RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 RPL12P30050 165 aaKnown RBP9.92□□□□□ -0.82
CDX2-202ENST00000548877 ADMP35318 185 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 HTR2BP41595 481 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 VAMP2P63027 116 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 ID3Q02535 119 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 SPAG16Q8N0X2 631 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 STOML3Q8TAV4 291 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 LRRC20Q8TCA0 184 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 TMEM190Q8WZ59 177 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 RAB40CQ96S21 281 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 RARRES2Q99969 163 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 AIFM2Q9BRQ8 373 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 CSTL1Q9H114 145 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 OR4C46A6NHA9 309 aa9.91□□□□□ -0.82
CDX2-202ENST00000548877 CGB1A6NKQ9 187 aa9.91□□□□□ -0.82
CDX2-202ENST00000548877 S100A1P23297 94 aa9.91□□□□□ -0.82
CDX2-202ENST00000548877 LPAR6P43657 344 aa9.91□□□□□ -0.82
CDX2-202ENST00000548877 ERVK-16P61578 105 aa9.91□□□□□ -0.82
CDX2-202ENST00000548877 RPL30P62888 115 aaKnown RBP9.91□□□□□ -0.82
CDX2-202ENST00000548877 CLLU1Q5K131 121 aa9.91□□□□□ -0.82
CDX2-202ENST00000548877 ST8SIA2Q92186 375 aa9.91□□□□□ -0.82
CDX2-202ENST00000548877 HRH4Q9H3N8 390 aa9.91□□□□□ -0.82
CDX2-202ENST00000548877 FBXL17Q9UF56 701 aa9.91□□□□□ -0.82
CDX2-202ENST00000548877 BORCS7-ASMTA0A0B4J1R7 106 aa9.9□□□□□ -0.82
CDX2-202ENST00000548877 C11orf94C9JXX5 98 aa9.9□□□□□ -0.82
CDX2-202ENST00000548877 K7EMT4 169 aa9.9□□□□□ -0.82
CDX2-202ENST00000548877 PITX3O75364 302 aa9.9□□□□□ -0.82
CDX2-202ENST00000548877 HPRT1P00492 218 aa9.9□□□□□ -0.82
CDX2-202ENST00000548877 MFAP2P55001 183 aa9.9□□□□□ -0.82
CDX2-202ENST00000548877 CMC4P56277 68 aaPredicted RBP9.9□□□□□ -0.82
CDX2-202ENST00000548877 TAS2R30P59541 319 aa9.9□□□□□ -0.82
CDX2-202ENST00000548877 BAXQ07812 192 aa9.9□□□□□ -0.82
CDX2-202ENST00000548877 H2BFWTQ7Z2G1 175 aa9.9□□□□□ -0.82
CDX2-202ENST00000548877 VKORC1L1Q8N0U8 176 aa9.9□□□□□ -0.82
CDX2-202ENST00000548877 OR11H2Q8NH07 326 aa9.9□□□□□ -0.82
CDX2-202ENST00000548877 OR4S2Q8NH73 311 aa9.9□□□□□ -0.82
CDX2-202ENST00000548877 GPR146Q96CH1 333 aa9.9□□□□□ -0.82
CDX2-202ENST00000548877 GPHA2Q96T91 129 aa9.9□□□□□ -0.82
CDX2-202ENST00000548877 ATP6V0BQ99437 205 aa9.9□□□□□ -0.82
CDX2-202ENST00000548877 DAZ1Q9NQZ3 744 aaKnown RBP9.9□□□□□ -0.82
CDX2-202ENST00000548877 RCL1Q9Y2P8 373 aaKnown RBP9.9□□□□□ -0.82
CDX2-202ENST00000548877 TGOLN2O43493 480 aa9.89□□□□□ -0.83
CDX2-202ENST00000548877 GPR183P32249 361 aa9.89□□□□□ -0.83
CDX2-202ENST00000548877 BRWD1-AS2P59051 145 aa9.89□□□□□ -0.83
CDX2-202ENST00000548877 BAP18Q8IXM2 172 aa9.89□□□□□ -0.83
CDX2-202ENST00000548877 VN1R17PQ8TDU5 208 aa9.89□□□□□ -0.83
CDX2-202ENST00000548877 SRSF8Q9BRL6 282 aaKnown RBP9.89□□□□□ -0.83
CDX2-202ENST00000548877 SLC25A32Q9H2D1 315 aa9.89□□□□□ -0.83
CDX2-202ENST00000548877 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.89□□□□□ -0.83
CDX2-202ENST00000548877 CACNG5Q9UF02 275 aa9.89□□□□□ -0.83
CDX2-202ENST00000548877 IGKV1-39P01597 117 aa9.88□□□□□ -0.83
CDX2-202ENST00000548877 IGKV1-5P01602 117 aa9.88□□□□□ -0.83
CDX2-202ENST00000548877 IGKV1D-39P04432 117 aa9.88□□□□□ -0.83
CDX2-202ENST00000548877 DEFA4P12838 97 aa9.88□□□□□ -0.83
CDX2-202ENST00000548877 RPL8P62917 257 aaKnown RBP9.88□□□□□ -0.83
CDX2-202ENST00000548877 STX12Q86Y82 276 aa9.88□□□□□ -0.83
CDX2-202ENST00000548877 OR5B3Q8NH48 314 aa9.88□□□□□ -0.83
CDX2-202ENST00000548877 OR4A5Q8NH83 315 aa9.88□□□□□ -0.83
CDX2-202ENST00000548877 CIB3Q96Q77 187 aaPredicted RBP9.88□□□□□ -0.83
CDX2-202ENST00000548877 KRTAP4-5Q9BYR2 181 aa9.88□□□□□ -0.83
CDX2-202ENST00000548877 LYRM2Q9NU23 88 aaPredicted RBP9.88□□□□□ -0.83
CDX2-202ENST00000548877 BET1LQ9NYM9 111 aa9.88□□□□□ -0.83
CDX2-202ENST00000548877 THYN1Q9P016 225 aa9.88□□□□□ -0.83
CDX2-202ENST00000548877 HSPG2P98160 4391 aa9.88□□□□□ -0.83
CDX2-202ENST00000548877 IGHV3-35A0A0C4DH35 117 aa9.87□□□□□ -0.83
CDX2-202ENST00000548877 IGLC7A0M8Q6 106 aa9.87□□□□□ -0.83
CDX2-202ENST00000548877 LINC00862A6NCI5 91 aa9.87□□□□□ -0.83
CDX2-202ENST00000548877 IGLL5B9A064 214 aa9.87□□□□□ -0.83
CDX2-202ENST00000548877 NDUFA4O00483 81 aa9.87□□□□□ -0.83
CDX2-202ENST00000548877 SYNGR2O43760 224 aa9.87□□□□□ -0.83
CDX2-202ENST00000548877 SSSCA1O60232 199 aa9.87□□□□□ -0.83
CDX2-202ENST00000548877 CFDP00746 253 aaPredicted RBP9.87□□□□□ -0.83
CDX2-202ENST00000548877 HRASP01112 189 aa9.87□□□□□ -0.83
CDX2-202ENST00000548877 FGF2P09038 288 aa9.87□□□□□ -0.83
CDX2-202ENST00000548877 P0C879 139 aa9.87□□□□□ -0.83
CDX2-202ENST00000548877 NQO2P16083 231 aa9.87□□□□□ -0.83
CDX2-202ENST00000548877 CAV2P51636 162 aa9.87□□□□□ -0.83
CDX2-202ENST00000548877 POLR2GP62487 172 aaKnown RBP eCLIP9.87□□□□□ -0.83
CDX2-202ENST00000548877 ZNF266Q14584 549 aa9.87□□□□□ -0.83
CDX2-202ENST00000548877 SPSB3Q6PJ21 355 aa9.87□□□□□ -0.83
CDX2-202ENST00000548877 APRG1Q8IVJ8 170 aa9.87□□□□□ -0.83
CDX2-202ENST00000548877 DMBX1Q8NFW5 382 aa9.87□□□□□ -0.83
CDX2-202ENST00000548877 MARCH11A6NNE9 402 aa9.86□□□□□ -0.83
CDX2-202ENST00000548877 RTL8CO15255 209 aa9.86□□□□□ -0.83
CDX2-202ENST00000548877 DFFBO76075 338 aa9.86□□□□□ -0.83
CDX2-202ENST00000548877 KRASP01116 189 aa9.86□□□□□ -0.83
CDX2-202ENST00000548877 REG1AP05451 166 aa9.86□□□□□ -0.83
CDX2-202ENST00000548877 OR2B8PP59922 312 aa9.86□□□□□ -0.83
CDX2-202ENST00000548877 OR2B11Q5JQS5 317 aa9.86□□□□□ -0.83
CDX2-202ENST00000548877 ALKAL2Q6UX46 152 aa9.86□□□□□ -0.83
CDX2-202ENST00000548877 SSX9Q7RTT3 188 aa9.86□□□□□ -0.83
CDX2-202ENST00000548877 UBAC2Q8NBM4 344 aa9.86□□□□□ -0.83
CDX2-202ENST00000548877 BSCL2Q96G97 398 aaPredicted RBP9.86□□□□□ -0.83
CDX2-202ENST00000548877 SMIM8Q96KF7 97 aa9.86□□□□□ -0.83
CDX2-202ENST00000548877 C11orf1Q9H5F2 150 aa9.86□□□□□ -0.83
CDX2-202ENST00000548877 MED9Q9NWA0 146 aa9.86□□□□□ -0.83
CDX2-202ENST00000548877 HSPB7Q9UBY9 170 aa9.86□□□□□ -0.83
CDX2-202ENST00000548877 A0A0G2JRQ6 117 aa9.85□□□□□ -0.83
CDX2-202ENST00000548877 PRSS29PA6NIE9 313 aa9.85□□□□□ -0.83
CDX2-202ENST00000548877 C15orf62A8K5M9 175 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 196.1 ms