RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 RNF2Q99496 336 aa15.28■□□□□ 0.04
RBFOX1-215ENST00000553186 TECRQ9NZ01 308 aaKnown RBP15.28■□□□□ 0.04
RBFOX1-215ENST00000553186 ELOA3CA0A087WX78 387 aaPredicted RBP15.28■□□□□ 0.04
RBFOX1-215ENST00000553186 PAGE4O60829 102 aa15.28■□□□□ 0.04
RBFOX1-215ENST00000553186 TAGLN2P37802 199 aaKnown RBP15.28■□□□□ 0.04
RBFOX1-215ENST00000553186 RHOGP84095 191 aa15.28■□□□□ 0.04
RBFOX1-215ENST00000553186 VN1R17PQ8TDU5 208 aa15.28■□□□□ 0.04
RBFOX1-215ENST00000553186 FAM167A-AS1Q96KT0 104 aa15.28■□□□□ 0.04
RBFOX1-215ENST00000553186 ORM2P19652 201 aa15.27■□□□□ 0.04
RBFOX1-215ENST00000553186 FCGR2BP31994 310 aaPredicted RBP15.27■□□□□ 0.04
RBFOX1-215ENST00000553186 C15orf32Q32M92 178 aa15.27■□□□□ 0.04
RBFOX1-215ENST00000553186 GNG7O60262 68 aa15.26■□□□□ 0.03
RBFOX1-215ENST00000553186 RD3LP0DJH9 198 aa15.26■□□□□ 0.03
RBFOX1-215ENST00000553186 C8orf88P0DMB2 117 aa15.26■□□□□ 0.03
RBFOX1-215ENST00000553186 SOHLH1Q5JUK2 328 aa15.26■□□□□ 0.03
RBFOX1-215ENST00000553186 OR1B1Q8NGR6 318 aa15.26■□□□□ 0.03
RBFOX1-215ENST00000553186 ZNF355PQ9NSJ1 428 aa15.26■□□□□ 0.03
RBFOX1-215ENST00000553186 TRAV30A0A087WSZ9 112 aa15.26■□□□□ 0.03
RBFOX1-215ENST00000553186 TRAV5A0A0B4J249 113 aa15.26■□□□□ 0.03
RBFOX1-215ENST00000553186 IGHV3-23P01764 117 aa15.26■□□□□ 0.03
RBFOX1-215ENST00000553186 TAS2R45P59539 299 aa15.26■□□□□ 0.03
RBFOX1-215ENST00000553186 PQLC2Q6ZP29 291 aa15.26■□□□□ 0.03
RBFOX1-215ENST00000553186 NECAP1Q8NC96 275 aa15.26■□□□□ 0.03
RBFOX1-215ENST00000553186 SLC25A2Q9BXI2 301 aa15.26■□□□□ 0.03
RBFOX1-215ENST00000553186 VPREB3Q9UKI3 123 aa15.26■□□□□ 0.03
RBFOX1-215ENST00000553186 HYPMO75409 117 aa15.25■□□□□ 0.03
RBFOX1-215ENST00000553186 PPIFP30405 207 aaKnown RBP15.25■□□□□ 0.03
RBFOX1-215ENST00000553186 Q56UQ5 140 aa15.25■□□□□ 0.03
RBFOX1-215ENST00000553186 LINC00305Q7Z4B0 112 aa15.25■□□□□ 0.03
RBFOX1-215ENST00000553186 NOL4LQ96MY1 436 aaPredicted RBP15.25■□□□□ 0.03
RBFOX1-215ENST00000553186 TOMM40O96008 361 aa15.25■□□□□ 0.03
RBFOX1-215ENST00000553186 UBE2G2P60604 165 aa15.25■□□□□ 0.03
RBFOX1-215ENST00000553186 YPEL3P61236 119 aaPredicted RBP15.25■□□□□ 0.03
RBFOX1-215ENST00000553186 FAM90A2PQ658T7 463 aa15.25■□□□□ 0.03
RBFOX1-215ENST00000553186 ZNF502Q8TBZ5 544 aa15.25■□□□□ 0.03
RBFOX1-215ENST00000553186 MS4A10Q96PG2 267 aa15.25■□□□□ 0.03
RBFOX1-215ENST00000553186 TXN2Q99757 166 aa15.25■□□□□ 0.03
RBFOX1-215ENST00000553186 FABP1P07148 127 aa15.24■□□□□ 0.03
RBFOX1-215ENST00000553186 CEBPGP53567 150 aa15.24■□□□□ 0.03
RBFOX1-215ENST00000553186 IL17RELQ6ZVW7 336 aa15.24■□□□□ 0.03
RBFOX1-215ENST00000553186 OR7C2O60412 319 aa15.24■□□□□ 0.03
RBFOX1-215ENST00000553186 NDUFS6O75380 124 aaKnown RBP15.24■□□□□ 0.03
RBFOX1-215ENST00000553186 CTSGP08311 255 aa15.24■□□□□ 0.03
RBFOX1-215ENST00000553186 OR51G1Q8NGK1 321 aa15.24■□□□□ 0.03
RBFOX1-215ENST00000553186 OR2T8A6NH00 312 aa15.23■□□□□ 0.03
RBFOX1-215ENST00000553186 C11orf94C9JXX5 98 aa15.23■□□□□ 0.03
RBFOX1-215ENST00000553186 AP4M1O00189 453 aa15.23■□□□□ 0.03
RBFOX1-215ENST00000553186 HOXA3O43365 443 aaPredicted RBP15.23■□□□□ 0.03
RBFOX1-215ENST00000553186 CD5LO43866 347 aa15.23■□□□□ 0.03
RBFOX1-215ENST00000553186 LYZP61626 148 aa15.23■□□□□ 0.03
RBFOX1-215ENST00000553186 TEX29Q8N6K0 151 aa15.23■□□□□ 0.03
RBFOX1-215ENST00000553186 ZNF491Q8N8L2 437 aa15.23■□□□□ 0.03
RBFOX1-215ENST00000553186 OR5AU1Q8NGC0 362 aa15.23■□□□□ 0.03
RBFOX1-215ENST00000553186 MRPL27Q9P0M9 148 aaKnown RBP15.23■□□□□ 0.03
RBFOX1-215ENST00000553186 YTHDF2Q9Y5A9 579 aaKnown RBP15.23■□□□□ 0.03
RBFOX1-215ENST00000553186 ACANP16112 2415 aa15.23■□□□□ 0.03
RBFOX1-215ENST00000553186 NUPL2O15504 423 aaKnown RBP15.22■□□□□ 0.03
RBFOX1-215ENST00000553186 SNAPINO95295 136 aa15.22■□□□□ 0.03
RBFOX1-215ENST00000553186 ADMP35318 185 aa15.22■□□□□ 0.03
RBFOX1-215ENST00000553186 ATP5G3P48201 142 aa15.22■□□□□ 0.03
RBFOX1-215ENST00000553186 OR4F5Q8NH21 305 aa15.22■□□□□ 0.03
RBFOX1-215ENST00000553186 OR4F4Q96R69 305 aa15.22■□□□□ 0.03
RBFOX1-215ENST00000553186 NKX6-2Q9C056 277 aaPredicted RBP15.22■□□□□ 0.03
RBFOX1-215ENST00000553186 ZNF580Q9UK33 172 aa15.22■□□□□ 0.03
RBFOX1-215ENST00000553186 NOTCH2Q04721 2471 aa15.22■□□□□ 0.03
RBFOX1-215ENST00000553186 TMEM250H0YL14 139 aa15.22■□□□□ 0.03
RBFOX1-215ENST00000553186 BRI3O95415 125 aa15.22■□□□□ 0.03
RBFOX1-215ENST00000553186 CST9LP1Q5W188 147 aa15.22■□□□□ 0.03
RBFOX1-215ENST00000553186 CCDC140Q96MF4 163 aa15.22■□□□□ 0.03
RBFOX1-215ENST00000553186 CHRDL1Q9BU40 450 aa15.22■□□□□ 0.03
RBFOX1-215ENST00000553186 TMEM167BQ9NRX6 74 aa15.22■□□□□ 0.03
RBFOX1-215ENST00000553186 PRELID1Q9Y255 219 aa15.22■□□□□ 0.03
RBFOX1-215ENST00000553186 SONP18583 2426 aaKnown RBP15.21■□□□□ 0.03
RBFOX1-215ENST00000553186 WI2-2373I1.2A0A1W2PRP0 233 aa15.21■□□□□ 0.03
RBFOX1-215ENST00000553186 FAM74A7A6NL05 159 aa15.21■□□□□ 0.03
RBFOX1-215ENST00000553186 OR2C1O95371 312 aa15.21■□□□□ 0.03
RBFOX1-215ENST00000553186 OR10J4P0C629 311 aa15.21■□□□□ 0.03
RBFOX1-215ENST00000553186 KIAA0141Q14154 515 aaPredicted RBP15.21■□□□□ 0.03
RBFOX1-215ENST00000553186 CLRN3Q8NCR9 226 aa15.21■□□□□ 0.03
RBFOX1-215ENST00000553186 HIGD1AQ9Y241 93 aa15.21■□□□□ 0.03
RBFOX1-215ENST00000553186 CFHR3Q02985 330 aa15.21■□□□□ 0.02
RBFOX1-215ENST00000553186 RNF125Q96EQ8 232 aa15.21■□□□□ 0.02
RBFOX1-215ENST00000553186 ZNF414Q96IQ9 312 aa15.21■□□□□ 0.02
RBFOX1-215ENST00000553186 MYO9AB2RTY4 2548 aa15.21■□□□□ 0.02
RBFOX1-215ENST00000553186 IL4P05112 153 aa15.2■□□□□ 0.02
RBFOX1-215ENST00000553186 TXNDC17Q9BRA2 123 aa15.2■□□□□ 0.02
RBFOX1-215ENST00000553186 ARL2-SNX15V9GYD0 113 aa15.2■□□□□ 0.02
RBFOX1-215ENST00000553186 FAM223BA6NKX1 122 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 H3BUA1 57 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 CLEC3BP05452 202 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 PYYP10082 97 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 NPPCP23582 126 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 GPR183P32249 361 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 TMEM95Q3KNT9 176 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 FAM223AQ8IWN6 122 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 SIGLECL1Q8N7X8 197 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 SLC25A39Q9BZJ4 359 aaPredicted RBP15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 TRBV7-1A0A0A6YYK4 115 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 H3BQ15 152 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 IGLV1-40P01703 118 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms