RNA–Protein interactions for RNA: ENST00000550889.5

ATXN2-222, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-222	ENST00000550889	OR8U8	P0C7N1	319 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	APELA	P0DMC3	54 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	OR13C7	P0DN81	318 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	DEFA4	P12838	97 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	MYOD1	P15172	320 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	ZP3	P21754	424 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	RAB25	P57735	213 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	NUTF2	P61970	127 aa	Known RBP	3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	ERH	P84090	104 aa	Known RBP	3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	RHOG	P84095	191 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	CD300C	Q08708	224 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	PPP1R1A	Q13522	171 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	GUK1	Q16774	197 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	C15orf32	Q32M92	178 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	CST9LP1	Q5W188	147 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	TMED4	Q7Z7H5	227 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	SLC35G3	Q8N808	338 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	STXBP6	Q8NFX7	210 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	OR10W1	Q8NGF6	305 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	OR1N2	Q8NGR9	330 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	OR1P1	Q8NH06	330 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	RNASE8	Q8TDE3	154 aa	Known RBP	3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	CASTOR1	Q8WTX7	329 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	CXorf58	Q96LI9	332 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	FAM110A	Q9BQ89	295 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	MCRIP2	Q9BUT9	160 aa	Known RBP	3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	HIPK2	Q9H2X6	1198 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	TBC1D24	Q9ULP9	559 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	TMED3	Q9Y3Q3	217 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	F11R	Q9Y624	299 aa	Known RBP	3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	TNC	P24821	2201 aa		3.59	□□□□□ -1.83
ATXN2-222	ENST00000550889	PLXNB1	O43157	2135 aa		3.59	□□□□□ -1.84
ATXN2-222	ENST00000550889	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	TRBV7-1	A0A0A6YYK4	115 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889		A0A0G2JRQ6	117 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889		A0A1B0GU03	582 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	LINC01619	G3V211	115 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	SMLR1	H3BR10	107 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	ST8SIA3	O43173	380 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	PITX3	O75364	302 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	DFFB	O76075	338 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	IFNA17	P01571	189 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	HLA-A	P01891	365 aa	Known RBP	3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	PRH1	P02810	166 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	TCRB	P04435	133 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	NBEAP1	P0C6P0	100 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	SULT1A3	P0DMM9	295 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	SULT1A4	P0DMN0	295 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	RAB11A	P62491	216 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	ATP5G2	Q06055	141 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	DHRS2	Q13268	280 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	IZUMO4	Q1ZYL8	232 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	DEFB136	Q30KP8	78 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	KPRP	Q5T749	579 aa	Predicted RBP	3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	PVRIG	Q6DKI7	326 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	LYZL2	Q7Z4W2	148 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	DUSP18	Q8NEJ0	188 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	STOML3	Q8TAV4	291 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	VN1R17P	Q8TDU5	208 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	GPR146	Q96CH1	333 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	C14orf144	Q96I85	54 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	PDCD10	Q9BUL8	212 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	C20orf85	Q9H1P6	137 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	GEMIN7	Q9H840	131 aa	Known RBP	3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	PLEKHA3	Q9HB20	300 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	GPN1	Q9HCN4	374 aa	Predicted RBP	3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	NIT2	Q9NQR4	276 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	CACNG5	Q9UF02	275 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	TET2	Q6N021	2002 aa	Predicted RBP	3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	FAM240B	A0A1B0GVZ2	78 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889		A0A1B0GW15	77 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	FBLL1	A6NHQ2	334 aa	Known RBP	3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	FAM90A26	D6RGX4	464 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	CORT	O00230	105 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	OR2J3	O76001	311 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	NDUFB8	O95169	186 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	IGHV3-11	P01762	117 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	REG1A	P05451	166 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	HOXD3	P31249	432 aa	Predicted RBP	3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	FCGR2B	P31994	310 aa	Predicted RBP	3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	SNCA	P37840	140 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	INSL3	P51460	131 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	SUB1	P53999	127 aa	Known RBP eCLIP	3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	IFITM3	Q01628	133 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	KLF5	Q13887	457 aa	Predicted RBP	3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	OXA1L	Q15070	435 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	TATDN3	Q17R31	274 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	BSX	Q3C1V8	233 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	ANKRD55	Q3KP44	614 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	RNF212	Q495C1	297 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	RBPMS2	Q6ZRY4	209 aa	Known RBP	3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	LYG2	Q86SG7	212 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	COQ8A	Q8NI60	647 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	EEF1AKMT3	Q96AZ1	226 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	OR5B12	Q96R08	314 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	ASCL2	Q99929	193 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	CSTL1	Q9H114	145 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	GAR1	Q9NY12	217 aa	Known RBP	3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	HSPB7	Q9UBY9	170 aa		3.58	□□□□□ -1.84
ATXN2-222	ENST00000550889	FLVCR2	Q9UPI3	526 aa		3.58	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms