RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 CALYQ9NYX4 217 aa9.01□□□□□ -0.97
VPS33B-204ENST00000554660 M0R1X1 148 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 PAGE4O60829 102 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 FCGR3BO75015 233 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 PROP1O75360 226 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 GCGP01275 180 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 IGHV1-8P0DP01 117 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 AREGP15514 252 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 CD24P25063 80 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 RPL29P47914 159 aaKnown RBP9□□□□□ -0.97
VPS33B-204ENST00000554660 EDDM3BP56851 147 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 PKIAP61925 76 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 HNF4GQ14541 408 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 JOSD1Q15040 202 aaPredicted RBP9□□□□□ -0.97
VPS33B-204ENST00000554660 RTL8BQ17RB0 113 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 OR2B11Q5JQS5 317 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 TCF23Q7RTU1 214 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 TMEM144Q7Z5S9 345 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 OR4X2Q8NGF9 303 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 OR10D4PQ8NGN7 298 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 OR1P1Q8NH06 330 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 RPUSD4Q96CM3 377 aaKnown RBP9□□□□□ -0.97
VPS33B-204ENST00000554660 PACRGQ96M98 296 aaPredicted RBP9□□□□□ -0.97
VPS33B-204ENST00000554660 GGTLC1Q9BX51 225 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 TMEM14BQ9NUH8 114 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 PRNDQ9UKY0 176 aa9□□□□□ -0.97
VPS33B-204ENST00000554660 KBTBD11-OT1A0A1B0GTJ5 212 aa8.99□□□□□ -0.97
VPS33B-204ENST00000554660 C9JCJ5 164 aa8.99□□□□□ -0.97
VPS33B-204ENST00000554660 INS-IGF2F8WCM5 200 aa8.99□□□□□ -0.97
VPS33B-204ENST00000554660 IL6RP08887 468 aaPredicted RBP8.99□□□□□ -0.97
VPS33B-204ENST00000554660 HSPE1P61604 102 aaKnown RBP8.99□□□□□ -0.97
VPS33B-204ENST00000554660 RHOBP62745 196 aa8.99□□□□□ -0.97
VPS33B-204ENST00000554660 LBHQ53QV2 105 aaPredicted RBP8.99□□□□□ -0.97
VPS33B-204ENST00000554660 LINC01551Q86U37 167 aa8.99□□□□□ -0.97
VPS33B-204ENST00000554660 MRPL41Q8IXM3 137 aaKnown RBP8.99□□□□□ -0.97
VPS33B-204ENST00000554660 HIST1H2BLQ99880 126 aa8.99□□□□□ -0.97
VPS33B-204ENST00000554660 GPR61Q9BZJ8 451 aa8.99□□□□□ -0.97
VPS33B-204ENST00000554660 HEYLQ9NQ87 328 aaPredicted RBP8.99□□□□□ -0.97
VPS33B-204ENST00000554660 TMEM140Q9NV12 185 aa8.99□□□□□ -0.97
VPS33B-204ENST00000554660 FKBP11Q9NYL4 201 aa8.99□□□□□ -0.97
VPS33B-204ENST00000554660 PXMP4Q9Y6I8 212 aa8.99□□□□□ -0.97
VPS33B-204ENST00000554660 TRGV10A0A0A0MS01 117 aa8.98□□□□□ -0.97
VPS33B-204ENST00000554660 IGHV2-26A0A0B4J1V2 119 aa8.98□□□□□ -0.97
VPS33B-204ENST00000554660 TSTD3H0UI37 97 aa8.98□□□□□ -0.97
VPS33B-204ENST00000554660 EDDM3AQ14507 147 aa8.98□□□□□ -0.97
VPS33B-204ENST00000554660 COX19Q49B96 90 aa8.98□□□□□ -0.97
VPS33B-204ENST00000554660 FAM71F2Q6NXP2 309 aa8.98□□□□□ -0.97
VPS33B-204ENST00000554660 TEPPQ6URK8 271 aa8.98□□□□□ -0.97
VPS33B-204ENST00000554660 SSX9Q7RTT3 188 aa8.98□□□□□ -0.97
VPS33B-204ENST00000554660 ZNF439Q8NDP4 499 aa8.98□□□□□ -0.97
VPS33B-204ENST00000554660 SLC24A4Q8NFF2 622 aa8.98□□□□□ -0.97
VPS33B-204ENST00000554660 SLC35E1Q96K37 410 aa8.98□□□□□ -0.97
VPS33B-204ENST00000554660 ZNF714Q96N38 554 aa8.98□□□□□ -0.97
VPS33B-204ENST00000554660 U3KQK5 164 aa8.98□□□□□ -0.97
VPS33B-204ENST00000554660 KIAA2026Q5HYC2 2103 aa8.98□□□□□ -0.97
VPS33B-204ENST00000554660 IGHV3-43A0A0B4J1X8 118 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 RBP4P02753 201 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 IGHV3-43DP0DP04 118 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 NPY1RP25929 384 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 GNB1P62873 340 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 RPL19P84098 196 aaKnown RBP8.97□□□□□ -0.97
VPS33B-204ENST00000554660 C17orf58Q2M2W7 97 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 FAM209BQ5JX69 171 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 MINOS1Q5TGZ0 78 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 TPRX1Q8N7U7 411 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 ZNF383Q8NA42 475 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 RFESDQ8TAC1 157 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 TMEM18Q96B42 140 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 RNF2Q99496 336 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 MGST2Q99735 147 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 SLC25A33Q9BSK2 321 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 ENY2Q9NPA8 101 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 MINOS1-NBL1R4GNA1 71 aa8.97□□□□□ -0.97
VPS33B-204ENST00000554660 HUWE1Q7Z6Z7 4374 aaKnown RBP8.97□□□□□ -0.97
VPS33B-204ENST00000554660 AMY1AP04745 511 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 FABP4P15090 132 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 NPPCP23582 126 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 YPEL3P61236 119 aaPredicted RBP8.96□□□□□ -0.98
VPS33B-204ENST00000554660 PRR20EP86478 221 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 PRR20CP86479 221 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 PRR20DP86480 221 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 PRR20BP86481 221 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 PRR20AP86496 221 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 PRCDQ00LT1 54 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 MEF2CQ06413 473 aaPredicted RBP8.96□□□□□ -0.98
VPS33B-204ENST00000554660 C9orf152Q5JTZ5 239 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 C18orf65Q6ZTR6 163 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 C8orf86Q6ZUL3 223 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 C8orf31Q8N9H6 132 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 OR4P4Q8NGL7 312 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 OR5B3Q8NH48 314 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 RHOVQ96L33 236 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 NOL4LQ96MY1 436 aaPredicted RBP8.96□□□□□ -0.98
VPS33B-204ENST00000554660 UHRF2Q96PU4 802 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 CLEC7AQ9BXN2 247 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 TMEM133Q9H2Q1 129 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 TMEM167BQ9NRX6 74 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 BET1LQ9NYM9 111 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 IDI2-AS1Q9NZ38 188 aa8.96□□□□□ -0.98
VPS33B-204ENST00000554660 TRBV9A0A0B4J1U6 114 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms