RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 SIGLEC8Q9NYZ4 499 aa10.81□□□□□ -0.68
SHMT2-217ENST00000555116 PEMTQ9UBM1 199 aa10.81□□□□□ -0.68
SHMT2-217ENST00000555116 PRKDCP78527 4128 aaKnown RBP10.81□□□□□ -0.68
SHMT2-217ENST00000555116 MED6O75586 246 aa10.81□□□□□ -0.68
SHMT2-217ENST00000555116 IGLV1-51P01701 117 aa10.81□□□□□ -0.68
SHMT2-217ENST00000555116 SEC11BP0C7V7 166 aa10.81□□□□□ -0.68
SHMT2-217ENST00000555116 MFAP4P55083 255 aa10.81□□□□□ -0.68
SHMT2-217ENST00000555116 C2orf83Q53S99 150 aa10.81□□□□□ -0.68
SHMT2-217ENST00000555116 SPSB3Q6PJ21 355 aa10.81□□□□□ -0.68
SHMT2-217ENST00000555116 UQCC3Q6UW78 93 aa10.81□□□□□ -0.68
SHMT2-217ENST00000555116 HAPLN4Q86UW8 402 aa10.81□□□□□ -0.68
SHMT2-217ENST00000555116 BPIFCQ8NFQ6 507 aa10.81□□□□□ -0.68
SHMT2-217ENST00000555116 ZNF414Q96IQ9 312 aa10.81□□□□□ -0.68
SHMT2-217ENST00000555116 TXN2Q99757 166 aa10.81□□□□□ -0.68
SHMT2-217ENST00000555116 CORTO00230 105 aa10.8□□□□□ -0.68
SHMT2-217ENST00000555116 SPP1P10451 314 aa10.8□□□□□ -0.68
SHMT2-217ENST00000555116 FAM106AQ4KMX7 169 aa10.8□□□□□ -0.68
SHMT2-217ENST00000555116 Q56UQ5 140 aa10.8□□□□□ -0.68
SHMT2-217ENST00000555116 UNQ9165/PRO28630Q6UXU0 137 aa10.8□□□□□ -0.68
SHMT2-217ENST00000555116 SLC24A4Q8NFF2 622 aa10.8□□□□□ -0.68
SHMT2-217ENST00000555116 RAB40CQ96S21 281 aa10.8□□□□□ -0.68
SHMT2-217ENST00000555116 FNDC4Q9H6D8 234 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-217ENST00000555116 IGHV3-35A0A0C4DH35 117 aa10.79□□□□□ -0.68
SHMT2-217ENST00000555116 C2orf70A6NJV1 201 aa10.79□□□□□ -0.68
SHMT2-217ENST00000555116 A8MWP6 167 aa10.79□□□□□ -0.68
SHMT2-217ENST00000555116 CST7O76096 145 aa10.79□□□□□ -0.68
SHMT2-217ENST00000555116 CTSGP08311 255 aa10.79□□□□□ -0.68
SHMT2-217ENST00000555116 EDN2P20800 178 aa10.79□□□□□ -0.68
SHMT2-217ENST00000555116 BLOC1S1P78537 153 aa10.79□□□□□ -0.68
SHMT2-217ENST00000555116 BAXQ07812 192 aa10.79□□□□□ -0.68
SHMT2-217ENST00000555116 CLINT1Q14677 625 aa10.79□□□□□ -0.68
SHMT2-217ENST00000555116 MLANAQ16655 118 aa10.79□□□□□ -0.68
SHMT2-217ENST00000555116 DTD1Q8TEA8 209 aa10.79□□□□□ -0.68
SHMT2-217ENST00000555116 PRR25Q96S07 402 aa10.79□□□□□ -0.68
SHMT2-217ENST00000555116 HIPK2Q9H2X6 1198 aa10.79□□□□□ -0.68
SHMT2-217ENST00000555116 GAR1Q9NY12 217 aaKnown RBP10.79□□□□□ -0.68
SHMT2-217ENST00000555116 ZNF256Q9Y2P7 627 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-217ENST00000555116 TMEM213A2RRL7 107 aa10.78□□□□□ -0.68
SHMT2-217ENST00000555116 FAM90A26D6RGX4 464 aa10.78□□□□□ -0.68
SHMT2-217ENST00000555116 MRAPQ8TCY5 172 aa10.78□□□□□ -0.68
SHMT2-217ENST00000555116 HRH4Q9H3N8 390 aa10.78□□□□□ -0.68
SHMT2-217ENST00000555116 MRPL36Q9P0J6 103 aaKnown RBP10.78□□□□□ -0.68
SHMT2-217ENST00000555116 ZNF320A2RRD8 509 aa10.78□□□□□ -0.68
SHMT2-217ENST00000555116 SYNGR2O43760 224 aa10.78□□□□□ -0.68
SHMT2-217ENST00000555116 NPY1RP25929 384 aa10.78□□□□□ -0.68
SHMT2-217ENST00000555116 ZNF266Q14584 549 aa10.78□□□□□ -0.68
SHMT2-217ENST00000555116 BTNL8Q6UX41 500 aa10.78□□□□□ -0.68
SHMT2-217ENST00000555116 HSD17B11Q8NBQ5 300 aa10.78□□□□□ -0.68
SHMT2-217ENST00000555116 OR5C1Q8NGR4 320 aa10.78□□□□□ -0.68
SHMT2-217ENST00000555116 TMEM190Q8WZ59 177 aa10.78□□□□□ -0.68
SHMT2-217ENST00000555116 SH3BGRL3Q9H299 93 aa10.78□□□□□ -0.68
SHMT2-217ENST00000555116 FOLR2P14207 255 aa10.77□□□□□ -0.69
SHMT2-217ENST00000555116 OPRK1P41145 380 aa10.77□□□□□ -0.69
SHMT2-217ENST00000555116 Q6ZRG5 221 aa10.77□□□□□ -0.69
SHMT2-217ENST00000555116 RNASEH2CQ8TDP1 164 aaKnown RBP10.77□□□□□ -0.69
SHMT2-217ENST00000555116 NARS2Q96I59 477 aaKnown RBP10.77□□□□□ -0.69
SHMT2-217ENST00000555116 NDUFA4O00483 81 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 NUPL2O15504 423 aaKnown RBP10.76□□□□□ -0.69
SHMT2-217ENST00000555116 IFNA10P01566 189 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 TM4SF20Q53R12 229 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 TMEM217Q8N7C4 229 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 LYPD6BQ8NI32 183 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 CACNG8Q8WXS5 425 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 TMEM218A2RU14 115 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 H3BP45 60 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 GNG7O60262 68 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 APOC3P02656 99 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 IAPPP10997 89 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 CBLN1P23435 193 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 NPBWR1P48145 328 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 SULT1A1P50225 295 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 RAB5CP51148 216 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 ELLP55199 621 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-217ENST00000555116 TAS2R30P59541 319 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 SRSF3P84103 164 aaKnown RBP10.76□□□□□ -0.69
SHMT2-217ENST00000555116 AKR1C1Q04828 323 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 STX12Q86Y82 276 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 OR4X1Q8NH49 305 aa10.76□□□□□ -0.69
SHMT2-217ENST00000555116 IZUMO1RA6ND01 250 aa10.75□□□□□ -0.69
SHMT2-217ENST00000555116 LY86O95711 162 aa10.75□□□□□ -0.69
SHMT2-217ENST00000555116 C8orf88P0DMB2 117 aa10.75□□□□□ -0.69
SHMT2-217ENST00000555116 GP9P14770 177 aa10.75□□□□□ -0.69
SHMT2-217ENST00000555116 ATP6V0CP27449 155 aa10.75□□□□□ -0.69
SHMT2-217ENST00000555116 ATP5IP56385 69 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-217ENST00000555116 DEFB114Q30KQ6 69 aa10.75□□□□□ -0.69
SHMT2-217ENST00000555116 PSENENQ9NZ42 101 aa10.75□□□□□ -0.69
SHMT2-217ENST00000555116 UFC1Q9Y3C8 167 aa10.75□□□□□ -0.69
SHMT2-217ENST00000555116 C15orf62A8K5M9 175 aa10.74□□□□□ -0.69
SHMT2-217ENST00000555116 CLN5O75503 358 aa10.74□□□□□ -0.69
SHMT2-217ENST00000555116 RELQ04864 619 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-217ENST00000555116 OR2K2Q8NGT1 345 aa10.74□□□□□ -0.69
SHMT2-217ENST00000555116 ATP5SQ99766 215 aa10.74□□□□□ -0.69
SHMT2-217ENST00000555116 STRAPQ9Y3F4 350 aaKnown RBP10.74□□□□□ -0.69
SHMT2-217ENST00000555116 LSM4Q9Y4Z0 139 aaKnown RBP10.74□□□□□ -0.69
SHMT2-217ENST00000555116 FHITP49789 147 aa10.74□□□□□ -0.69
SHMT2-217ENST00000555116 CD300EQ496F6 205 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-217ENST00000555116 TMEM182Q6ZP80 229 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-217ENST00000555116 DYNLRB2Q8TF09 96 aa10.74□□□□□ -0.69
SHMT2-217ENST00000555116 CIB3Q96Q77 187 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-217ENST00000555116 TECRQ9NZ01 308 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms