RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 IGHV3OR16-12A0A075B7B8 117 aa8.25□□□□□ -1.09
NEK3-204ENST00000552973 EMP1P54849 157 aa8.25□□□□□ -1.09
NEK3-204ENST00000552973 NUTF2P61970 127 aaKnown RBP8.25□□□□□ -1.09
NEK3-204ENST00000552973 MRPS10P82664 201 aaKnown RBP8.25□□□□□ -1.09
NEK3-204ENST00000552973 SSBP1Q04837 148 aaKnown RBP8.25□□□□□ -1.09
NEK3-204ENST00000552973 SURF2Q15527 256 aaPredicted RBP8.25□□□□□ -1.09
NEK3-204ENST00000552973 NMSQ5H8A3 153 aa8.25□□□□□ -1.09
NEK3-204ENST00000552973 LYZL2Q7Z4W2 148 aa8.25□□□□□ -1.09
NEK3-204ENST00000552973 CLVS1Q8IUQ0 354 aaPredicted RBP8.25□□□□□ -1.09
NEK3-204ENST00000552973 SMIM4Q8WVI0 70 aa8.25□□□□□ -1.09
NEK3-204ENST00000552973 LINC00052Q96N35 136 aa8.25□□□□□ -1.09
NEK3-204ENST00000552973 RBKSQ9H477 322 aa8.25□□□□□ -1.09
NEK3-204ENST00000552973 KCNIP3Q9Y2W7 256 aa8.25□□□□□ -1.09
NEK3-204ENST00000552973 M0R2N4 97 aa8.24□□□□□ -1.09
NEK3-204ENST00000552973 AKR1C4P17516 323 aa8.24□□□□□ -1.09
NEK3-204ENST00000552973 ZNF90Q03938 601 aa8.24□□□□□ -1.09
NEK3-204ENST00000552973 KLF9Q13886 244 aaPredicted RBP8.24□□□□□ -1.09
NEK3-204ENST00000552973 GPR141Q7Z602 305 aa8.24□□□□□ -1.09
NEK3-204ENST00000552973 NOXA1Q86UR1 476 aa8.24□□□□□ -1.09
NEK3-204ENST00000552973 LGI3Q8N145 548 aa8.24□□□□□ -1.09
NEK3-204ENST00000552973 DTD1Q8TEA8 209 aa8.24□□□□□ -1.09
NEK3-204ENST00000552973 RNF125Q96EQ8 232 aa8.24□□□□□ -1.09
NEK3-204ENST00000552973 PRRT1Q99946 306 aa8.24□□□□□ -1.09
NEK3-204ENST00000552973 RNF126Q9BV68 326 aa8.24□□□□□ -1.09
NEK3-204ENST00000552973 C1QTNF4Q9BXJ3 329 aa8.24□□□□□ -1.09
NEK3-204ENST00000552973 WDR12Q9GZL7 423 aaKnown RBP8.24□□□□□ -1.09
NEK3-204ENST00000552973 PLA2G2EQ9NZK7 142 aa8.24□□□□□ -1.09
NEK3-204ENST00000552973 ZFP92A6NM28 416 aa8.23□□□□□ -1.09
NEK3-204ENST00000552973 GSTZ1O43708 216 aaPredicted RBP8.23□□□□□ -1.09
NEK3-204ENST00000552973 HLA-DRB4P13762 266 aa8.23□□□□□ -1.09
NEK3-204ENST00000552973 CCR6P51684 374 aa8.23□□□□□ -1.09
NEK3-204ENST00000552973 OR2F1Q13607 317 aa8.23□□□□□ -1.09
NEK3-204ENST00000552973 SMCO1Q147U7 214 aa8.23□□□□□ -1.09
NEK3-204ENST00000552973 IL22RA2Q969J5 263 aa8.23□□□□□ -1.09
NEK3-204ENST00000552973 MCUBQ9NWR8 336 aa8.23□□□□□ -1.09
NEK3-204ENST00000552973 U3KQ87 197 aa8.23□□□□□ -1.09
NEK3-204ENST00000552973 HLA-DRB4X5D2U9 266 aa8.23□□□□□ -1.09
NEK3-204ENST00000552973 AGRNO00468 2067 aa8.22□□□□□ -1.09
NEK3-204ENST00000552973 IGKV1D-37A0A075B6S9 117 aa8.22□□□□□ -1.09
NEK3-204ENST00000552973 ANKRD20A5PA0PJZ0 165 aa8.22□□□□□ -1.09
NEK3-204ENST00000552973 F6UB75 175 aa8.22□□□□□ -1.09
NEK3-204ENST00000552973 CTDSPLO15194 276 aa8.22□□□□□ -1.09
NEK3-204ENST00000552973 NKX2-1P43699 371 aaPredicted RBP8.22□□□□□ -1.09
NEK3-204ENST00000552973 LYZP61626 148 aa8.22□□□□□ -1.09
NEK3-204ENST00000552973 SUPT4H1P63272 117 aaKnown RBP8.22□□□□□ -1.09
NEK3-204ENST00000552973 GAMTQ14353 236 aa8.22□□□□□ -1.09
NEK3-204ENST00000552973 OR4B1Q8NGF8 309 aa8.22□□□□□ -1.09
NEK3-204ENST00000552973 OR1S1Q8NH92 325 aa8.22□□□□□ -1.09
NEK3-204ENST00000552973 NDUFAF3Q9BU61 184 aa8.22□□□□□ -1.09
NEK3-204ENST00000552973 SEPSECSQ9HD40 501 aaKnown RBP8.22□□□□□ -1.09
NEK3-204ENST00000552973 HSPB7Q9UBY9 170 aa8.22□□□□□ -1.09
NEK3-204ENST00000552973 SCP2D1Q9UJQ7 156 aa8.22□□□□□ -1.09
NEK3-204ENST00000552973 PAIP2BQ9ULR5 123 aaKnown RBP8.22□□□□□ -1.09
NEK3-204ENST00000552973 A0A0B4J2A0 478 aa8.21□□□□□ -1.1
NEK3-204ENST00000552973 AMBPP02760 352 aa8.21□□□□□ -1.1
NEK3-204ENST00000552973 SPART-AS1P0CW21 52 aa8.21□□□□□ -1.1
NEK3-204ENST00000552973 IAPPP10997 89 aa8.21□□□□□ -1.1
NEK3-204ENST00000552973 ID1P41134 155 aa8.21□□□□□ -1.1
NEK3-204ENST00000552973 ALDH3B2P48448 385 aa8.21□□□□□ -1.1
NEK3-204ENST00000552973 ZNF705AQ6ZN79 300 aaPredicted RBP8.21□□□□□ -1.1
NEK3-204ENST00000552973 POM121L12Q8N7R1 296 aa8.21□□□□□ -1.1
NEK3-204ENST00000552973 COQ8AQ8NI60 647 aa8.21□□□□□ -1.1
NEK3-204ENST00000552973 PPP1R14BQ96C90 147 aa8.21□□□□□ -1.1
NEK3-204ENST00000552973 SLC35E1Q96K37 410 aa8.21□□□□□ -1.1
NEK3-204ENST00000552973 SCGB3A2Q96PL1 93 aa8.21□□□□□ -1.1
NEK3-204ENST00000552973 MRPS26Q9BYN8 205 aaKnown RBP8.21□□□□□ -1.1
NEK3-204ENST00000552973 SLC35B3Q9H1N7 401 aa8.21□□□□□ -1.1
NEK3-204ENST00000552973 SAV1Q9H4B6 383 aaPredicted RBP8.21□□□□□ -1.1
NEK3-204ENST00000552973 SHPKQ9UHJ6 478 aa8.21□□□□□ -1.1
NEK3-204ENST00000552973 KIAA1109Q2LD37 5005 aa8.2□□□□□ -1.1
NEK3-204ENST00000552973 SNRPGP15A8MWD9 76 aa8.2□□□□□ -1.1
NEK3-204ENST00000552973 P0DMU3 169 aa8.2□□□□□ -1.1
NEK3-204ENST00000552973 FAM231AP0DMU4 169 aa8.2□□□□□ -1.1
NEK3-204ENST00000552973 FAM231CP0DMU5 169 aa8.2□□□□□ -1.1
NEK3-204ENST00000552973 ANXA3P12429 323 aa8.2□□□□□ -1.1
NEK3-204ENST00000552973 HTN3P15516 51 aa8.2□□□□□ -1.1
NEK3-204ENST00000552973 GPX4P36969 197 aaPredicted RBP8.2□□□□□ -1.1
NEK3-204ENST00000552973 OR8G2PQ6IF36 304 aa8.2□□□□□ -1.1
NEK3-204ENST00000552973 FOXI2Q6ZQN5 318 aa8.2□□□□□ -1.1
NEK3-204ENST00000552973 DYNC2LI1Q8TCX1 351 aa8.2□□□□□ -1.1
NEK3-204ENST00000552973 CACFD1Q9UGQ2 172 aa8.2□□□□□ -1.1
NEK3-204ENST00000552973 PFDN2Q9UHV9 154 aa8.2□□□□□ -1.1
NEK3-204ENST00000552973 IGLV2-18A0A075B6J9 118 aa8.19□□□□□ -1.1
NEK3-204ENST00000552973 A0A1B0GVY2 172 aa8.19□□□□□ -1.1
NEK3-204ENST00000552973 FABP12A6NFH5 140 aa8.19□□□□□ -1.1
NEK3-204ENST00000552973 ZNF705FA8MVS1 300 aaPredicted RBP8.19□□□□□ -1.1
NEK3-204ENST00000552973 SOCS3O14543 225 aa8.19□□□□□ -1.1
NEK3-204ENST00000552973 ZNF705DP0CH99 300 aaPredicted RBP8.19□□□□□ -1.1
NEK3-204ENST00000552973 ZNF705BP0CI00 300 aaPredicted RBP8.19□□□□□ -1.1
NEK3-204ENST00000552973 NUP62P37198 522 aaPredicted RBP8.19□□□□□ -1.1
NEK3-204ENST00000552973 FAM222AQ5U5X8 452 aa8.19□□□□□ -1.1
NEK3-204ENST00000552973 FAM78BQ5VT40 261 aa8.19□□□□□ -1.1
NEK3-204ENST00000552973 LINC00336Q6ZUF6 198 aa8.19□□□□□ -1.1
NEK3-204ENST00000552973 TMED4Q7Z7H5 227 aa8.19□□□□□ -1.1
NEK3-204ENST00000552973 OR8I2Q8N0Y5 310 aa8.19□□□□□ -1.1
NEK3-204ENST00000552973 ZNF709Q8N972 641 aa8.19□□□□□ -1.1
NEK3-204ENST00000552973 NEU1Q99519 415 aa8.19□□□□□ -1.1
NEK3-204ENST00000552973 C7orf50Q9BRJ6 194 aaKnown RBP8.19□□□□□ -1.1
NEK3-204ENST00000552973 IGKV1OR2-108A0A075B7D4 117 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 SMIM9A6NGZ8 99 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms