RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 SPSB3Q6PJ21 355 aa8.39□□□□□ -1.07
SHMT2-218ENST00000555213 SLC7A5P1Q8MH63 180 aa8.39□□□□□ -1.07
SHMT2-218ENST00000555213 SCGB1C1Q8TD33 95 aa8.39□□□□□ -1.07
SHMT2-218ENST00000555213 GNPNAT1Q96EK6 184 aaPredicted RBP8.39□□□□□ -1.07
SHMT2-218ENST00000555213 RCC1LQ96I51 464 aaKnown RBP8.39□□□□□ -1.07
SHMT2-218ENST00000555213 TXN2Q99757 166 aa8.39□□□□□ -1.07
SHMT2-218ENST00000555213 NPCDR1Q9BY65 106 aa8.39□□□□□ -1.07
SHMT2-218ENST00000555213 SLC45A2Q9UMX9 530 aa8.39□□□□□ -1.07
SHMT2-218ENST00000555213 S4R3C0 116 aa8.39□□□□□ -1.07
SHMT2-218ENST00000555213 ANK2Q01484 3957 aa8.39□□□□□ -1.07
SHMT2-218ENST00000555213 IGHV3-21A0A0B4J1V1 117 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 LINC00862A6NCI5 91 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 F8W735 103 aaPredicted RBP8.38□□□□□ -1.07
SHMT2-218ENST00000555213 BMPR1BO00238 502 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 OVOL1O14753 267 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 NUPL2O15504 423 aaKnown RBP8.38□□□□□ -1.07
SHMT2-218ENST00000555213 GNG7O60262 68 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 YIF1AO95070 293 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 TRBV12-3P01733 135 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 CLEC3BP05452 202 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 SLURP1P55000 103 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 PRR20EP86478 221 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 PRR20CP86479 221 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 PRR20DP86480 221 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 PRR20BP86481 221 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 PRR20AP86496 221 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 SLC16A13Q7RTY0 426 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 C1QL4Q86Z23 238 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 THAP8Q8NA92 274 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 TMEM116Q8NCL8 245 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 LYPD6BQ8NI32 183 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 RNF141Q8WVD5 230 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 NPIPB3Q92617 1050 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 ZNF414Q96IQ9 312 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 GGTLC1Q9BX51 225 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 RPRMQ9NS64 109 aa8.38□□□□□ -1.07
SHMT2-218ENST00000555213 OR2T8A6NH00 312 aa8.37□□□□□ -1.07
SHMT2-218ENST00000555213 PPP5D1E7EU14 171 aa8.37□□□□□ -1.07
SHMT2-218ENST00000555213 AGPAT2O15120 278 aa8.37□□□□□ -1.07
SHMT2-218ENST00000555213 TGOLN2O43493 480 aa8.37□□□□□ -1.07
SHMT2-218ENST00000555213 MPDU1O75352 247 aa8.37□□□□□ -1.07
SHMT2-218ENST00000555213 FCGR2BP31994 310 aaPredicted RBP8.37□□□□□ -1.07
SHMT2-218ENST00000555213 SERF2P84101 59 aa8.37□□□□□ -1.07
SHMT2-218ENST00000555213 RELQ04864 619 aaPredicted RBP8.37□□□□□ -1.07
SHMT2-218ENST00000555213 ZNF726P1Q15940 193 aa8.37□□□□□ -1.07
SHMT2-218ENST00000555213 EIF5AL1Q6IS14 154 aaKnown RBP8.37□□□□□ -1.07
SHMT2-218ENST00000555213 TEPPQ6URK8 271 aa8.37□□□□□ -1.07
SHMT2-218ENST00000555213 WFDC9Q8NEX5 89 aa8.37□□□□□ -1.07
SHMT2-218ENST00000555213 SAT2Q96F10 170 aaPredicted RBP8.37□□□□□ -1.07
SHMT2-218ENST00000555213 ELOVL1Q9BW60 279 aa8.37□□□□□ -1.07
SHMT2-218ENST00000555213 PEMTQ9UBM1 199 aa8.37□□□□□ -1.07
SHMT2-218ENST00000555213 MGAM2Q2M2H8 2515 aa8.37□□□□□ -1.07
SHMT2-218ENST00000555213 SMCO3A2RU48 225 aa8.36□□□□□ -1.07
SHMT2-218ENST00000555213 SEC14L6B5MCN3 397 aa8.36□□□□□ -1.07
SHMT2-218ENST00000555213 GATA2P23769 480 aaPredicted RBP8.36□□□□□ -1.07
SHMT2-218ENST00000555213 OR10J1P30954 320 aa8.36□□□□□ -1.07
SHMT2-218ENST00000555213 RPL29P47914 159 aaKnown RBP8.36□□□□□ -1.07
SHMT2-218ENST00000555213 SYNJ2BPP57105 145 aa8.36□□□□□ -1.07
SHMT2-218ENST00000555213 FAM106AQ4KMX7 169 aa8.36□□□□□ -1.07
SHMT2-218ENST00000555213 GCSAMLQ5JQS6 135 aa8.36□□□□□ -1.07
SHMT2-218ENST00000555213 MIC13Q5XKP0 118 aa8.36□□□□□ -1.07
SHMT2-218ENST00000555213 SSX7Q7RTT5 188 aa8.36□□□□□ -1.07
SHMT2-218ENST00000555213 RPP25LQ8N5L8 163 aaKnown RBP8.36□□□□□ -1.07
SHMT2-218ENST00000555213 OR4X1Q8NH49 305 aa8.36□□□□□ -1.07
SHMT2-218ENST00000555213 DLX4Q92988 240 aaPredicted RBP8.36□□□□□ -1.07
SHMT2-218ENST00000555213 SLC35E1Q96K37 410 aa8.36□□□□□ -1.07
SHMT2-218ENST00000555213 SCRT1Q9BWW7 348 aa8.36□□□□□ -1.07
SHMT2-218ENST00000555213 MED9Q9NWA0 146 aa8.36□□□□□ -1.07
SHMT2-218ENST00000555213 TRAV30A0A087WSZ9 112 aa8.35□□□□□ -1.07
SHMT2-218ENST00000555213 ZNF705EA8MWA4 302 aaPredicted RBP8.35□□□□□ -1.07
SHMT2-218ENST00000555213 UMAD1C9J7I0 102 aa8.35□□□□□ -1.07
SHMT2-218ENST00000555213 CLN5O75503 358 aa8.35□□□□□ -1.07
SHMT2-218ENST00000555213 OR2C1O95371 312 aa8.35□□□□□ -1.07
SHMT2-218ENST00000555213 CAMLGP49069 296 aa8.35□□□□□ -1.07
SHMT2-218ENST00000555213 RAB5CP51148 216 aa8.35□□□□□ -1.07
SHMT2-218ENST00000555213 RND2P52198 227 aa8.35□□□□□ -1.07
SHMT2-218ENST00000555213 RAB2AP61019 212 aa8.35□□□□□ -1.07
SHMT2-218ENST00000555213 CCL20P78556 96 aa8.35□□□□□ -1.07
SHMT2-218ENST00000555213 ZNF90Q03938 601 aa8.35□□□□□ -1.07
SHMT2-218ENST00000555213 KLF5Q13887 457 aaPredicted RBP8.35□□□□□ -1.07
SHMT2-218ENST00000555213 C9orf66Q5T8R8 295 aa8.35□□□□□ -1.07
SHMT2-218ENST00000555213 GPHB5Q86YW7 130 aa8.35□□□□□ -1.07
SHMT2-218ENST00000555213 OR9G4Q8NGQ1 327 aa8.35□□□□□ -1.07
SHMT2-218ENST00000555213 LRRC20Q8TCA0 184 aa8.35□□□□□ -1.07
SHMT2-218ENST00000555213 MBD3L1Q8WWY6 194 aa8.35□□□□□ -1.07
SHMT2-218ENST00000555213 ACY3Q96HD9 319 aa8.35□□□□□ -1.07
SHMT2-218ENST00000555213 ZNF320A2RRD8 509 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 TEX46H3BTG2 121 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 LGALS9O00182 355 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 SAP30O75446 220 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 EIF3GO75821 320 aaKnown RBP eCLIP8.34□□□□□ -1.07
SHMT2-218ENST00000555213 IGKV1-17P01599 117 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 FABP1P07148 127 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 IGLC1P0CG04 106 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 IGLL1P15814 213 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 INSL3P51460 131 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 RAB14P61106 215 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 AKR1C1Q04828 323 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 FFAR4Q5NUL3 377 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 PXDC1Q5TGL8 231 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms