RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 IGHV3OR16-13A0A075B7E8 117 aa8.67□□□□□ -1.02
SRP54-203ENST00000553544 IGHV3-74A0A0B4J1X5 117 aa8.67□□□□□ -1.02
SRP54-203ENST00000553544 WRBO00258 174 aa8.67□□□□□ -1.02
SRP54-203ENST00000553544 RPL35AP18077 110 aaKnown RBP8.67□□□□□ -1.02
SRP54-203ENST00000553544 NANOS2P60321 138 aaKnown RBP8.67□□□□□ -1.02
SRP54-203ENST00000553544 PRSS54Q6PEW0 395 aa8.67□□□□□ -1.02
SRP54-203ENST00000553544 DTD1Q8TEA8 209 aa8.67□□□□□ -1.02
SRP54-203ENST00000553544 ST8SIA2Q92186 375 aa8.67□□□□□ -1.02
SRP54-203ENST00000553544 RARRES2Q99969 163 aa8.67□□□□□ -1.02
SRP54-203ENST00000553544 MAP6D1Q9H9H5 199 aa8.67□□□□□ -1.02
SRP54-203ENST00000553544 GPN1Q9HCN4 374 aaPredicted RBP8.67□□□□□ -1.02
SRP54-203ENST00000553544 NUDT15Q9NV35 164 aa8.67□□□□□ -1.02
SRP54-203ENST00000553544 FBXL17Q9UF56 701 aa8.67□□□□□ -1.02
SRP54-203ENST00000553544 TRAV30A0A087WSZ9 112 aa8.66□□□□□ -1.02
SRP54-203ENST00000553544 PLA2G10O15496 165 aa8.66□□□□□ -1.02
SRP54-203ENST00000553544 IFNA10P01566 189 aa8.66□□□□□ -1.02
SRP54-203ENST00000553544 CD5P06127 495 aa8.66□□□□□ -1.02
SRP54-203ENST00000553544 HOXB5P09067 269 aa8.66□□□□□ -1.02
SRP54-203ENST00000553544 H2AFB2P0C5Z0 115 aa8.66□□□□□ -1.02
SRP54-203ENST00000553544 IGLC1P0CG04 106 aa8.66□□□□□ -1.02
SRP54-203ENST00000553544 SLC25A4P12235 298 aa8.66□□□□□ -1.02
SRP54-203ENST00000553544 NPY1RP25929 384 aa8.66□□□□□ -1.02
SRP54-203ENST00000553544 RAB11AP62491 216 aa8.66□□□□□ -1.02
SRP54-203ENST00000553544 TCF24Q7RTU0 167 aa8.66□□□□□ -1.02
SRP54-203ENST00000553544 MITD1Q8WV92 249 aa8.66□□□□□ -1.02
SRP54-203ENST00000553544 CSTL1Q9H114 145 aa8.66□□□□□ -1.02
SRP54-203ENST00000553544 VPS13DQ5THJ4 4388 aa8.65□□□□□ -1.02
SRP54-203ENST00000553544 TRAV6A0A075B6T7 132 aa8.65□□□□□ -1.02
SRP54-203ENST00000553544 PRAF2O60831 178 aa8.65□□□□□ -1.02
SRP54-203ENST00000553544 PITX3O75364 302 aa8.65□□□□□ -1.02
SRP54-203ENST00000553544 DFFBO76075 338 aa8.65□□□□□ -1.02
SRP54-203ENST00000553544 NXPH3O95157 252 aa8.65□□□□□ -1.02
SRP54-203ENST00000553544 ANXA7P20073 488 aaKnown RBP8.65□□□□□ -1.02
SRP54-203ENST00000553544 NPPCP23582 126 aa8.65□□□□□ -1.02
SRP54-203ENST00000553544 CRYBB3P26998 211 aa8.65□□□□□ -1.02
SRP54-203ENST00000553544 CMC4P56277 68 aaPredicted RBP8.65□□□□□ -1.02
SRP54-203ENST00000553544 TIGITQ495A1 244 aa8.65□□□□□ -1.02
SRP54-203ENST00000553544 GGNBP1Q5YKI7 109 aa8.65□□□□□ -1.02
SRP54-203ENST00000553544 FLVCR2Q9UPI3 526 aa8.65□□□□□ -1.02
SRP54-203ENST00000553544 U3KQE9 123 aa8.65□□□□□ -1.02
SRP54-203ENST00000553544 TRAV2A0A0B4J234 112 aa8.64□□□□□ -1.03
SRP54-203ENST00000553544 MPTX1A8MV57 137 aa8.64□□□□□ -1.03
SRP54-203ENST00000553544 IGLL5B9A064 214 aa8.64□□□□□ -1.03
SRP54-203ENST00000553544 NKX2-1P43699 371 aaPredicted RBP8.64□□□□□ -1.03
SRP54-203ENST00000553544 TFPI2P48307 235 aa8.64□□□□□ -1.03
SRP54-203ENST00000553544 RND2P52198 227 aa8.64□□□□□ -1.03
SRP54-203ENST00000553544 YPEL3P61236 119 aaPredicted RBP8.64□□□□□ -1.03
SRP54-203ENST00000553544 PAFAH1B2P68402 229 aa8.64□□□□□ -1.03
SRP54-203ENST00000553544 ZNF124Q15973 351 aa8.64□□□□□ -1.03
SRP54-203ENST00000553544 APRG1Q8IVJ8 170 aa8.64□□□□□ -1.03
SRP54-203ENST00000553544 GBGT1Q8N5D6 347 aa8.64□□□□□ -1.03
SRP54-203ENST00000553544 OR1S2Q8NGQ3 325 aa8.64□□□□□ -1.03
SRP54-203ENST00000553544 ZNF431Q8TF32 576 aaPredicted RBP8.64□□□□□ -1.03
SRP54-203ENST00000553544 MS4A6AQ9H2W1 248 aa8.64□□□□□ -1.03
SRP54-203ENST00000553544 RBKSQ9H477 322 aa8.64□□□□□ -1.03
SRP54-203ENST00000553544 TBC1D24Q9ULP9 559 aa8.64□□□□□ -1.03
SRP54-203ENST00000553544 APLNQ9ULZ1 77 aa8.64□□□□□ -1.03
SRP54-203ENST00000553544 AGRNO00468 2067 aa8.64□□□□□ -1.03
SRP54-203ENST00000553544 MUC4Q99102 2169 aa8.63□□□□□ -1.03
SRP54-203ENST00000553544 IGKV3-7A0A075B6H7 116 aa8.63□□□□□ -1.03
SRP54-203ENST00000553544 IGHV3-66A0A0C4DH42 116 aa8.63□□□□□ -1.03
SRP54-203ENST00000553544 A0A1W2PS18 150 aa8.63□□□□□ -1.03
SRP54-203ENST00000553544 SYNGR2O43760 224 aa8.63□□□□□ -1.03
SRP54-203ENST00000553544 FABP1P07148 127 aa8.63□□□□□ -1.03
SRP54-203ENST00000553544 OR10J1P30954 320 aa8.63□□□□□ -1.03
SRP54-203ENST00000553544 OR11H2Q8NH07 326 aa8.63□□□□□ -1.03
SRP54-203ENST00000553544 Q8WTZ3 238 aa8.63□□□□□ -1.03
SRP54-203ENST00000553544 NPIPB3Q92617 1050 aa8.63□□□□□ -1.03
SRP54-203ENST00000553544 NARS2Q96I59 477 aaKnown RBP8.63□□□□□ -1.03
SRP54-203ENST00000553544 SLC35E1Q96K37 410 aa8.63□□□□□ -1.03
SRP54-203ENST00000553544 METTL26Q96S19 204 aa8.63□□□□□ -1.03
SRP54-203ENST00000553544 C11orf68Q9H3H3 251 aaKnown RBP8.63□□□□□ -1.03
SRP54-203ENST00000553544 TMEM231Q9H6L2 316 aa8.63□□□□□ -1.03
SRP54-203ENST00000553544 A0A1B0GVY2 172 aa8.62□□□□□ -1.03
SRP54-203ENST00000553544 C11orf94C9JXX5 98 aa8.62□□□□□ -1.03
SRP54-203ENST00000553544 IL5P05113 134 aa8.62□□□□□ -1.03
SRP54-203ENST00000553544 FAM24BQ8N5W8 94 aa8.62□□□□□ -1.03
SRP54-203ENST00000553544 PKHD1P08F94 4074 aa8.61□□□□□ -1.03
SRP54-203ENST00000553544 K7EQG2 157 aa8.61□□□□□ -1.03
SRP54-203ENST00000553544 TOMM40O96008 361 aa8.61□□□□□ -1.03
SRP54-203ENST00000553544 PVALBP20472 110 aaPredicted RBP8.61□□□□□ -1.03
SRP54-203ENST00000553544 S100A7P31151 101 aa8.61□□□□□ -1.03
SRP54-203ENST00000553544 GPX4P36969 197 aaPredicted RBP8.61□□□□□ -1.03
SRP54-203ENST00000553544 NUP62P37198 522 aaPredicted RBP8.61□□□□□ -1.03
SRP54-203ENST00000553544 P2RY1P47900 373 aa8.61□□□□□ -1.03
SRP54-203ENST00000553544 USF2Q15853 346 aaPredicted RBP8.61□□□□□ -1.03
SRP54-203ENST00000553544 IAH1Q2TAA2 248 aaPredicted RBP8.61□□□□□ -1.03
SRP54-203ENST00000553544 C12orf45Q8N5I9 185 aaPredicted RBP8.61□□□□□ -1.03
SRP54-203ENST00000553544 RAB40CQ96S21 281 aa8.61□□□□□ -1.03
SRP54-203ENST00000553544 PFDN2Q9UHV9 154 aa8.61□□□□□ -1.03
SRP54-203ENST00000553544 STRAPQ9Y3F4 350 aaKnown RBP8.61□□□□□ -1.03
SRP54-203ENST00000553544 IGKV1D-37A0A075B6S9 117 aa8.6□□□□□ -1.03
SRP54-203ENST00000553544 C5orf51A6NDU8 294 aa8.6□□□□□ -1.03
SRP54-203ENST00000553544 SNRPGP15A8MWD9 76 aa8.6□□□□□ -1.03
SRP54-203ENST00000553544 INMT-MINDY4F8WBC2 141 aa8.6□□□□□ -1.03
SRP54-203ENST00000553544 DNASE2O00115 360 aaPredicted RBP8.6□□□□□ -1.03
SRP54-203ENST00000553544 ADAP1O75689 374 aa8.6□□□□□ -1.03
SRP54-203ENST00000553544 HNRNPCP07910 306 aaKnown RBP eCLIP8.6□□□□□ -1.038e-8■■■■□ 23.5
SRP54-203ENST00000553544 DEFB131AP59861 70 aa8.6□□□□□ -1.03
SRP54-203ENST00000553544 RPL11P62913 178 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms