RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 IL36BQ9NZH7 164 aa19.24■□□□□ 0.67
TMEM260-207ENST00000555497 PITPNC1Q9UKF7 332 aa19.24■□□□□ 0.67
TMEM260-207ENST00000555497 V9GYV3 84 aa19.24■□□□□ 0.67
TMEM260-207ENST00000555497 K7EIM0 57 aa19.23■□□□□ 0.67
TMEM260-207ENST00000555497 HYPMO75409 117 aa19.23■□□□□ 0.67
TMEM260-207ENST00000555497 C14orf144Q96I85 54 aa19.23■□□□□ 0.67
TMEM260-207ENST00000555497 ERVFC1-1P60608 527 aa19.23■□□□□ 0.67
TMEM260-207ENST00000555497 LEMD1Q68G75 181 aa19.23■□□□□ 0.67
TMEM260-207ENST00000555497 PSG1P11464 419 aa19.22■□□□□ 0.67
TMEM260-207ENST00000555497 PLP1P60201 277 aa19.22■□□□□ 0.67
TMEM260-207ENST00000555497 TIGITQ495A1 244 aa19.22■□□□□ 0.67
TMEM260-207ENST00000555497 RNASE7Q9H1E1 156 aaKnown RBP19.22■□□□□ 0.67
TMEM260-207ENST00000555497 MYCNOSP40205 109 aa19.21■□□□□ 0.67
TMEM260-207ENST00000555497 KLF17Q5JT82 389 aaPredicted RBP19.21■□□□□ 0.67
TMEM260-207ENST00000555497 BPESC1Q9GZL8 116 aa19.21■□□□□ 0.67
TMEM260-207ENST00000555497 CFAP46Q8IYW2 2715 aa19.21■□□□□ 0.67
TMEM260-207ENST00000555497 GCGP01275 180 aa19.21■□□□□ 0.67
TMEM260-207ENST00000555497 IGKV1-17P01599 117 aa19.21■□□□□ 0.67
TMEM260-207ENST00000555497 LMO4P61968 165 aa19.21■□□□□ 0.67
TMEM260-207ENST00000555497 BLNKQ8WV28 456 aa19.21■□□□□ 0.67
TMEM260-207ENST00000555497 SPTAN1Q13813 2472 aaKnown RBP19.2■□□□□ 0.66
TMEM260-207ENST00000555497 FABP4P15090 132 aa19.2■□□□□ 0.66
TMEM260-207ENST00000555497 SSTP61278 116 aa19.2■□□□□ 0.66
TMEM260-207ENST00000555497 RANP62826 216 aaKnown RBP19.2■□□□□ 0.66
TMEM260-207ENST00000555497 ASPHD1Q5U4P2 390 aa19.2■□□□□ 0.66
TMEM260-207ENST00000555497 Q8N6K4 173 aa19.2■□□□□ 0.66
TMEM260-207ENST00000555497 IGHV2-70DA0A0C4DH43 119 aa19.2■□□□□ 0.66
TMEM260-207ENST00000555497 XKRY2A2RUG3 117 aa19.2■□□□□ 0.66
TMEM260-207ENST00000555497 PKIAP61925 76 aa19.2■□□□□ 0.66
TMEM260-207ENST00000555497 NHLRC2Q8NBF2 726 aa19.2■□□□□ 0.66
TMEM260-207ENST00000555497 TRAPPC1Q9Y5R8 145 aa19.2■□□□□ 0.66
TMEM260-207ENST00000555497 TRAV34A0A0B4J273 112 aa19.19■□□□□ 0.66
TMEM260-207ENST00000555497 GNG5P63218 68 aa19.19■□□□□ 0.66
TMEM260-207ENST00000555497 CX3CL1P78423 397 aa19.19■□□□□ 0.66
TMEM260-207ENST00000555497 NDPQ00604 133 aa19.19■□□□□ 0.66
TMEM260-207ENST00000555497 CDC42EP3Q9UKI2 254 aa19.19■□□□□ 0.66
TMEM260-207ENST00000555497 OVOL3O00110 214 aa19.19■□□□□ 0.66
TMEM260-207ENST00000555497 PEX7O00628 323 aa19.19■□□□□ 0.66
TMEM260-207ENST00000555497 FRMD6-AS1P0C7T7 363 aa19.19■□□□□ 0.66
TMEM260-207ENST00000555497 GP9P14770 177 aa19.19■□□□□ 0.66
TMEM260-207ENST00000555497 LYZP61626 148 aa19.19■□□□□ 0.66
TMEM260-207ENST00000555497 MINOS1Q5TGZ0 78 aa19.19■□□□□ 0.66
TMEM260-207ENST00000555497 CCDC144NLQ6NUI1 221 aa19.19■□□□□ 0.66
TMEM260-207ENST00000555497 TMEM183AQ8IXX5 376 aa19.19■□□□□ 0.66
TMEM260-207ENST00000555497 AJUBAQ96IF1 538 aa19.19■□□□□ 0.66
TMEM260-207ENST00000555497 TBX15Q96SF7 602 aa19.19■□□□□ 0.66
TMEM260-207ENST00000555497 MINOS1-NBL1R4GNA1 71 aa19.19■□□□□ 0.66
TMEM260-207ENST00000555497 COA6Q5JTJ3 125 aaKnown RBP19.18■□□□□ 0.66
TMEM260-207ENST00000555497 STXBP6Q8NFX7 210 aa19.18■□□□□ 0.66
TMEM260-207ENST00000555497 BTF3L4Q96K17 158 aa19.18■□□□□ 0.66
TMEM260-207ENST00000555497 HIST1H2BLQ99880 126 aa19.18■□□□□ 0.66
TMEM260-207ENST00000555497 SVEP1Q4LDE5 3571 aa19.18■□□□□ 0.66
TMEM260-207ENST00000555497 NCBP2LA6PVI3 153 aaKnown RBP19.17■□□□□ 0.66
TMEM260-207ENST00000555497 H3BTX0 84 aa19.17■□□□□ 0.66
TMEM260-207ENST00000555497 TOX4O94842 621 aa19.17■□□□□ 0.66
TMEM260-207ENST00000555497 NBEAP1P0C6P0 100 aa19.17■□□□□ 0.66
TMEM260-207ENST00000555497 MGST1P10620 155 aaKnown RBP19.17■□□□□ 0.66
TMEM260-207ENST00000555497 EBI3Q14213 229 aa19.17■□□□□ 0.66
TMEM260-207ENST00000555497 REC114Q7Z4M0 266 aa19.17■□□□□ 0.66
TMEM260-207ENST00000555497 S4R3C0 116 aa19.17■□□□□ 0.66
TMEM260-207ENST00000555497 OOSP1A8MZH6 123 aa19.17■□□□□ 0.66
TMEM260-207ENST00000555497 TAS2R60P59551 318 aa19.17■□□□□ 0.66
TMEM260-207ENST00000555497 ZNF562Q6V9R5 426 aa19.17■□□□□ 0.66
TMEM260-207ENST00000555497 PACRGQ96M98 296 aaPredicted RBP19.17■□□□□ 0.66
TMEM260-207ENST00000555497 RASL11BQ9BPW5 248 aa19.17■□□□□ 0.66
TMEM260-207ENST00000555497 OSTCQ9NRP0 149 aa19.17■□□□□ 0.66
TMEM260-207ENST00000555497 HIGD1AQ9Y241 93 aa19.17■□□□□ 0.66
TMEM260-207ENST00000555497 RPEL1Q2QD12 228 aa19.16■□□□□ 0.66
TMEM260-207ENST00000555497 ISLRO14498 428 aa19.16■□□□□ 0.66
TMEM260-207ENST00000555497 DDTP30046 118 aa19.16■□□□□ 0.66
TMEM260-207ENST00000555497 CNN1P51911 297 aaKnown RBP19.16■□□□□ 0.66
TMEM260-207ENST00000555497 RBM14Q96PK6 669 aaKnown RBP19.16■□□□□ 0.66
TMEM260-207ENST00000555497 FANCD2OSQ96PS1 177 aa19.16■□□□□ 0.66
TMEM260-207ENST00000555497 PGPA6NDG6 321 aa19.15■□□□□ 0.66
TMEM260-207ENST00000555497 TSTD3H0UI37 97 aa19.15■□□□□ 0.66
TMEM260-207ENST00000555497 FAM120AOSQ5T036 256 aa19.15■□□□□ 0.66
TMEM260-207ENST00000555497 OR5R1Q8NH85 324 aa19.15■□□□□ 0.66
TMEM260-207ENST00000555497 ARPC1AQ92747 370 aa19.15■□□□□ 0.66
TMEM260-207ENST00000555497 PDLIM4P50479 330 aa19.15■□□□□ 0.66
TMEM260-207ENST00000555497 YPEL3P61236 119 aaPredicted RBP19.15■□□□□ 0.66
TMEM260-207ENST00000555497 OR8I2Q8N0Y5 310 aa19.15■□□□□ 0.66
TMEM260-207ENST00000555497 SLC25A39Q9BZJ4 359 aaPredicted RBP19.15■□□□□ 0.66
TMEM260-207ENST00000555497 EPDR1Q9UM22 224 aa19.15■□□□□ 0.66
TMEM260-207ENST00000555497 TRAV9-1A0A075B6T8 112 aa19.14■□□□□ 0.65
TMEM260-207ENST00000555497 IGHV4-39P01824 125 aa19.14■□□□□ 0.65
TMEM260-207ENST00000555497 CBLN1P23435 193 aa19.14■□□□□ 0.65
TMEM260-207ENST00000555497 MRPL27Q9P0M9 148 aaKnown RBP19.14■□□□□ 0.65
TMEM260-207ENST00000555497 IGSF10Q6WRI0 2623 aa19.14■□□□□ 0.65
TMEM260-207ENST00000555497 SLC25A5P05141 298 aaKnown RBP19.13■□□□□ 0.65
TMEM260-207ENST00000555497 PAX1P15863 534 aa19.13■□□□□ 0.65
TMEM260-207ENST00000555497 TMEM11P17152 192 aa19.13■□□□□ 0.65
TMEM260-207ENST00000555497 AMBPP02760 352 aa19.13■□□□□ 0.65
TMEM260-207ENST00000555497 ADMP35318 185 aa19.13■□□□□ 0.65
TMEM260-207ENST00000555497 UBE2E1P51965 193 aa19.13■□□□□ 0.65
TMEM260-207ENST00000555497 IBA57Q5T440 356 aaKnown RBP19.13■□□□□ 0.65
TMEM260-207ENST00000555497 SGK494Q96LW2 274 aa19.13■□□□□ 0.65
TMEM260-207ENST00000555497 IGLV11-55A0A075B6I3 123 aa19.12■□□□□ 0.65
TMEM260-207ENST00000555497 NPIPB5A8MRT5 1133 aa19.12■□□□□ 0.65
TMEM260-207ENST00000555497 BAGE2Q86Y30 109 aa19.12■□□□□ 0.65
TMEM260-207ENST00000555497 OR1L6Q8NGR2 347 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms