RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 ADIPOQQ15848 244 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 C12orf74Q32Q52 190 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 C5orf47Q569G3 176 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 TMEM78Q5T7P6 136 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 ZFAND6Q6FIF0 208 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 C17orf99Q6UX52 265 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 PCP2Q8IVA1 136 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 CEND1Q8N111 149 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 PPDPFLQ8WWR9 84 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 RND1Q92730 232 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 RAB37Q96AX2 223 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 NUDT22Q9BRQ3 303 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 ANAPC13Q9BS18 74 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 MCRIP2Q9BUT9 160 aaKnown RBP4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 DLL3Q9NYJ7 618 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 B4GALT7Q9UBV7 327 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 TCF19Q9Y242 345 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 SELENOKQ9Y6D0 94 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 MYOFQ9NZM1 2061 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 RALGAPA1Q6GYQ0 2036 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 TRBV7-3A0A075B6L6 115 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 TEX50A0A1B0GTY4 177 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 WI2-2373I1.2A0A1W2PRP0 233 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 PRSS29PA6NIE9 313 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 C17orf98A8MV24 154 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 HIGD1CA8MV81 97 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 KLK10O43240 276 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 RBP4P02753 201 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 MGST1P10620 155 aaKnown RBP4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 EVI2AP22794 236 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 PRTN3P24158 256 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 COL8A2P25067 703 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 G6PCP35575 357 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 ARL3P36405 182 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 NDUFV3P56181 108 aaKnown RBP4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 PPP1CAP62136 330 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 GNG3P63215 75 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 PSG5Q15238 335 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 CST6Q15828 149 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 SPRNQ5BIV9 151 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 MORN3Q6PF18 240 aaPredicted RBP4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 ZNF497Q6ZNH5 498 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 ZNF329Q86UD4 541 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 C1orf210Q8IVY1 113 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 FADS6Q8N9I5 356 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 TMEM178AQ8NBL3 297 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 CCL4L1Q8NHW4 92 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 GLMPQ8WWB7 406 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 RASL10AQ92737 203 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 PTH2Q96A98 100 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 DNAJC30Q96LL9 226 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 LINC01587Q99440 93 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 HINT2Q9BX68 163 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 TMEM126AQ9H061 195 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 ZNF355PQ9NSJ1 428 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 HRASLS2Q9NWW9 162 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 HHLA3Q9XRX5 114 aa4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 CSDC2Q9Y534 153 aaKnown RBP4.23□□□□□ -1.73
LSM3P2-201ENST00000551246 TRAV25A0A0B4J276 109 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 TMEM262E9PQX1 116 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 K7ERJ3 54 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 FCN3O75636 299 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 APOMO95445 188 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 C8orf88P0DMB2 117 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 MYOD1P15172 320 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 CA6P23280 308 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 ASIPP42127 132 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 CSN1S1P47710 185 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 FOXG1P55316 489 aaPredicted RBP4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 ATP5J2P56134 94 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 ATP5IP56385 69 aaPredicted RBP4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 UBE2D3P61077 147 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 RPS16P62249 146 aaKnown RBP4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 UBE2D2P62837 147 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 SRYQ05066 204 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 CARD17Q5XLA6 110 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 LINC00322Q6ZN03 302 aaPredicted RBP4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 ZNF493Q6ZR52 646 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 LINC00696Q6ZRV3 163 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 RBPMS2Q6ZRY4 209 aaKnown RBP4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 MOB3BQ86TA1 216 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 TEN1Q86WV5 123 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 MKXQ8IYA7 352 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 NFAM1Q8NET5 270 aaPredicted RBP4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 ITLN1Q8WWA0 313 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 TMEM190Q8WZ59 177 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 LINC00479Q96M42 142 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 ZNF488Q96MN9 340 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 CHAC1Q9BUX1 264 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 PPDPFQ9H3Y8 114 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 RPP21Q9H633 154 aaKnown RBP4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 SIGLEC9Q9Y336 463 aa4.22□□□□□ -1.73
LSM3P2-201ENST00000551246 TRBV25-1A0A075B6N4 114 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 IGKV2D-26A0A0A0MRZ7 120 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 KIR2DS5A0A0G2JLQ3 304 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 A0A0G2JNG1 304 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 NPIPB5A8MRT5 1133 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 TMEM150CB9EJG8 249 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 PEX7O00628 323 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms