RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 GGNBP1Q5YKI7 109 aa10.8□□□□□ -0.68
LINC00661-203ENST00000549131 C16orf54Q6UWD8 224 aa10.8□□□□□ -0.68
LINC00661-203ENST00000549131 STHQ8IWL8 128 aa10.8□□□□□ -0.68
LINC00661-203ENST00000549131 OR51G1Q8NGK1 321 aa10.8□□□□□ -0.68
LINC00661-203ENST00000549131 GLMPQ8WWB7 406 aa10.8□□□□□ -0.68
LINC00661-203ENST00000549131 CIB3Q96Q77 187 aaPredicted RBP10.8□□□□□ -0.68
LINC00661-203ENST00000549131 U3KQE9 123 aa10.8□□□□□ -0.68
LINC00661-203ENST00000549131 C9orf170A2RU37 121 aa10.79□□□□□ -0.68
LINC00661-203ENST00000549131 CENPXA8MT69 81 aa10.79□□□□□ -0.68
LINC00661-203ENST00000549131 WRBO00258 174 aa10.79□□□□□ -0.68
LINC00661-203ENST00000549131 SYNGR2O43760 224 aa10.79□□□□□ -0.68
LINC00661-203ENST00000549131 GPX4P36969 197 aaPredicted RBP10.79□□□□□ -0.68
LINC00661-203ENST00000549131 TMEM217Q8N7C4 229 aa10.79□□□□□ -0.68
LINC00661-203ENST00000549131 DCANP1Q8TF63 244 aa10.79□□□□□ -0.68
LINC00661-203ENST00000549131 GATAD1Q8WUU5 269 aa10.79□□□□□ -0.68
LINC00661-203ENST00000549131 SDHCQ99643 169 aaPredicted RBP10.79□□□□□ -0.68
LINC00661-203ENST00000549131 FLVCR2Q9UPI3 526 aa10.79□□□□□ -0.68
LINC00661-203ENST00000549131 ALMS1Q8TCU4 4167 aa10.78□□□□□ -0.68
LINC00661-203ENST00000549131 H3BP45 60 aa10.78□□□□□ -0.68
LINC00661-203ENST00000549131 ADAP1O75689 374 aa10.78□□□□□ -0.68
LINC00661-203ENST00000549131 FABP1P07148 127 aa10.78□□□□□ -0.68
LINC00661-203ENST00000549131 IL7P13232 177 aa10.78□□□□□ -0.68
LINC00661-203ENST00000549131 NUP62P37198 522 aaPredicted RBP10.78□□□□□ -0.68
LINC00661-203ENST00000549131 AP2S1P53680 142 aaPredicted RBP10.78□□□□□ -0.68
LINC00661-203ENST00000549131 LYZP61626 148 aa10.78□□□□□ -0.68
LINC00661-203ENST00000549131 RPP30P78346 268 aaKnown RBP10.78□□□□□ -0.68
LINC00661-203ENST00000549131 ZNF90Q03938 601 aa10.78□□□□□ -0.68
LINC00661-203ENST00000549131 C4orf46Q504U0 113 aa10.78□□□□□ -0.68
LINC00661-203ENST00000549131 PSMG4Q5JS54 123 aa10.78□□□□□ -0.68
LINC00661-203ENST00000549131 SIGLEC15Q6ZMC9 328 aa10.78□□□□□ -0.68
LINC00661-203ENST00000549131 COQ8AQ8NI60 647 aa10.78□□□□□ -0.68
LINC00661-203ENST00000549131 RARRES2Q99969 163 aa10.78□□□□□ -0.68
LINC00661-203ENST00000549131 IGKV1D-37A0A075B6S9 117 aa10.77□□□□□ -0.69
LINC00661-203ENST00000549131 KNCNA6PVL3 124 aa10.77□□□□□ -0.69
LINC00661-203ENST00000549131 BUB3O43684 328 aa10.77□□□□□ -0.69
LINC00661-203ENST00000549131 OR4E1P0C645 316 aa10.77□□□□□ -0.69
LINC00661-203ENST00000549131 ANXA7P20073 488 aaKnown RBP10.77□□□□□ -0.69
LINC00661-203ENST00000549131 BTCP35070 178 aa10.77□□□□□ -0.69
LINC00661-203ENST00000549131 OR2F1Q13607 317 aa10.77□□□□□ -0.69
LINC00661-203ENST00000549131 ACTL10Q5JWF8 245 aa10.77□□□□□ -0.69
LINC00661-203ENST00000549131 TRPT1Q86TN4 253 aaKnown RBP10.77□□□□□ -0.69
LINC00661-203ENST00000549131 OR11H2Q8NH07 326 aa10.77□□□□□ -0.69
LINC00661-203ENST00000549131 C7orf50Q9BRJ6 194 aaKnown RBP10.77□□□□□ -0.69
LINC00661-203ENST00000549131 NRN1Q9NPD7 142 aa10.77□□□□□ -0.69
LINC00661-203ENST00000549131 NUPR2A6NF83 97 aa10.76□□□□□ -0.69
LINC00661-203ENST00000549131 IFNA21P01568 189 aa10.76□□□□□ -0.69
LINC00661-203ENST00000549131 SNRPD3P62318 126 aaKnown RBP10.76□□□□□ -0.69
LINC00661-203ENST00000549131 AKR1C1Q04828 323 aa10.76□□□□□ -0.69
LINC00661-203ENST00000549131 SPANXN5Q5MJ07 72 aa10.76□□□□□ -0.69
LINC00661-203ENST00000549131 OR8G2PQ6IF36 304 aa10.76□□□□□ -0.69
LINC00661-203ENST00000549131 PPP1R14BQ96C90 147 aa10.76□□□□□ -0.69
LINC00661-203ENST00000549131 NDUFA13Q9P0J0 144 aa10.76□□□□□ -0.69
LINC00661-203ENST00000549131 PFDN2Q9UHV9 154 aa10.76□□□□□ -0.69
LINC00661-203ENST00000549131 PLECQ15149 4684 aaKnown RBP10.76□□□□□ -0.69
LINC00661-203ENST00000549131 HYDINQ4G0P3 5121 aa10.76□□□□□ -0.69
LINC00661-203ENST00000549131 SSSCA1O60232 199 aa10.75□□□□□ -0.69
LINC00661-203ENST00000549131 SPP1P10451 314 aa10.75□□□□□ -0.69
LINC00661-203ENST00000549131 ACOT7LQ6ZUV0 252 aa10.75□□□□□ -0.69
LINC00661-203ENST00000549131 TRGV9Q99603 122 aa10.75□□□□□ -0.69
LINC00661-203ENST00000549131 C20orf85Q9H1P6 137 aa10.75□□□□□ -0.69
LINC00661-203ENST00000549131 STRAPQ9Y3F4 350 aaKnown RBP10.75□□□□□ -0.69
LINC00661-203ENST00000549131 DNAH1Q9P2D7 4330 aa10.75□□□□□ -0.69
LINC00661-203ENST00000549131 IGKV1OR2-108A0A075B7D4 117 aa10.74□□□□□ -0.69
LINC00661-203ENST00000549131 PRSS46E5RG02 174 aa10.74□□□□□ -0.69
LINC00661-203ENST00000549131 SCGB1D2O95969 90 aa10.74□□□□□ -0.69
LINC00661-203ENST00000549131 ATF4P18848 351 aaPredicted RBP10.74□□□□□ -0.69
LINC00661-203ENST00000549131 C4BPBP20851 252 aa10.74□□□□□ -0.69
LINC00661-203ENST00000549131 NKX2-1P43699 371 aaPredicted RBP10.74□□□□□ -0.69
LINC00661-203ENST00000549131 POLR2GP62487 172 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINC00661-203ENST00000549131 MORN3Q6PF18 240 aaPredicted RBP10.74□□□□□ -0.69
LINC00661-203ENST00000549131 THAP8Q8NA92 274 aa10.74□□□□□ -0.69
LINC00661-203ENST00000549131 C11orf68Q9H3H3 251 aaKnown RBP10.74□□□□□ -0.69
LINC00661-203ENST00000549131 FBXL17Q9UF56 701 aa10.74□□□□□ -0.69
LINC00661-203ENST00000549131 SMCO3A2RU48 225 aa10.73□□□□□ -0.69
LINC00661-203ENST00000549131 SNRPGP15A8MWD9 76 aa10.73□□□□□ -0.69
LINC00661-203ENST00000549131 DEFB4AO15263 64 aa10.73□□□□□ -0.69
LINC00661-203ENST00000549131 LYRM1O43325 122 aa10.73□□□□□ -0.69
LINC00661-203ENST00000549131 TMEM41BQ5BJD5 291 aa10.73□□□□□ -0.69
LINC00661-203ENST00000549131 OR4D5Q8NGN0 318 aa10.73□□□□□ -0.69
LINC00661-203ENST00000549131 ID3Q02535 119 aa10.72□□□□□ -0.69
LINC00661-203ENST00000549131 IAH1Q2TAA2 248 aaPredicted RBP10.72□□□□□ -0.69
LINC00661-203ENST00000549131 BPIFCQ8NFQ6 507 aa10.72□□□□□ -0.69
LINC00661-203ENST00000549131 RAB40CQ96S21 281 aa10.72□□□□□ -0.69
LINC00661-203ENST00000549131 CLEC5AQ9NY25 188 aa10.72□□□□□ -0.69
LINC00661-203ENST00000549131 PSENENQ9NZ42 101 aa10.72□□□□□ -0.69
LINC00661-203ENST00000549131 PLA2G10O15496 165 aa10.71□□□□□ -0.69
LINC00661-203ENST00000549131 GIG44P09565 113 aaPredicted RBP10.71□□□□□ -0.69
LINC00661-203ENST00000549131 CNPY1Q3B7I2 92 aa10.71□□□□□ -0.69
LINC00661-203ENST00000549131 C1orf194Q5T5A4 169 aa10.71□□□□□ -0.69
LINC00661-203ENST00000549131 CEMP1Q6PRD7 247 aaPredicted RBP10.71□□□□□ -0.69
LINC00661-203ENST00000549131 OR8I2Q8N0Y5 310 aa10.71□□□□□ -0.69
LINC00661-203ENST00000549131 C11orf45Q8TAV5 145 aa10.71□□□□□ -0.69
LINC00661-203ENST00000549131 WDR12Q9GZL7 423 aaKnown RBP10.71□□□□□ -0.69
LINC00661-203ENST00000549131 SLC25A22Q9H936 323 aa10.71□□□□□ -0.69
LINC00661-203ENST00000549131 SEPSECSQ9HD40 501 aaKnown RBP10.71□□□□□ -0.69
LINC00661-203ENST00000549131 KLK5Q9Y337 293 aaPredicted RBP10.71□□□□□ -0.69
LINC00661-203ENST00000549131 TRAV6A0A075B6T7 132 aa10.7□□□□□ -0.7
LINC00661-203ENST00000549131 CFDP00746 253 aaPredicted RBP10.7□□□□□ -0.7
LINC00661-203ENST00000549131 GATA2P23769 480 aaPredicted RBP10.7□□□□□ -0.7
LINC00661-203ENST00000549131 ID1P41134 155 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms