RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 UBQLN2Q9UHD9 624 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 TP53TG1Q9Y2A0 90 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 LSM5Q9Y4Y9 91 aaKnown RBP6.48□□□□□ -1.37
ACTN1-213ENST00000554508 U3KQ87 197 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 DNAH1Q9P2D7 4330 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 RYR3Q15413 4870 aa6.47□□□□□ -1.37
ACTN1-213ENST00000554508 IGHV3OR16-13A0A075B7E8 117 aa6.47□□□□□ -1.37
ACTN1-213ENST00000554508 IGHV3-49A0A0A0MS15 119 aa6.47□□□□□ -1.37
ACTN1-213ENST00000554508 IGHV3-74A0A0B4J1X5 117 aa6.47□□□□□ -1.37
ACTN1-213ENST00000554508 TRAV2A0A0B4J234 112 aa6.47□□□□□ -1.37
ACTN1-213ENST00000554508 H3BP45 60 aa6.47□□□□□ -1.37
ACTN1-213ENST00000554508 L7N2F9 121 aa6.47□□□□□ -1.37
ACTN1-213ENST00000554508 MBPP02686 304 aaPredicted RBP6.47□□□□□ -1.37
ACTN1-213ENST00000554508 VAMP2P63027 116 aa6.47□□□□□ -1.37
ACTN1-213ENST00000554508 SPANXN5Q5MJ07 72 aa6.47□□□□□ -1.37
ACTN1-213ENST00000554508 ZFAND6Q6FIF0 208 aa6.47□□□□□ -1.37
ACTN1-213ENST00000554508 WFDC3Q8IUB2 231 aa6.47□□□□□ -1.37
ACTN1-213ENST00000554508 STPG3Q8N7X2 389 aa6.47□□□□□ -1.37
ACTN1-213ENST00000554508 OR1S2Q8NGQ3 325 aa6.47□□□□□ -1.37
ACTN1-213ENST00000554508 ST8SIA2Q92186 375 aa6.47□□□□□ -1.37
ACTN1-213ENST00000554508 NARS2Q96I59 477 aaKnown RBP6.47□□□□□ -1.37
ACTN1-213ENST00000554508 METTL26Q96S19 204 aa6.47□□□□□ -1.37
ACTN1-213ENST00000554508 PSENENQ9NZ42 101 aa6.47□□□□□ -1.37
ACTN1-213ENST00000554508 MRPL36Q9P0J6 103 aaKnown RBP6.47□□□□□ -1.37
ACTN1-213ENST00000554508 RCL1Q9Y2P8 373 aaKnown RBP6.47□□□□□ -1.37
ACTN1-213ENST00000554508 AGRNO00468 2067 aa6.46□□□□□ -1.37
ACTN1-213ENST00000554508 IGKV3-7A0A075B6H7 116 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 K7EPK0 472 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 DNASE2O00115 360 aaPredicted RBP6.46□□□□□ -1.38
ACTN1-213ENST00000554508 SPRY2O43597 315 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 DFFBO76075 338 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 IGKV1-17P01599 117 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 IFNA4P05014 189 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 PVALBP20472 110 aaPredicted RBP6.46□□□□□ -1.38
ACTN1-213ENST00000554508 CRYBB3P26998 211 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 TFPI2P48307 235 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 H2BFSP57053 126 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 YPEL3P61236 119 aaPredicted RBP6.46□□□□□ -1.38
ACTN1-213ENST00000554508 RAB11AP62491 216 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 CYCSP99999 105 aaKnown RBP6.46□□□□□ -1.38
ACTN1-213ENST00000554508 RAB32Q13637 225 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 TIGITQ495A1 244 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 LRRC37A5PQ49AS3 106 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 PRSS54Q6PEW0 395 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 Q8WTZ3 238 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 TMEM170AQ8WVE7 144 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 GRAMD2BQ96HH9 432 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 SMIM8Q96KF7 97 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 RAB40CQ96S21 281 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 NMES1Q9C002 83 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 MAP6D1Q9H9H5 199 aa6.46□□□□□ -1.38
ACTN1-213ENST00000554508 STRAPQ9Y3F4 350 aaKnown RBP6.46□□□□□ -1.38
ACTN1-213ENST00000554508 APOHP02749 345 aaPredicted RBP6.45□□□□□ -1.38
ACTN1-213ENST00000554508 IGLC1P0CG04 106 aa6.45□□□□□ -1.38
ACTN1-213ENST00000554508 CXCL3P19876 107 aa6.45□□□□□ -1.38
ACTN1-213ENST00000554508 OR10J1P30954 320 aa6.45□□□□□ -1.38
ACTN1-213ENST00000554508 BCAP31P51572 246 aa6.45□□□□□ -1.38
ACTN1-213ENST00000554508 RND2P52198 227 aa6.45□□□□□ -1.38
ACTN1-213ENST00000554508 RRAS2P62070 204 aaPredicted RBP6.45□□□□□ -1.38
ACTN1-213ENST00000554508 RPL11P62913 178 aaKnown RBP6.45□□□□□ -1.38
ACTN1-213ENST00000554508 FCN2Q15485 313 aa6.45□□□□□ -1.38
ACTN1-213ENST00000554508 APRG1Q8IVJ8 170 aa6.45□□□□□ -1.38
ACTN1-213ENST00000554508 LILRB2Q8N423 598 aa6.45□□□□□ -1.38
ACTN1-213ENST00000554508 GBGT1Q8N5D6 347 aa6.45□□□□□ -1.38
ACTN1-213ENST00000554508 RNF183Q96D59 192 aa6.45□□□□□ -1.38
ACTN1-213ENST00000554508 MS4A6AQ9H2W1 248 aa6.45□□□□□ -1.38
ACTN1-213ENST00000554508 TENM2Q9NT68 2774 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 hCG_2014768A0A024R1R8 64 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 IGHV3-66A0A0C4DH42 116 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 LCE6AA0A183 80 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 HELTA6NFD8 242 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 RLN2P04090 185 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 RPL35AP18077 110 aaKnown RBP6.44□□□□□ -1.38
ACTN1-213ENST00000554508 GPX4P36969 197 aaPredicted RBP6.44□□□□□ -1.38
ACTN1-213ENST00000554508 P2RY1P47900 373 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 EIF2B2P49770 351 aaKnown RBP6.44□□□□□ -1.38
ACTN1-213ENST00000554508 CAV2P51636 162 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 AP2S1P53680 142 aaPredicted RBP6.44□□□□□ -1.38
ACTN1-213ENST00000554508 PAX9P55771 341 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 TAS2R30P59541 319 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 IL15RAQ13261 267 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 DEFB135Q30KP9 77 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 OR8G2PQ6IF36 304 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 OR11H7Q8NGC8 314 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 PPP1R1CQ8WVI7 109 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 NPIPB3Q92617 1050 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 ACY3Q96HD9 319 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 CSTL1Q9H114 145 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 U3KQE9 123 aa6.44□□□□□ -1.38
ACTN1-213ENST00000554508 PLECQ15149 4684 aaKnown RBP6.44□□□□□ -1.38
ACTN1-213ENST00000554508 K7EQG2 157 aa6.43□□□□□ -1.38
ACTN1-213ENST00000554508 TSC22D2O75157 780 aa6.43□□□□□ -1.38
ACTN1-213ENST00000554508 DEDDO75618 318 aa6.43□□□□□ -1.38
ACTN1-213ENST00000554508 TOMM40O96008 361 aa6.43□□□□□ -1.38
ACTN1-213ENST00000554508 HNRNPCP07910 306 aaKnown RBP eCLIP6.43□□□□□ -1.38
ACTN1-213ENST00000554508 METTL15P1P0C7V9 234 aa6.43□□□□□ -1.38
ACTN1-213ENST00000554508 PET100P0DJ07 73 aa6.43□□□□□ -1.38
ACTN1-213ENST00000554508 RD3LP0DJH9 198 aa6.43□□□□□ -1.38
ACTN1-213ENST00000554508 ATF4P18848 351 aaPredicted RBP6.43□□□□□ -1.38
ACTN1-213ENST00000554508 ZNF124Q15973 351 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms