RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 GLI3P10071 1580 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 TGIF2-C20orf24A0A0A6YYL0 155 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 A8MWV9 139 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 C17orf112F2Z3M2 114 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 LYRM1O43325 122 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 NDUFB3O43676 98 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 OR1I1O60431 355 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 ATG12O94817 140 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 LYPLA2O95372 231 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 OR10J4P0C629 311 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 SPI1P17947 270 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 LSM3P62310 102 aaKnown RBP0.59□□□□□ -2.31
USP44-207ENST00000552237 UBE2BP63146 152 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 SUPT4H1P63272 117 aaKnown RBP0.59□□□□□ -2.31
USP44-207ENST00000552237 POU6F1Q14863 301 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 TSNQ15631 228 aaKnown RBP0.59□□□□□ -2.31
USP44-207ENST00000552237 C10orf55Q5SWW7 151 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 AKR1C8PQ5T2L2 129 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 SFXN4Q6P4A7 337 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 C4orf22Q6V702 233 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 LINC00311Q8N616 119 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 OR2T35Q8NGX2 323 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 OR10X1Q8NGY0 326 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 OR13C6PQ8NH95 151 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 PPTC7Q8NI37 304 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 SLC25A40Q8TBP6 338 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 ZHX1-C8orf76Q96EF9 292 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 TSPAN32Q96QS1 320 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 TP53RKQ96S44 253 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 SLC25A21Q9BQT8 299 aaPredicted RBP0.59□□□□□ -2.31
USP44-207ENST00000552237 C9orf16Q9BUW7 83 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 OR8D2Q9GZM6 311 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 TCEAL2Q9H3H9 227 aaPredicted RBP0.59□□□□□ -2.31
USP44-207ENST00000552237 UCK1Q9HA47 277 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 CMTM6Q9NX76 183 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 TMEM14CQ9P0S9 112 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 OR52A1Q9UKL2 312 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 PYCARDQ9ULZ3 195 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 HS3ST2Q9Y278 367 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 PKIGQ9Y2B9 76 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 UTP11Q9Y3A2 253 aaKnown RBP0.59□□□□□ -2.31
USP44-207ENST00000552237 PRELID3BQ9Y3B1 194 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 V9GYQ6 96 aa0.59□□□□□ -2.31
USP44-207ENST00000552237 V9GYY5 206 aaPredicted RBP0.59□□□□□ -2.31
USP44-207ENST00000552237 SMARCA4P51532 1647 aa0.59□□□□□ -2.32
USP44-207ENST00000552237 ROS1P08922 2347 aa0.59□□□□□ -2.32
USP44-207ENST00000552237 TECTAO75443 2155 aa0.59□□□□□ -2.32
USP44-207ENST00000552237 ZNF106Q9H2Y7 1883 aaKnown RBP0.58□□□□□ -2.32
USP44-207ENST00000552237 KIF24Q5T7B8 1368 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 MYH2Q9UKX2 1941 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 PIK3C2GO75747 1445 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 TNS3Q68CZ2 1445 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 TRBV19A0A075B6N1 114 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 A0A096LPI6 279 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 TRAV1-1A0A0B4J248 108 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 CCDC160A6NGH7 325 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 H3BRM9 83 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 H7C1C5 153 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 TIMM17BO60830 172 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 CNIH1O95406 144 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 IFNA6P05013 189 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 MIFP14174 115 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 FKBP2P26885 142 aaKnown RBP0.58□□□□□ -2.32
USP44-207ENST00000552237 FXYD6P3P58550 94 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 CDC42P60953 191 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 ARF6P62330 175 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 LCN6P62502 163 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 RANP62826 216 aaKnown RBP0.58□□□□□ -2.32
USP44-207ENST00000552237 RPL19P84098 196 aaKnown RBP0.58□□□□□ -2.32
USP44-207ENST00000552237 TAF1AQ15573 450 aaPredicted RBP0.58□□□□□ -2.32
USP44-207ENST00000552237 ESRGQ1W209 222 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 RNASE10Q5GAN6 216 aaKnown RBP0.58□□□□□ -2.32
USP44-207ENST00000552237 Q6Q795 121 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 TEX261Q6UWH6 196 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.58□□□□□ -2.32
USP44-207ENST00000552237 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.58□□□□□ -2.32
USP44-207ENST00000552237 OR5D16Q8NGK9 328 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 OR5D14Q8NGL3 314 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 OR13D1Q8NGV5 346 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 TERB2Q8NHR7 220 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 PFN4Q8NHR9 129 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 OR2J1Q9GZK6 312 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 CENPHQ9H3R5 247 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 PSTPIP2Q9H939 334 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 RNF122Q9H9V4 155 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 UQCC1Q9NVA1 299 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 MED29Q9NX70 200 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 MRPL27Q9P0M9 148 aaKnown RBP0.58□□□□□ -2.32
USP44-207ENST00000552237 ORMDL1Q9P0S3 153 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 HSPB8Q9UJY1 196 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 TNFSF18Q9UNG2 199 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 LHFPL6Q9Y693 200 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 U3KQ87 197 aa0.58□□□□□ -2.32
USP44-207ENST00000552237 MTUS2Q5JR59 1369 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 DOCK4Q8N1I0 1966 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 WRNQ14191 1432 aaPredicted RBP eCLIP0.57□□□□□ -2.32
USP44-207ENST00000552237 UHRF1BP1Q6BDS2 1440 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 ZNF469Q96JG9 3925 aaPredicted RBP0.57□□□□□ -2.32
USP44-207ENST00000552237 NCOA6Q14686 2063 aaPredicted RBP0.57□□□□□ -2.32
USP44-207ENST00000552237 NCAPD3P42695 1498 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms