RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 MRPS10P82664 201 aaKnown RBP9.22□□□□□ -0.93
PTCH1-221ENST00000550914 MEF2DQ14814 521 aa9.22□□□□□ -0.93
PTCH1-221ENST00000550914 LGALS9BQ3B8N2 356 aa9.22□□□□□ -0.93
PTCH1-221ENST00000550914 SELENOHQ8IZQ5 122 aaKnown RBP9.22□□□□□ -0.93
PTCH1-221ENST00000550914 LHFPL5Q8TAF8 219 aa9.22□□□□□ -0.93
PTCH1-221ENST00000550914 TMEM170AQ8WVE7 144 aa9.22□□□□□ -0.93
PTCH1-221ENST00000550914 CLUHP3Q96NS8 147 aa9.22□□□□□ -0.93
PTCH1-221ENST00000550914 RTBDNQ9BSG5 229 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-221ENST00000550914 PFDN2Q9UHV9 154 aa9.22□□□□□ -0.93
PTCH1-221ENST00000550914 TEX48A0A1B0GUV7 120 aa9.21□□□□□ -0.94
PTCH1-221ENST00000550914 SPART-AS1P0CW21 52 aa9.21□□□□□ -0.94
PTCH1-221ENST00000550914 NMSQ5H8A3 153 aa9.21□□□□□ -0.94
PTCH1-221ENST00000550914 GPR107Q5VW38 600 aa9.21□□□□□ -0.94
PTCH1-221ENST00000550914 NPIPB3Q92617 1050 aa9.21□□□□□ -0.94
PTCH1-221ENST00000550914 IL22RA2Q969J5 263 aa9.21□□□□□ -0.94
PTCH1-221ENST00000550914 GPR146Q96CH1 333 aa9.21□□□□□ -0.94
PTCH1-221ENST00000550914 TMEM56-RWDD3S4R434 201 aa9.21□□□□□ -0.94
PTCH1-221ENST00000550914 U3KQ87 197 aa9.21□□□□□ -0.94
PTCH1-221ENST00000550914 CRYM-AS1A6NIL9 109 aa9.2□□□□□ -0.94
PTCH1-221ENST00000550914 RTL8CO15255 209 aa9.2□□□□□ -0.94
PTCH1-221ENST00000550914 NXPH3O95157 252 aa9.2□□□□□ -0.94
PTCH1-221ENST00000550914 SULT1A3P0DMM9 295 aa9.2□□□□□ -0.94
PTCH1-221ENST00000550914 SULT1A4P0DMN0 295 aa9.2□□□□□ -0.94
PTCH1-221ENST00000550914 PSG1P11464 419 aa9.2□□□□□ -0.94
PTCH1-221ENST00000550914 ATP5IP56385 69 aaPredicted RBP9.2□□□□□ -0.94
PTCH1-221ENST00000550914 CTF1Q16619 201 aa9.2□□□□□ -0.94
PTCH1-221ENST00000550914 TMEM268Q5VZI3 342 aa9.2□□□□□ -0.94
PTCH1-221ENST00000550914 SPATA31B1PQ5VZV4 182 aa9.2□□□□□ -0.94
PTCH1-221ENST00000550914 OR8G2PQ6IF36 304 aa9.2□□□□□ -0.94
PTCH1-221ENST00000550914 ZNF767PQ75MW2 155 aa9.2□□□□□ -0.94
PTCH1-221ENST00000550914 OR51G1Q8NGK1 321 aa9.2□□□□□ -0.94
PTCH1-221ENST00000550914 ACY3Q96HD9 319 aa9.2□□□□□ -0.94
PTCH1-221ENST00000550914 GPR132Q9UNW8 380 aa9.2□□□□□ -0.94
PTCH1-221ENST00000550914 PRSS29PA6NIE9 313 aa9.19□□□□□ -0.94
PTCH1-221ENST00000550914 DISC1C4P0D8 188 aa9.19□□□□□ -0.94
PTCH1-221ENST00000550914 ID1P41134 155 aa9.19□□□□□ -0.94
PTCH1-221ENST00000550914 C1orf194Q5T5A4 169 aa9.19□□□□□ -0.94
PTCH1-221ENST00000550914 FOXI2Q6ZQN5 318 aa9.19□□□□□ -0.94
PTCH1-221ENST00000550914 RNF125Q96EQ8 232 aa9.19□□□□□ -0.94
PTCH1-221ENST00000550914 NACAE9PAV3 2078 aa9.19□□□□□ -0.94
PTCH1-221ENST00000550914 DNAH11Q96DT5 4516 aa9.18□□□□□ -0.94
PTCH1-221ENST00000550914 IFNA10P01566 189 aa9.18□□□□□ -0.94
PTCH1-221ENST00000550914 IFNA21P01568 189 aa9.18□□□□□ -0.94
PTCH1-221ENST00000550914 PSMB3P49720 205 aa9.18□□□□□ -0.94
PTCH1-221ENST00000550914 KLF9Q13886 244 aaPredicted RBP9.18□□□□□ -0.94
PTCH1-221ENST00000550914 OXA1LQ15070 435 aa9.18□□□□□ -0.94
PTCH1-221ENST00000550914 SMIM4Q8WVI0 70 aa9.18□□□□□ -0.94
PTCH1-221ENST00000550914 PRRT1Q99946 306 aa9.18□□□□□ -0.94
PTCH1-221ENST00000550914 SAV1Q9H4B6 383 aaPredicted RBP9.18□□□□□ -0.94
PTCH1-221ENST00000550914 RABL2AQ9UBK7 228 aaPredicted RBP9.18□□□□□ -0.94
PTCH1-221ENST00000550914 DKK2Q9UBU2 259 aa9.18□□□□□ -0.94
PTCH1-221ENST00000550914 HSPB7Q9UBY9 170 aa9.18□□□□□ -0.94
PTCH1-221ENST00000550914 RABL2BQ9UNT1 228 aa9.18□□□□□ -0.94
PTCH1-221ENST00000550914 KCNIP3Q9Y2W7 256 aa9.18□□□□□ -0.94
PTCH1-221ENST00000550914 RFNGQ9Y644 331 aa9.18□□□□□ -0.94
PTCH1-221ENST00000550914 FABP1P07148 127 aa9.17□□□□□ -0.94
PTCH1-221ENST00000550914 AKAIN1P0CW23 69 aa9.17□□□□□ -0.94
PTCH1-221ENST00000550914 GPX4P36969 197 aaPredicted RBP9.17□□□□□ -0.94
PTCH1-221ENST00000550914 CCR6P51684 374 aa9.17□□□□□ -0.94
PTCH1-221ENST00000550914 SUPT4H1P63272 117 aaKnown RBP9.17□□□□□ -0.94
PTCH1-221ENST00000550914 RNF212Q495C1 297 aa9.17□□□□□ -0.94
PTCH1-221ENST00000550914 GDF5OSQ5U4N7 250 aa9.17□□□□□ -0.94
PTCH1-221ENST00000550914 SAMD13Q5VXD3 122 aa9.17□□□□□ -0.94
PTCH1-221ENST00000550914 FAAP20Q6NZ36 180 aa9.17□□□□□ -0.94
PTCH1-221ENST00000550914 Q6ZR54 194 aa9.17□□□□□ -0.94
PTCH1-221ENST00000550914 LGI3Q8N145 548 aa9.17□□□□□ -0.94
PTCH1-221ENST00000550914 ZNF709Q8N972 641 aa9.17□□□□□ -0.94
PTCH1-221ENST00000550914 DTD1Q8TEA8 209 aa9.17□□□□□ -0.94
PTCH1-221ENST00000550914 SCRT1Q9BWW7 348 aa9.17□□□□□ -0.94
PTCH1-221ENST00000550914 NAA50Q9GZZ1 169 aaKnown RBP9.17□□□□□ -0.94
PTCH1-221ENST00000550914 MIXL1Q9H2W2 232 aa9.17□□□□□ -0.94
PTCH1-221ENST00000550914 A0A0B4J2A0 478 aa9.16□□□□□ -0.94
PTCH1-221ENST00000550914 M0R2N4 97 aa9.16□□□□□ -0.94
PTCH1-221ENST00000550914 ISLRO14498 428 aa9.16□□□□□ -0.94
PTCH1-221ENST00000550914 SOCS3O14543 225 aa9.16□□□□□ -0.94
PTCH1-221ENST00000550914 CTDSPLO15194 276 aa9.16□□□□□ -0.94
PTCH1-221ENST00000550914 PAX9P55771 341 aa9.16□□□□□ -0.94
PTCH1-221ENST00000550914 SMCO1Q147U7 214 aa9.16□□□□□ -0.94
PTCH1-221ENST00000550914 ZNF79Q15937 498 aa9.16□□□□□ -0.94
PTCH1-221ENST00000550914 OR4C16Q8NGL9 310 aa9.16□□□□□ -0.94
PTCH1-221ENST00000550914 SCGB3A2Q96PL1 93 aa9.16□□□□□ -0.94
PTCH1-221ENST00000550914 NIPSNAP3BQ9BS92 247 aa9.16□□□□□ -0.94
PTCH1-221ENST00000550914 PBDC1Q9BVG4 233 aa9.16□□□□□ -0.94
PTCH1-221ENST00000550914 WDR12Q9GZL7 423 aaKnown RBP9.16□□□□□ -0.94
PTCH1-221ENST00000550914 SHPKQ9UHJ6 478 aa9.16□□□□□ -0.94
PTCH1-221ENST00000550914 DYNC1H1Q14204 4646 aaKnown RBP9.16□□□□□ -0.94
PTCH1-221ENST00000550914 PIGBOS1A0A0B4J2F0 54 aa9.15□□□□□ -0.94
PTCH1-221ENST00000550914 ZFP92A6NM28 416 aa9.15□□□□□ -0.94
PTCH1-221ENST00000550914 RGS5O15539 181 aa9.15□□□□□ -0.94
PTCH1-221ENST00000550914 EMP1P54849 157 aa9.15□□□□□ -0.94
PTCH1-221ENST00000550914 SRPXP78539 464 aa9.15□□□□□ -0.94
PTCH1-221ENST00000550914 PSG9Q00887 426 aa9.15□□□□□ -0.94
PTCH1-221ENST00000550914 GAMTQ14353 236 aa9.15□□□□□ -0.94
PTCH1-221ENST00000550914 SOHLH1Q5JUK2 328 aa9.15□□□□□ -0.94
PTCH1-221ENST00000550914 FAM222AQ5U5X8 452 aa9.15□□□□□ -0.94
PTCH1-221ENST00000550914 UBE2DNLQ8IWF7 75 aa9.15□□□□□ -0.94
PTCH1-221ENST00000550914 COQ8AQ8NI60 647 aa9.15□□□□□ -0.94
PTCH1-221ENST00000550914 SLC35E1Q96K37 410 aa9.15□□□□□ -0.94
PTCH1-221ENST00000550914 LINC00052Q96N35 136 aa9.15□□□□□ -0.94
PTCH1-221ENST00000550914 RBKSQ9H477 322 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms