RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 OR5A1Q8NGJ0 315 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 OR51T1Q8NGJ9 327 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 TERB2Q8NHR7 220 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 PPTC7Q8NI37 304 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 CANT1Q8WVQ1 401 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 OR2H1Q9GZK4 316 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 TMEM133Q9H2Q1 129 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 POPDC3Q9HBV1 291 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 WDR90Q96KV7 1748 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 CCDC171Q6TFL3 1326 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 MYH7BA7E2Y1 1941 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 MED23Q9ULK4 1368 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 A0A087X0T9 212 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 A0A1B0GV90 55 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 MDFIC2A0A1B0GVS7 189 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 ODAMA1E959 279 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 ARRDC5A6NEK1 342 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 LINC00587B1AMM8 73 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 C9JAW5 83 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 OVOL1O14753 267 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 SULT1C4O75897 302 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 OR2H2O95918 312 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 FKBP2P26885 142 aaKnown RBP2.38□□□□□ -2.03
VRK1-205ENST00000555402 EVX1P49640 407 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 HINT1P49773 126 aaPredicted RBP2.38□□□□□ -2.03
VRK1-205ENST00000555402 UBE2BP63146 152 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 EIF5AP63241 154 aaKnown RBP2.38□□□□□ -2.03
VRK1-205ENST00000555402 PSG9Q00887 426 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 SLC38A11Q08AI6 406 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 EIF3IQ13347 325 aaKnown RBP2.38□□□□□ -2.03
VRK1-205ENST00000555402 MED1Q15648 1581 aaPredicted RBP2.38□□□□□ -2.03
VRK1-205ENST00000555402 MORN2Q502X0 79 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 C1orf140Q5VVS0 124 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 MIR17HGQ75NE6 70 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 HIST3H2BBQ8N257 126 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 TSTD1Q8NFU3 115 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 OR8D4Q8NGM9 314 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 STAG3L4Q8TBR4 150 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 WFDC5Q8TCV5 224 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 SMCR5Q8TEV8 140 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 MRPS24Q96EL2 167 aaKnown RBP2.38□□□□□ -2.03
VRK1-205ENST00000555402 HIGD1AQ9Y241 93 aa2.38□□□□□ -2.03
VRK1-205ENST00000555402 RBM7Q9Y580 266 aaKnown RBP2.38□□□□□ -2.03
VRK1-205ENST00000555402 N4BP2Q86UW6 1770 aaPredicted RBP2.38□□□□□ -2.03
VRK1-205ENST00000555402 IGHV3-15A0A0B4J1V0 119 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 TRAV5A0A0B4J249 113 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 A0A0D9SEW6 157 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 CCDC160A6NGH7 325 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 K7EP13 123 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 M0R378 163 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 GNRH2O43555 120 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 TNFSF15O95150 251 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 IGKV1-16P04430 117 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 HTR1AP08908 422 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 MPC1LP0DKB6 136 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 P0DMU3 169 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 FAM231AP0DMU4 169 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 FAM231CP0DMU5 169 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 CCL5P13501 91 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 XCL1P47992 114 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 KISS1Q15726 138 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 MIAQ16674 131 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 VMA21Q3ZAQ7 101 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 LHFPL1Q86WI0 220 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 TEX37Q96LM6 180 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 SCGB3A1Q96QR1 104 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 HIST1H2BLQ99880 126 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 GINS4Q9BRT9 223 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 SMIM3Q9BZL3 60 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 YIPF3Q9GZM5 350 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 OTORQ9NRC9 128 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 OSTCQ9NRP0 149 aa2.37□□□□□ -2.03
VRK1-205ENST00000555402 A0A1B0GW64 132 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 A0A1W2PQD3 144 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 J3QQQ9 107 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 DPM2O94777 84 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 APOC1P02654 83 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 MSMBP08118 114 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 CXCL1P09341 107 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 UCHL1P09936 223 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 EIF2B2P49770 351 aaKnown RBP2.36□□□□□ -2.03
VRK1-205ENST00000555402 Q6ZS52 159 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 TCTE3Q8IZS6 198 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 SIGLECL1Q8N7X8 197 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 OR2T10Q8NGZ9 312 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 IMMP2LQ96T52 175 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 NAT8Q9UHE5 227 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 U3KQ87 197 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 ATG2BQ96BY7 2078 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 DOCK4Q8N1I0 1966 aa2.36□□□□□ -2.03
VRK1-205ENST00000555402 TRAPPC8Q9Y2L5 1435 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 MYO16Q9Y6X6 1858 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 A2MP01023 1474 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 CEP164Q9UPV0 1460 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 A0A096LPI6 279 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 MUC21A0A0G2JKD1 596 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 A0A0J9YW62 118 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 LOC107984640A0A0U1RRK4 108 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 MUC21A0A140T8X8 626 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 H3BT86 120 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms