RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 ELOVL1Q9BW60 279 aa16.47■□□□□ 0.23
RITA1-201ENST00000548278 RD3LP0DJH9 198 aa16.46■□□□□ 0.23
RITA1-201ENST00000548278 ZMAT5Q9UDW3 170 aaKnown RBP16.46■□□□□ 0.23
RITA1-201ENST00000548278 HIGD1AQ9Y241 93 aa16.46■□□□□ 0.23
RITA1-201ENST00000548278 GALR1P47211 349 aa16.46■□□□□ 0.22
RITA1-201ENST00000548278 LYZP61626 148 aa16.46■□□□□ 0.22
RITA1-201ENST00000548278 BRD3OSQ6XYD6 125 aa16.46■□□□□ 0.22
RITA1-201ENST00000548278 LINC00518Q8N0U6 118 aa16.46■□□□□ 0.22
RITA1-201ENST00000548278 SAV1Q9H4B6 383 aaPredicted RBP16.46■□□□□ 0.22
RITA1-201ENST00000548278 BIN3Q9NQY0 253 aa16.46■□□□□ 0.22
RITA1-201ENST00000548278 FABP1P07148 127 aa16.45■□□□□ 0.22
RITA1-201ENST00000548278 NECAP1Q8NC96 275 aa16.45■□□□□ 0.22
RITA1-201ENST00000548278 SGMS2Q8NHU3 365 aa16.45■□□□□ 0.22
RITA1-201ENST00000548278 ZNF48Q96MX3 618 aaPredicted RBP16.45■□□□□ 0.22
RITA1-201ENST00000548278 LY96Q9Y6Y9 160 aa16.45■□□□□ 0.22
RITA1-201ENST00000548278 S4R3C0 116 aa16.45■□□□□ 0.22
RITA1-201ENST00000548278 HELTA6NFD8 242 aa16.44■□□□□ 0.22
RITA1-201ENST00000548278 IGHV4-38-2P0DP08 117 aa16.44■□□□□ 0.22
RITA1-201ENST00000548278 OR5B12Q96R08 314 aa16.44■□□□□ 0.22
RITA1-201ENST00000548278 PYGO2Q9BRQ0 406 aa16.44■□□□□ 0.22
RITA1-201ENST00000548278 MRPL27Q9P0M9 148 aaKnown RBP16.44■□□□□ 0.22
RITA1-201ENST00000548278 F8W735 103 aaPredicted RBP16.44■□□□□ 0.22
RITA1-201ENST00000548278 MFAP4P55083 255 aa16.44■□□□□ 0.22
RITA1-201ENST00000548278 CLEC12BQ2HXU8 276 aa16.44■□□□□ 0.22
RITA1-201ENST00000548278 PIFOQ8TCI5 191 aa16.44■□□□□ 0.22
RITA1-201ENST00000548278 SFRP2Q96HF1 295 aa16.44■□□□□ 0.22
RITA1-201ENST00000548278 MEGF9Q9H1U4 602 aa16.44■□□□□ 0.22
RITA1-201ENST00000548278 A0A0U1RQK1 487 aa16.43■□□□□ 0.22
RITA1-201ENST00000548278 K7EN84 100 aa16.43■□□□□ 0.22
RITA1-201ENST00000548278 NDUFB8O95169 186 aa16.43■□□□□ 0.22
RITA1-201ENST00000548278 TOMM40O96008 361 aa16.43■□□□□ 0.22
RITA1-201ENST00000548278 GP9P14770 177 aa16.43■□□□□ 0.22
RITA1-201ENST00000548278 HNF1AP20823 631 aa16.43■□□□□ 0.22
RITA1-201ENST00000548278 LEMD1Q68G75 181 aa16.43■□□□□ 0.22
RITA1-201ENST00000548278 ZNF329Q86UD4 541 aa16.43■□□□□ 0.22
RITA1-201ENST00000548278 C5orf56Q8N8D9 126 aa16.43■□□□□ 0.22
RITA1-201ENST00000548278 SLC25A39Q9BZJ4 359 aaPredicted RBP16.43■□□□□ 0.22
RITA1-201ENST00000548278 C7orf69Q9H7B7 122 aa16.43■□□□□ 0.22
RITA1-201ENST00000548278 THYN1Q9P016 225 aa16.43■□□□□ 0.22
RITA1-201ENST00000548278 TRAV30A0A087WSZ9 112 aa16.42■□□□□ 0.22
RITA1-201ENST00000548278 B4DSR2 109 aa16.42■□□□□ 0.22
RITA1-201ENST00000548278 ATP6V0E1O15342 81 aa16.42■□□□□ 0.22
RITA1-201ENST00000548278 SLC25A16P16260 332 aa16.42■□□□□ 0.22
RITA1-201ENST00000548278 MYCNOSP40205 109 aa16.42■□□□□ 0.22
RITA1-201ENST00000548278 FBN2P35556 2912 aa16.42■□□□□ 0.22
RITA1-201ENST00000548278 PPP1R2P9O14990 202 aa16.42■□□□□ 0.22
RITA1-201ENST00000548278 GNG7O60262 68 aa16.42■□□□□ 0.22
RITA1-201ENST00000548278 OR2J3O76001 311 aa16.42■□□□□ 0.22
RITA1-201ENST00000548278 SNRPCP09234 159 aaKnown RBP16.42■□□□□ 0.22
RITA1-201ENST00000548278 S100PP25815 95 aa16.42■□□□□ 0.22
RITA1-201ENST00000548278 CENPWQ5EE01 88 aa16.42■□□□□ 0.22
RITA1-201ENST00000548278 TEX38Q6PEX7 206 aa16.42■□□□□ 0.22
RITA1-201ENST00000548278 FAM110DQ8TAY7 271 aaPredicted RBP16.42■□□□□ 0.22
RITA1-201ENST00000548278 C21orf62Q9NYP8 219 aa16.42■□□□□ 0.22
RITA1-201ENST00000548278 CELSR2Q9HCU4 2923 aa16.41■□□□□ 0.22
RITA1-201ENST00000548278 MDFIC2A0A1B0GVS7 189 aa16.41■□□□□ 0.22
RITA1-201ENST00000548278 SRP14P37108 136 aaKnown RBP16.41■□□□□ 0.22
RITA1-201ENST00000548278 YPEL3P61236 119 aaPredicted RBP16.41■□□□□ 0.22
RITA1-201ENST00000548278 KLK9Q2XQG4 91 aa16.41■□□□□ 0.22
RITA1-201ENST00000548278 ZNF491Q8N8L2 437 aa16.41■□□□□ 0.22
RITA1-201ENST00000548278 HIF1ANQ9NWT6 349 aa16.41■□□□□ 0.22
RITA1-201ENST00000548278 KLK9Q9UKQ9 250 aa16.41■□□□□ 0.22
RITA1-201ENST00000548278 SH2D7A6NKC9 451 aaPredicted RBP16.41■□□□□ 0.22
RITA1-201ENST00000548278 NBEAP1P0C6P0 100 aa16.41■□□□□ 0.22
RITA1-201ENST00000548278 GNG4P50150 75 aa16.41■□□□□ 0.22
RITA1-201ENST00000548278 UNQ5815/PRO19632Q6UWF5 114 aa16.41■□□□□ 0.22
RITA1-201ENST00000548278 TMEM219Q86XT9 240 aa16.41■□□□□ 0.22
RITA1-201ENST00000548278 TMUB1Q9BVT8 246 aa16.41■□□□□ 0.22
RITA1-201ENST00000548278 A0A096LNT2 108 aa16.4■□□□□ 0.22
RITA1-201ENST00000548278 WI2-2373I1.2A0A1W2PRP0 233 aa16.4■□□□□ 0.22
RITA1-201ENST00000548278 LINC01548A6NM66 108 aa16.4■□□□□ 0.22
RITA1-201ENST00000548278 BLNKQ8WV28 456 aa16.4■□□□□ 0.22
RITA1-201ENST00000548278 TMEM14CQ9P0S9 112 aa16.4■□□□□ 0.22
RITA1-201ENST00000548278 MOB4Q9Y3A3 225 aa16.4■□□□□ 0.22
RITA1-201ENST00000548278 C5orf52A6NGY3 159 aa16.39■□□□□ 0.21
RITA1-201ENST00000548278 GGCTO75223 188 aaKnown RBP16.39■□□□□ 0.21
RITA1-201ENST00000548278 HIST1H1BP16401 226 aaKnown RBP16.39■□□□□ 0.21
RITA1-201ENST00000548278 SNRPEP62304 92 aaKnown RBP16.39■□□□□ 0.21
RITA1-201ENST00000548278 RANP62826 216 aaKnown RBP16.39■□□□□ 0.21
RITA1-201ENST00000548278 ECSCRQ19T08 205 aa16.39■□□□□ 0.21
RITA1-201ENST00000548278 Q56UQ5 140 aa16.39■□□□□ 0.21
RITA1-201ENST00000548278 RNF125Q96EQ8 232 aa16.39■□□□□ 0.21
RITA1-201ENST00000548278 IGF2BP2-AS1Q96M15 143 aa16.39■□□□□ 0.21
RITA1-201ENST00000548278 FBXL7Q9UJT9 491 aa16.39■□□□□ 0.21
RITA1-201ENST00000548278 SOX21Q9Y651 276 aaPredicted RBP16.39■□□□□ 0.21
RITA1-201ENST00000548278 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.39■□□□□ 0.21
RITA1-201ENST00000548278 ANKRD17O75179 2603 aaKnown RBP16.39■□□□□ 0.21
RITA1-201ENST00000548278 TRGC2P03986 189 aa16.39■□□□□ 0.21
RITA1-201ENST00000548278 ZNF600Q6ZNG1 722 aa16.39■□□□□ 0.21
RITA1-201ENST00000548278 LURAP1LQ8IV03 231 aa16.39■□□□□ 0.21
RITA1-201ENST00000548278 IMMP2LQ96T52 175 aa16.39■□□□□ 0.21
RITA1-201ENST00000548278 TCEAL7Q9BRU2 100 aa16.39■□□□□ 0.21
RITA1-201ENST00000548278 SHANK2-AS3Q9BTD1 123 aa16.39■□□□□ 0.21
RITA1-201ENST00000548278 TRAV20A0A0B4J274 112 aa16.38■□□□□ 0.21
RITA1-201ENST00000548278 TGOLN2O43493 480 aa16.38■□□□□ 0.21
RITA1-201ENST00000548278 AMY1AP04745 511 aa16.38■□□□□ 0.21
RITA1-201ENST00000548278 FCGR2BP31994 310 aaPredicted RBP16.38■□□□□ 0.21
RITA1-201ENST00000548278 OR10G8Q8NGN5 311 aa16.38■□□□□ 0.21
RITA1-201ENST00000548278 H3BRN7 92 aa16.38■□□□□ 0.21
RITA1-201ENST00000548278 PEX7O00628 323 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms