RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 TNFSF12O43508 249 aa6.53□□□□□ -1.36
TMEM116-217ENST00000552801 CLEC3BP05452 202 aa6.53□□□□□ -1.36
TMEM116-217ENST00000552801 GPR183P32249 361 aa6.53□□□□□ -1.36
TMEM116-217ENST00000552801 BMI1P35226 326 aa6.53□□□□□ -1.36
TMEM116-217ENST00000552801 ERVK-16P61578 105 aa6.53□□□□□ -1.36
TMEM116-217ENST00000552801 Q6ZRG5 221 aa6.53□□□□□ -1.36
TMEM116-217ENST00000552801 CBLN2Q8IUK8 224 aa6.53□□□□□ -1.36
TMEM116-217ENST00000552801 OR2C3Q8N628 320 aa6.53□□□□□ -1.36
TMEM116-217ENST00000552801 STPG3Q8N7X2 389 aa6.53□□□□□ -1.36
TMEM116-217ENST00000552801 TMEM167AQ8TBQ9 72 aa6.53□□□□□ -1.36
TMEM116-217ENST00000552801 TMEM56Q96MV1 263 aa6.53□□□□□ -1.36
TMEM116-217ENST00000552801 SMDT1Q9H4I9 107 aa6.53□□□□□ -1.36
TMEM116-217ENST00000552801 TREM1Q9NP99 234 aa6.53□□□□□ -1.36
TMEM116-217ENST00000552801 MRPL27Q9P0M9 148 aaKnown RBP6.53□□□□□ -1.36
TMEM116-217ENST00000552801 RCL1Q9Y2P8 373 aaKnown RBP6.53□□□□□ -1.36
TMEM116-217ENST00000552801 KCNIP3Q9Y2W7 256 aa6.53□□□□□ -1.36
TMEM116-217ENST00000552801 TMEM56-RWDD3S4R434 201 aa6.53□□□□□ -1.36
TMEM116-217ENST00000552801 BORCS7-ASMTA0A0B4J1R7 106 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 TMEM213A2RRL7 107 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 A8MWP6 167 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 TEX22C9J3V5 150 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 UBE2CO00762 179 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 SPRY2O43597 315 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 PITX3O75364 302 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 PPYP01298 95 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 IFNA4P05014 189 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 AREGP15514 252 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 AKR1C2P52895 323 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 AKR1C1Q04828 323 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 MRGPRG-AS1Q2M3A8 158 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 TMEM88Q6PEY1 159 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 C15orf54Q8N8G6 183 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 ZBTB34Q8NCN2 500 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 GLYATL2Q8WU03 294 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 LINC00476Q8WZB0 136 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 IL22RA2Q969J5 263 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 SPAG8Q99932 426 aaPredicted RBP6.52□□□□□ -1.37
TMEM116-217ENST00000552801 C20orf24Q9BUV8 137 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 HRH4Q9H3N8 390 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 SMCO4Q9NRQ5 59 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 GSKIPQ9P0R6 139 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 CACFD1Q9UGQ2 172 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 MLXQ9UH92 298 aa6.52□□□□□ -1.37
TMEM116-217ENST00000552801 DNAH7Q8WXX0 4024 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 DYNC2H1Q8NCM8 4307 aaKnown RBP6.51□□□□□ -1.37
TMEM116-217ENST00000552801 IGKV1D-13A0A0B4J2D9 117 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 PIGBOS1A0A0B4J2F0 54 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 IGHV3-35A0A0C4DH35 117 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 A0A0J9YWU9 116 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 OR4C46A6NHA9 309 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 COLCA2A8K830 154 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 C9JQL5 133 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 ST8SIA3O43173 380 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 CRYGCP07315 174 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 IL6RP08887 468 aaPredicted RBP6.51□□□□□ -1.37
TMEM116-217ENST00000552801 IGKV1-13P0DP09 117 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 NQO2P16083 231 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 EDN2P20800 178 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 SNCAP37840 140 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 ELLP55199 621 aaPredicted RBP6.51□□□□□ -1.37
TMEM116-217ENST00000552801 FXYD4P59646 89 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 HERV-K104P61576 105 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 RPL30P62888 115 aaKnown RBP6.51□□□□□ -1.37
TMEM116-217ENST00000552801 DEFB135Q30KP9 77 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 RNF212Q495C1 297 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 SLC25A24Q6NUK1 477 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 C19orf35Q6ZS72 473 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 CD300LFQ8TDQ1 290 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 CCDC140Q96MF4 163 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 OVOL2Q9BRP0 275 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 HINT2Q9BX68 163 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 TMEM222Q9H0R3 208 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 TMEM231Q9H6L2 316 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 WFDC1Q9HC57 220 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 BIN3Q9NQY0 253 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 BET1LQ9NYM9 111 aa6.51□□□□□ -1.37
TMEM116-217ENST00000552801 IGLV11-55A0A075B6I3 123 aa6.5□□□□□ -1.37
TMEM116-217ENST00000552801 HPRT1P00492 218 aa6.5□□□□□ -1.37
TMEM116-217ENST00000552801 UCP1P25874 307 aa6.5□□□□□ -1.37
TMEM116-217ENST00000552801 S100A12P80511 92 aa6.5□□□□□ -1.37
TMEM116-217ENST00000552801 EWSR1Q01844 656 aaKnown RBP eCLIP6.5□□□□□ -1.37
TMEM116-217ENST00000552801 BAXQ07812 192 aa6.5□□□□□ -1.37
TMEM116-217ENST00000552801 PEA15Q15121 130 aa6.5□□□□□ -1.37
TMEM116-217ENST00000552801 RHEBQ15382 184 aa6.5□□□□□ -1.37
TMEM116-217ENST00000552801 Q56UQ5 140 aa6.5□□□□□ -1.37
TMEM116-217ENST00000552801 NMSQ5H8A3 153 aa6.5□□□□□ -1.37
TMEM116-217ENST00000552801 CEMP1Q6PRD7 247 aaPredicted RBP6.5□□□□□ -1.37
TMEM116-217ENST00000552801 Q6ZWC4 215 aa6.5□□□□□ -1.37
TMEM116-217ENST00000552801 LYZL2Q7Z4W2 148 aa6.5□□□□□ -1.37
TMEM116-217ENST00000552801 SLC35G3Q8N808 338 aa6.5□□□□□ -1.37
TMEM116-217ENST00000552801 OR51H1Q8NH63 302 aa6.5□□□□□ -1.37
TMEM116-217ENST00000552801 BSCL2Q96G97 398 aaPredicted RBP6.5□□□□□ -1.37
TMEM116-217ENST00000552801 SRSF8Q9BRL6 282 aaKnown RBP6.5□□□□□ -1.37
TMEM116-217ENST00000552801 QTRT1Q9BXR0 403 aaKnown RBP6.5□□□□□ -1.37
TMEM116-217ENST00000552801 DAZ1Q9NQZ3 744 aaKnown RBP6.5□□□□□ -1.37
TMEM116-217ENST00000552801 CCL28Q9NRJ3 127 aa6.5□□□□□ -1.37
TMEM116-217ENST00000552801 LYRM2Q9NU23 88 aaPredicted RBP6.5□□□□□ -1.37
TMEM116-217ENST00000552801 TP53TG1Q9Y2A0 90 aa6.5□□□□□ -1.37
TMEM116-217ENST00000552801 LSM5Q9Y4Y9 91 aaKnown RBP6.5□□□□□ -1.37
TMEM116-217ENST00000552801 RYR2Q92736 4967 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms