RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 KLK11Q9UBX7 282 aa9.82□□□□□ -0.84
VPS29-209ENST00000551655 TRAV12-2A0A075B6T6 113 aa9.81□□□□□ -0.84
VPS29-209ENST00000551655 TRAV18A0A075B6X5 111 aa9.81□□□□□ -0.84
VPS29-209ENST00000551655 ZNF701M0R085 212 aaPredicted RBP9.81□□□□□ -0.84
VPS29-209ENST00000551655 ATP5HO75947 161 aa9.81□□□□□ -0.84
VPS29-209ENST00000551655 INSP01308 110 aa9.81□□□□□ -0.84
VPS29-209ENST00000551655 M6PRP20645 277 aa9.81□□□□□ -0.84
VPS29-209ENST00000551655 MYL9P24844 172 aa9.81□□□□□ -0.84
VPS29-209ENST00000551655 TSPOP30536 169 aa9.81□□□□□ -0.84
VPS29-209ENST00000551655 OR10J1P30954 320 aa9.81□□□□□ -0.84
VPS29-209ENST00000551655 ID1P41134 155 aa9.81□□□□□ -0.84
VPS29-209ENST00000551655 ETV6P41212 452 aa9.81□□□□□ -0.84
VPS29-209ENST00000551655 RFX2P48378 723 aa9.81□□□□□ -0.84
VPS29-209ENST00000551655 MLLT11Q13015 90 aaPredicted RBP9.81□□□□□ -0.84
VPS29-209ENST00000551655 OR1S2Q8NGQ3 325 aa9.81□□□□□ -0.84
VPS29-209ENST00000551655 DAPK2Q9UIK4 370 aa9.81□□□□□ -0.84
VPS29-209ENST00000551655 TRAV30A0A087WSZ9 112 aa9.8□□□□□ -0.84
VPS29-209ENST00000551655 SIVA1O15304 175 aa9.8□□□□□ -0.84
VPS29-209ENST00000551655 SCGB2A1O75556 95 aa9.8□□□□□ -0.84
VPS29-209ENST00000551655 HTN1P15515 57 aa9.8□□□□□ -0.84
VPS29-209ENST00000551655 YPEL3P61236 119 aaPredicted RBP9.8□□□□□ -0.84
VPS29-209ENST00000551655 PRSS54Q6PEW0 395 aa9.8□□□□□ -0.84
VPS29-209ENST00000551655 OR51G1Q8NGK1 321 aa9.8□□□□□ -0.84
VPS29-209ENST00000551655 OR6F1Q8NGZ6 308 aa9.8□□□□□ -0.84
VPS29-209ENST00000551655 BORCS5Q969J3 196 aa9.8□□□□□ -0.84
VPS29-209ENST00000551655 NOP10Q9NPE3 64 aaKnown RBP9.8□□□□□ -0.84
VPS29-209ENST00000551655 DOK5Q9P104 306 aa9.8□□□□□ -0.84
VPS29-209ENST00000551655 IGLV5-52A0A0A0MRZ9 124 aa9.79□□□□□ -0.84
VPS29-209ENST00000551655 A8MTW9 85 aa9.79□□□□□ -0.84
VPS29-209ENST00000551655 GPR31O00270 319 aa9.79□□□□□ -0.84
VPS29-209ENST00000551655 NXPH3O95157 252 aa9.79□□□□□ -0.84
VPS29-209ENST00000551655 SUB1P53999 127 aaKnown RBP eCLIP9.79□□□□□ -0.84
VPS29-209ENST00000551655 SPATA31B1PQ5VZV4 182 aa9.79□□□□□ -0.84
VPS29-209ENST00000551655 TBC1D26Q86UD7 250 aa9.79□□□□□ -0.84
VPS29-209ENST00000551655 CMTM1Q8IZ96 169 aa9.79□□□□□ -0.84
VPS29-209ENST00000551655 OR11H7Q8NGC8 314 aa9.79□□□□□ -0.84
VPS29-209ENST00000551655 MGLLQ99685 303 aa9.79□□□□□ -0.84
VPS29-209ENST00000551655 RHBDL2Q9NX52 303 aa9.79□□□□□ -0.84
VPS29-209ENST00000551655 A0A0B4J293 547 aa9.78□□□□□ -0.84
VPS29-209ENST00000551655 INS-IGF2F8WCM5 200 aa9.78□□□□□ -0.84
VPS29-209ENST00000551655 GSTZ1O43708 216 aaPredicted RBP9.78□□□□□ -0.84
VPS29-209ENST00000551655 IGKV1-5P01602 117 aa9.78□□□□□ -0.84
VPS29-209ENST00000551655 PMP2P02689 132 aa9.78□□□□□ -0.84
VPS29-209ENST00000551655 RPL5P46777 297 aaKnown RBP9.78□□□□□ -0.84
VPS29-209ENST00000551655 C22orf42Q6IC83 251 aa9.78□□□□□ -0.84
VPS29-209ENST00000551655 PBDC1Q9BVG4 233 aa9.78□□□□□ -0.84
VPS29-209ENST00000551655 A0A096LPF7 62 aa9.77□□□□□ -0.85
VPS29-209ENST00000551655 SCGNO76038 276 aa9.77□□□□□ -0.85
VPS29-209ENST00000551655 HSPA13P48723 471 aa9.77□□□□□ -0.85
VPS29-209ENST00000551655 CNN1P51911 297 aaKnown RBP9.77□□□□□ -0.85
VPS29-209ENST00000551655 BSXQ3C1V8 233 aa9.77□□□□□ -0.85
VPS29-209ENST00000551655 DHRS11Q6UWP2 260 aa9.77□□□□□ -0.85
VPS29-209ENST00000551655 OR5H6Q8NGV6 325 aa9.77□□□□□ -0.85
VPS29-209ENST00000551655 SLC25A38Q96DW6 304 aa9.77□□□□□ -0.85
VPS29-209ENST00000551655 LINC01587Q99440 93 aa9.77□□□□□ -0.85
VPS29-209ENST00000551655 TIMM8BQ9Y5J9 83 aaPredicted RBP9.77□□□□□ -0.85
VPS29-209ENST00000551655 NXPH4O95158 308 aa9.76□□□□□ -0.85
VPS29-209ENST00000551655 TOMM40O96008 361 aa9.76□□□□□ -0.85
VPS29-209ENST00000551655 RD3LP0DJH9 198 aa9.76□□□□□ -0.85
VPS29-209ENST00000551655 PSG1P11464 419 aa9.76□□□□□ -0.85
VPS29-209ENST00000551655 NPIPB3Q92617 1050 aa9.76□□□□□ -0.85
VPS29-209ENST00000551655 SLC25A39Q9BZJ4 359 aaPredicted RBP9.76□□□□□ -0.85
VPS29-209ENST00000551655 AUNIPQ9H7T9 357 aa9.76□□□□□ -0.85
VPS29-209ENST00000551655 RPRMQ9NS64 109 aa9.76□□□□□ -0.85
VPS29-209ENST00000551655 PKHD1L1Q86WI1 4243 aa9.75□□□□□ -0.85
VPS29-209ENST00000551655 GAGE12BA1L429 117 aa9.75□□□□□ -0.85
VPS29-209ENST00000551655 NOTOA8MTQ0 251 aa9.75□□□□□ -0.85
VPS29-209ENST00000551655 ISLRO14498 428 aa9.75□□□□□ -0.85
VPS29-209ENST00000551655 GAGE7O76087 117 aa9.75□□□□□ -0.85
VPS29-209ENST00000551655 OXTP01178 125 aa9.75□□□□□ -0.85
VPS29-209ENST00000551655 GAGE12FP0CL80 117 aa9.75□□□□□ -0.85
VPS29-209ENST00000551655 GAGE12GP0CL81 117 aa9.75□□□□□ -0.85
VPS29-209ENST00000551655 GAGE12IP0CL82 117 aa9.75□□□□□ -0.85
VPS29-209ENST00000551655 PRB4P10163 310 aaPredicted RBP9.75□□□□□ -0.85
VPS29-209ENST00000551655 IGFL4Q6B9Z1 124 aa9.75□□□□□ -0.85
VPS29-209ENST00000551655 C16orf74Q96GX8 76 aa9.75□□□□□ -0.85
VPS29-209ENST00000551655 ACY3Q96HD9 319 aa9.75□□□□□ -0.85
VPS29-209ENST00000551655 VSIG2Q96IQ7 327 aa9.75□□□□□ -0.85
VPS29-209ENST00000551655 TAS2R20P59543 309 aa9.74□□□□□ -0.85
VPS29-209ENST00000551655 KRTAP10-4P60372 401 aaPredicted RBP9.74□□□□□ -0.85
VPS29-209ENST00000551655 NFE4Q86UQ8 179 aa9.74□□□□□ -0.85
VPS29-209ENST00000551655 PACRGLQ8N7B6 248 aa9.74□□□□□ -0.85
VPS29-209ENST00000551655 OR10J6PQ8NGY7 276 aa9.74□□□□□ -0.85
VPS29-209ENST00000551655 C16orf92Q96LL3 132 aa9.74□□□□□ -0.85
VPS29-209ENST00000551655 ENY2Q9NPA8 101 aa9.74□□□□□ -0.85
VPS29-209ENST00000551655 IFT46Q9NQC8 304 aa9.74□□□□□ -0.85
VPS29-209ENST00000551655 SCN3BQ9NY72 215 aa9.74□□□□□ -0.85
VPS29-209ENST00000551655 RRP15Q9Y3B9 282 aaKnown RBP9.74□□□□□ -0.85
VPS29-209ENST00000551655 A0A0G2JRQ6 117 aa9.73□□□□□ -0.85
VPS29-209ENST00000551655 UCP1P25874 307 aa9.73□□□□□ -0.85
VPS29-209ENST00000551655 B2MP61769 119 aa9.73□□□□□ -0.85
VPS29-209ENST00000551655 TMEM144Q7Z5S9 345 aa9.73□□□□□ -0.85
VPS29-209ENST00000551655 TMED4Q7Z7H5 227 aa9.73□□□□□ -0.85
VPS29-209ENST00000551655 LINC00612Q8N6U2 182 aa9.73□□□□□ -0.85
VPS29-209ENST00000551655 RNASE8Q8TDE3 154 aaKnown RBP9.73□□□□□ -0.85
VPS29-209ENST00000551655 TMEM170AQ8WVE7 144 aa9.73□□□□□ -0.85
VPS29-209ENST00000551655 PDCD10Q9BUL8 212 aa9.73□□□□□ -0.85
VPS29-209ENST00000551655 TMPRSS5Q9H3S3 457 aa9.73□□□□□ -0.85
VPS29-209ENST00000551655 FAM212BQ9NTI7 297 aaPredicted RBP9.73□□□□□ -0.85
VPS29-209ENST00000551655 TRDV1A0A1B0GX56 115 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms