RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 CAV3P56539 151 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 TAS2R43P59537 309 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 HAMPP81172 84 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 ATP5G2Q06055 141 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 SYCNQ0VAF6 134 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 BTN1A1Q13410 526 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 MADCAM1Q13477 382 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 ZFP1Q6P2D0 407 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 DRAM2Q6UX65 266 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 ZNF767PQ75MW2 155 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 FA2HQ7L5A8 372 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 DCXRQ7Z4W1 244 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 SPATA12Q7Z6I5 190 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 SLC35E3Q7Z769 313 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 LINC00596Q86U02 117 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 SLC25A29Q8N8R3 303 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 GATD1Q8NB37 220 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 OR5T1Q8NG75 326 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 OR11H6Q8NGC7 330 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 OR5K1Q8NHB7 308 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 CYGBQ8WWM9 190 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 L3HYPDHQ96EM0 354 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 MRPL57Q9BQC6 102 aaKnown RBP2.46□□□□□ -2.02
LIMA1-208ENST00000551691 ADAT1Q9BUB4 502 aaKnown RBP2.46□□□□□ -2.02
LIMA1-208ENST00000551691 CHCHD7Q9BUK0 85 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 FBXL15Q9H469 300 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 ZNF355PQ9NSJ1 428 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 C21orf62Q9NYP8 219 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 TMEM216Q9P0N5 145 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 OR6C6A6NF89 314 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 C17orf98A8MV24 154 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 H7C1C5 153 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 DEFB4AO15263 64 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 CXorf1O96002 111 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 CTLA4P16410 223 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 PSMB8P28062 276 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 RPL14P50914 215 aaKnown RBP2.45□□□□□ -2.02
LIMA1-208ENST00000551691 PCBD1P61457 104 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 LCN6P62502 163 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 HPCAP84074 193 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 GNA13Q14344 377 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 SSX1Q16384 188 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 TIFABQ6ZNK6 161 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 LRRC34Q8IZ02 419 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 ORMDL3Q8N138 153 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 C5orf56Q8N8D9 126 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 ZNF565Q8N9K5 539 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 OR1M1Q8NGA1 313 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 OR13D1Q8NGV5 346 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 STOML3Q8TAV4 291 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 FAM104AQ969W3 186 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 APOBEC3DQ96AK3 386 aaPredicted RBP2.45□□□□□ -2.02
LIMA1-208ENST00000551691 GPR82Q96P67 336 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 SPACA5Q96QH8 159 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 ARL6Q9H0F7 186 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 VCXQ9H320 206 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 C8orf17Q9NRJ1 99 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 MARCOQ9UEW3 520 aaPredicted RBP2.45□□□□□ -2.02
LIMA1-208ENST00000551691 C14orf166Q9Y224 244 aaKnown RBP2.45□□□□□ -2.02
LIMA1-208ENST00000551691 TNXBP22105 4242 aa2.45□□□□□ -2.02
LIMA1-208ENST00000551691 TRAV8-3A0A0A6YYJ7 113 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 IGHV2-26A0A0B4J1V2 119 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 PGPA6NDG6 321 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 GGT3PA6NGU5 568 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 OR11H12B2RN74 326 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 G3V318 75 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 H0Y980 276 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 ATP5HO75947 161 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 IFNA4P05014 189 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 IL4P05112 153 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 COX5BP10606 129 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 PRPS1L1P21108 318 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 CFL1P23528 166 aaKnown RBP2.44□□□□□ -2.02
LIMA1-208ENST00000551691 BRS3P32247 399 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 OPRK1P41145 380 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 CDKN2CP42773 168 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 KIR3DL2P43630 455 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 HSPA13P48723 471 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 MEF2CQ06413 473 aaPredicted RBP2.44□□□□□ -2.02
LIMA1-208ENST00000551691 RPL18Q07020 188 aaKnown RBP2.44□□□□□ -2.02
LIMA1-208ENST00000551691 DIAPH2-AS1Q14236 149 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 LGALS9BQ3B8N2 356 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 Q499Y3 187 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 LIN52Q52LA3 116 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 MINOS1Q5TGZ0 78 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 LCN8Q6JVE9 175 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 FRZBQ92765 325 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 KCTD7Q96MP8 289 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 LINC01587Q99440 93 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 HSPB9Q9BQS6 159 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 SCRT1Q9BWW7 348 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 RERGLQ9H628 205 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 CELA1Q9UNI1 258 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 MINOS1-NBL1R4GNA1 71 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 HSPE1-MOB4S4R3N1 261 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 DNAH8Q96JB1 4490 aa2.44□□□□□ -2.02
LIMA1-208ENST00000551691 LPAP08519 4548 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 IGHV3-72A0A0B4J1Y9 119 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 ARRDC5A6NEK1 342 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 METTL15A6NJ78 407 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms