000555563 DEFB131AP59861 70 aa10.14□□□□□ -0.79
SHMT2-219ENST00000555563 NRARPQ7Z6K4 114 aa10.14□□□□□ -0.79
SHMT2-219ENST00000555563 DCANP1Q8TF63 244 aa10.14□□□□□ -0.79
SHMT2-219ENST00000555563 HUWE1Q7Z6Z7 4374 aaKnown RBP10.13□□□□□ -0.79
SHMT2-219ENST00000555563 C7orf66A4D0T2 115 aa10.13□□□□□ -0.79
SHMT2-219ENST00000555563 SNRPGP15A8MWD9 76 aa10.13□□□□□ -0.79
SHMT2-219ENST00000555563 ZNF688P0C7X2 276 aa10.13□□□□□ -0.79
SHMT2-219ENST00000555563 NUP62P37198 522 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-219ENST00000555563 RRAS2P62070 204 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-219ENST00000555563 LEMD1Q68G75 181 aa10.13□□□□□ -0.79
SHMT2-219ENST00000555563 TMEM144Q7Z5S9 345 aa10.13□□□□□ -0.79
SHMT2-219ENST00000555563 STPG3Q8N7X2 389 aa10.13□□□□□ -0.79
SHMT2-219ENST00000555563 MUC7Q8TAX7 377 aa10.13□□□□□ -0.79
SHMT2-219ENST00000555563 LSM5Q9Y4Y9 91 aaKnown RBP10.13□□□□□ -0.79
SHMT2-219ENST00000555563 KIR2DL5BA0A0G2JN68 375 aa10.12□□□□□ -0.79
SHMT2-219ENST00000555563 KIR2DL5BA0A0G2JPC4 375 aa10.12□□□□□ -0.79
SHMT2-219ENST00000555563 K7EPK0 472 aa10.12□□□□□ -0.79
SHMT2-219ENST00000555563 DLK1P80370 383 aa10.12□□□□□ -0.79
SHMT2-219ENST00000555563 DEFB135Q30KP9 77 aa10.12□□□□□ -0.79
SHMT2-219ENST00000555563 GSG1LQ6UXU4 331 aa10.12□□□□□ -0.79
SHMT2-219ENST00000555563 SIGLEC15Q6ZMC9 328 aa10.12□□□□□ -0.79
SHMT2-219ENST00000555563 TMEM182Q6ZP80 229 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-219ENST00000555563 KIR2DL5AQ8N109 375 aa10.12□□□□□ -0.79
SHMT2-219ENST00000555563 KIR2DL5BQ8NHK3 375 aa10.12□□□□□ -0.79
SHMT2-219ENST00000555563 C2orf50Q96LR7 162 aa10.12□□□□□ -0.79
SHMT2-219ENST00000555563 OVOL2Q9BRP0 275 aa10.12□□□□□ -0.79
SHMT2-219ENST00000555563 GPN1Q9HCN4 374 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-219ENST00000555563 C3orf84H3BNL1 204 aa10.11□□□□□ -0.79
SHMT2-219ENST00000555563 L7N2F9 121 aa10.11□□□□□ -0.79
SHMT2-219ENST00000555563 UBE2CO00762 179 aa10.11□□□□□ -0.79
SHMT2-219ENST00000555563 GATA2P23769 480 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-219ENST00000555563 AP2S1P53680 142 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-219ENST00000555563 DEFA1P59665 94 aa10.11□□□□□ -0.79
SHMT2-219ENST00000555563 DEFA3P59666 94 aa10.11□□□□□ -0.79
SHMT2-219ENST00000555563 S100A10P60903 97 aa10.11□□□□□ -0.79
SHMT2-219ENST00000555563 VAMP2P63027 116 aa10.11□□□□□ -0.79
SHMT2-219ENST00000555563 ARL16Q0P5N6 197 aa10.11□□□□□ -0.79
SHMT2-219ENST00000555563 Q6ZWC4 215 aa10.11□□□□□ -0.79
SHMT2-219ENST00000555563 OR10P1Q8NGE3 313 aa10.11□□□□□ -0.79
SHMT2-219ENST00000555563 C11orf1Q9H5F2 150 aa10.11□□□□□ -0.79
SHMT2-219ENST00000555563 NRN1Q9NPD7 142 aa10.11□□□□□ -0.79
SHMT2-219ENST00000555563 PFDN2Q9UHV9 154 aa10.11□□□□□ -0.79
SHMT2-219ENST00000555563 INMT-MINDY4F8WBC2 141 aa10.1□□□□□ -0.79
SHMT2-219ENST00000555563 PRAF2O60831 178 aa10.1□□□□□ -0.79
SHMT2-219ENST00000555563 CFDP00746 253 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-219ENST00000555563 CAV2P51636 162 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms