RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 ANKRD34BA5PLL1 514 aa11.19□□□□□ -0.62
SHMT2-210ENST00000553950 LINC01619G3V211 115 aa11.19□□□□□ -0.62
SHMT2-210ENST00000553950 PRR20EP86478 221 aa11.19□□□□□ -0.62
SHMT2-210ENST00000553950 PRR20CP86479 221 aa11.19□□□□□ -0.62
SHMT2-210ENST00000553950 PRR20DP86480 221 aa11.19□□□□□ -0.62
SHMT2-210ENST00000553950 PRR20BP86481 221 aa11.19□□□□□ -0.62
SHMT2-210ENST00000553950 PRR20AP86496 221 aa11.19□□□□□ -0.62
SHMT2-210ENST00000553950 ACOT6Q3I5F7 207 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-210ENST00000553950 FAM106AQ4KMX7 169 aa11.19□□□□□ -0.62
SHMT2-210ENST00000553950 AKR1C8PQ5T2L2 129 aa11.19□□□□□ -0.62
SHMT2-210ENST00000553950 OR5B12Q96R08 314 aa11.19□□□□□ -0.62
SHMT2-210ENST00000553950 RNF2Q99496 336 aa11.19□□□□□ -0.62
SHMT2-210ENST00000553950 CITED1Q99966 193 aa11.19□□□□□ -0.62
SHMT2-210ENST00000553950 SLC25A32Q9H2D1 315 aa11.19□□□□□ -0.62
SHMT2-210ENST00000553950 SLC39A9Q9NUM3 307 aa11.19□□□□□ -0.62
SHMT2-210ENST00000553950 NIPBLQ6KC79 2804 aaeCLIP11.19□□□□□ -0.62
SHMT2-210ENST00000553950 ELOA3CA0A087WX78 387 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-210ENST00000553950 PPP5D1E7EU14 171 aa11.18□□□□□ -0.62
SHMT2-210ENST00000553950 PSG1P11464 419 aa11.18□□□□□ -0.62
SHMT2-210ENST00000553950 BMI1P35226 326 aa11.18□□□□□ -0.62
SHMT2-210ENST00000553950 ADMP35318 185 aa11.18□□□□□ -0.62
SHMT2-210ENST00000553950 RAB5CP51148 216 aa11.18□□□□□ -0.62
SHMT2-210ENST00000553950 PLP1P60201 277 aa11.18□□□□□ -0.62
SHMT2-210ENST00000553950 ZNF90Q03938 601 aa11.18□□□□□ -0.62
SHMT2-210ENST00000553950 FFAR4Q5NUL3 377 aa11.18□□□□□ -0.62
SHMT2-210ENST00000553950 DPPA3Q6W0C5 159 aa11.18□□□□□ -0.62
SHMT2-210ENST00000553950 C12orf54Q6X4T0 127 aa11.18□□□□□ -0.62
SHMT2-210ENST00000553950 C11orf44Q8N8P7 122 aa11.18□□□□□ -0.62
SHMT2-210ENST00000553950 RNF125Q96EQ8 232 aa11.18□□□□□ -0.62
SHMT2-210ENST00000553950 NARS2Q96I59 477 aaKnown RBP11.18□□□□□ -0.62
SHMT2-210ENST00000553950 CHRDL1Q9BU40 450 aa11.18□□□□□ -0.62
SHMT2-210ENST00000553950 PUS1Q9Y606 427 aaKnown RBP eCLIP11.18□□□□□ -0.62
SHMT2-210ENST00000553950 SETD2Q9BYW2 2564 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-210ENST00000553950 COX7A2P2O60397 106 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 IFNA7P01567 189 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 IL4P05112 153 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 M6PRP20645 277 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 MIC13Q5XKP0 118 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 REC114Q7Z4M0 266 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 GPHB5Q86YW7 130 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 C1QL4Q86Z23 238 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 OR4F17Q8NGA8 305 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 OR1N2Q8NGR9 330 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 GATAD1Q8WUU5 269 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 TMEM190Q8WZ59 177 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 OR4F4Q96R69 305 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 ZNF747Q9BV97 191 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 SH3BGRL3Q9H299 93 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 UFC1Q9Y3C8 167 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 BOLA1Q9Y3E2 137 aa11.17□□□□□ -0.62
SHMT2-210ENST00000553950 IGHV4OR15-8A0A075B7B6 117 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 A0A087WW49 117 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 A0A1W2PRX2 142 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 LGALS9O00182 355 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 HYPMO75409 117 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 YIF1AO95070 293 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 TRBV12-3P01733 135 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 HOXD3P31249 432 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-210ENST00000553950 ELLP55199 621 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-210ENST00000553950 LYZP61626 148 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 FHL3Q13643 280 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 TMEM41BQ5BJD5 291 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 SHISA2Q6UWI4 295 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 C8orf86Q6ZUL3 223 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 C3orf56Q8N813 242 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 OR11H1Q8NG94 326 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 LRRC20Q8TCA0 184 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 TMED6Q8WW62 240 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 METTL26Q96S19 204 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 MRPL32Q9BYC8 188 aaKnown RBP11.16□□□□□ -0.62
SHMT2-210ENST00000553950 PEMTQ9UBM1 199 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 RABAC1Q9UI14 185 aa11.16□□□□□ -0.62
SHMT2-210ENST00000553950 WI2-2373I1.2A0A1W2PRP0 233 aa11.15□□□□□ -0.62
SHMT2-210ENST00000553950 A8MWP6 167 aa11.15□□□□□ -0.62
SHMT2-210ENST00000553950 CCL24O00175 119 aa11.15□□□□□ -0.62
SHMT2-210ENST00000553950 MYCNOSP40205 109 aa11.15□□□□□ -0.62
SHMT2-210ENST00000553950 RHOBP62745 196 aa11.15□□□□□ -0.62
SHMT2-210ENST00000553950 TMEM182Q6ZP80 229 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-210ENST00000553950 PBDC1Q9BVG4 233 aa11.15□□□□□ -0.62
SHMT2-210ENST00000553950 TMEM231Q9H6L2 316 aa11.15□□□□□ -0.62
SHMT2-210ENST00000553950 ZFAND3Q9H8U3 227 aa11.15□□□□□ -0.62
SHMT2-210ENST00000553950 DAZ1Q9NQZ3 744 aaKnown RBP11.15□□□□□ -0.62
SHMT2-210ENST00000553950 HIGD1AQ9Y241 93 aa11.15□□□□□ -0.62
SHMT2-210ENST00000553950 ATRQ13535 2644 aa11.14□□□□□ -0.63
SHMT2-210ENST00000553950 PF4P02776 101 aa11.14□□□□□ -0.63
SHMT2-210ENST00000553950 OR5G3P0C626 314 aa11.14□□□□□ -0.63
SHMT2-210ENST00000553950 TAS2R45P59539 299 aa11.14□□□□□ -0.63
SHMT2-210ENST00000553950 NSUN5P1Q3KNT7 163 aa11.14□□□□□ -0.63
SHMT2-210ENST00000553950 C10orf113Q5VZT2 155 aa11.14□□□□□ -0.63
SHMT2-210ENST00000553950 TEX261Q6UWH6 196 aa11.14□□□□□ -0.63
SHMT2-210ENST00000553950 TOMM20LQ6UXN7 152 aa11.14□□□□□ -0.63
SHMT2-210ENST00000553950 OR1B1Q8NGR6 318 aa11.14□□□□□ -0.63
SHMT2-210ENST00000553950 RNF141Q8WVD5 230 aa11.14□□□□□ -0.63
SHMT2-210ENST00000553950 MARC2Q969Z3 335 aa11.14□□□□□ -0.63
SHMT2-210ENST00000553950 UBQLN2Q9UHD9 624 aa11.14□□□□□ -0.63
SHMT2-210ENST00000553950 A0A1W2PPV4 95 aa11.13□□□□□ -0.63
SHMT2-210ENST00000553950 A0A1W2PS18 150 aa11.13□□□□□ -0.63
SHMT2-210ENST00000553950 ADARB2-AS1A8MUL3 147 aa11.13□□□□□ -0.63
SHMT2-210ENST00000553950 TEX46H3BTG2 121 aa11.13□□□□□ -0.63
SHMT2-210ENST00000553950 K7EMT4 169 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms