RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 C16orf54Q6UWD8 224 aa8.57□□□□□ -1.04
TRAFD1-205ENST00000548277 ZNF575Q86XF7 245 aa8.57□□□□□ -1.04
TRAFD1-205ENST00000548277 Q8WTZ3 238 aa8.57□□□□□ -1.04
TRAFD1-205ENST00000548277 PRR13Q9NZ81 148 aa8.57□□□□□ -1.04
TRAFD1-205ENST00000548277 RSL24D1Q9UHA3 163 aaKnown RBP8.57□□□□□ -1.04
TRAFD1-205ENST00000548277 SCP2D1Q9UJQ7 156 aa8.57□□□□□ -1.04
TRAFD1-205ENST00000548277 KCNIP3Q9Y2W7 256 aa8.57□□□□□ -1.04
TRAFD1-205ENST00000548277 TMEM56-RWDD3S4R434 201 aa8.57□□□□□ -1.04
TRAFD1-205ENST00000548277 DNAH2Q9P225 4427 aa8.57□□□□□ -1.04
TRAFD1-205ENST00000548277 TRAV30A0A087WSZ9 112 aa8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 RPS10-NUDT3A0A1W2PQS6 291 aa8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 FABP12A6NFH5 140 aa8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 H3BMQ9 156 aa8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 NOL3O60936 208 aaKnown RBP8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 SCGB2A1O75556 95 aa8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 NXPH3O95157 252 aa8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 AMBPP02760 352 aa8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 HNRNPCP07910 306 aaKnown RBP eCLIP8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 EIF2B2P49770 351 aaKnown RBP8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 RND2P52198 227 aa8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 NUTF2P61970 127 aaKnown RBP8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 C2orf83Q53S99 150 aa8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 GLMPQ8WWB7 406 aa8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 SCGB3A2Q96PL1 93 aa8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 SOSTQ9BQB4 213 aa8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 SLIRPQ9GZT3 109 aaKnown RBP8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 MCUBQ9NWR8 336 aa8.56□□□□□ -1.04
TRAFD1-205ENST00000548277 FAT2Q9NYQ8 4349 aa8.55□□□□□ -1.04
TRAFD1-205ENST00000548277 FAM90A26D6RGX4 464 aa8.55□□□□□ -1.04
TRAFD1-205ENST00000548277 SULT1A3P0DMM9 295 aa8.55□□□□□ -1.04
TRAFD1-205ENST00000548277 SULT1A4P0DMN0 295 aa8.55□□□□□ -1.04
TRAFD1-205ENST00000548277 AKR1C4P17516 323 aa8.55□□□□□ -1.04
TRAFD1-205ENST00000548277 SNRPD3P62318 126 aaKnown RBP8.55□□□□□ -1.04
TRAFD1-205ENST00000548277 USF2Q15853 346 aaPredicted RBP8.55□□□□□ -1.04
TRAFD1-205ENST00000548277 GDF5OSQ5U4N7 250 aa8.55□□□□□ -1.04
TRAFD1-205ENST00000548277 PRSS54Q6PEW0 395 aa8.55□□□□□ -1.04
TRAFD1-205ENST00000548277 SLC24A4Q8NFF2 622 aa8.55□□□□□ -1.04
TRAFD1-205ENST00000548277 MCFD2Q8NI22 146 aa8.55□□□□□ -1.04
TRAFD1-205ENST00000548277 TMEM170AQ8WVE7 144 aa8.55□□□□□ -1.04
TRAFD1-205ENST00000548277 LINC00052Q96N35 136 aa8.55□□□□□ -1.04
TRAFD1-205ENST00000548277 C1QTNF4Q9BXJ3 329 aa8.55□□□□□ -1.04
TRAFD1-205ENST00000548277 U3KQE9 123 aa8.55□□□□□ -1.04
TRAFD1-205ENST00000548277 DNAH17Q9UFH2 4485 aa8.55□□□□□ -1.04
TRAFD1-205ENST00000548277 DYNC1H1Q14204 4646 aaKnown RBP8.54□□□□□ -1.04
TRAFD1-205ENST00000548277 H3BMM0 161 aa8.54□□□□□ -1.04
TRAFD1-205ENST00000548277 IL4P05112 153 aa8.54□□□□□ -1.04
TRAFD1-205ENST00000548277 IGLC1P0CG04 106 aa8.54□□□□□ -1.04
TRAFD1-205ENST00000548277 SPART-AS1P0CW21 52 aa8.54□□□□□ -1.04
TRAFD1-205ENST00000548277 SLC25A4P12235 298 aa8.54□□□□□ -1.04
TRAFD1-205ENST00000548277 OR10J1P30954 320 aa8.54□□□□□ -1.04
TRAFD1-205ENST00000548277 AP2S1P53680 142 aaPredicted RBP8.54□□□□□ -1.04
TRAFD1-205ENST00000548277 LGALS9BQ3B8N2 356 aa8.54□□□□□ -1.04
TRAFD1-205ENST00000548277 LYZL2Q7Z4W2 148 aa8.54□□□□□ -1.04
TRAFD1-205ENST00000548277 OR1S2Q8NGQ3 325 aa8.54□□□□□ -1.04
TRAFD1-205ENST00000548277 RNASEH2CQ8TDP1 164 aaKnown RBP8.54□□□□□ -1.04
TRAFD1-205ENST00000548277 IL22RA2Q969J5 263 aa8.54□□□□□ -1.04
TRAFD1-205ENST00000548277 SUPT4H1P63272 117 aaKnown RBP8.53□□□□□ -1.04
TRAFD1-205ENST00000548277 NMSQ5H8A3 153 aa8.53□□□□□ -1.04
TRAFD1-205ENST00000548277 SIGLEC15Q6ZMC9 328 aa8.53□□□□□ -1.04
TRAFD1-205ENST00000548277 OR4B1Q8NGF8 309 aa8.53□□□□□ -1.04
TRAFD1-205ENST00000548277 NPIPB3Q92617 1050 aa8.53□□□□□ -1.04
TRAFD1-205ENST00000548277 ACY3Q96HD9 319 aa8.53□□□□□ -1.04
TRAFD1-205ENST00000548277 NRN1Q9NPD7 142 aa8.53□□□□□ -1.04
TRAFD1-205ENST00000548277 PKHD1P08F94 4074 aa8.53□□□□□ -1.04
TRAFD1-205ENST00000548277 A0A0B4J2A0 478 aa8.52□□□□□ -1.05
TRAFD1-205ENST00000548277 CCR6P51684 374 aa8.52□□□□□ -1.05
TRAFD1-205ENST00000548277 YPEL3P61236 119 aaPredicted RBP8.52□□□□□ -1.05
TRAFD1-205ENST00000548277 SMCO1Q147U7 214 aa8.52□□□□□ -1.05
TRAFD1-205ENST00000548277 PYDC2Q56P42 97 aa8.52□□□□□ -1.05
TRAFD1-205ENST00000548277 FAM222AQ5U5X8 452 aa8.52□□□□□ -1.05
TRAFD1-205ENST00000548277 ETFRF1Q6IPR1 90 aa8.52□□□□□ -1.05
TRAFD1-205ENST00000548277 NOXA1Q86UR1 476 aa8.52□□□□□ -1.05
TRAFD1-205ENST00000548277 LGI3Q8N145 548 aa8.52□□□□□ -1.05
TRAFD1-205ENST00000548277 OR51G1Q8NGK1 321 aa8.52□□□□□ -1.05
TRAFD1-205ENST00000548277 NIPSNAP3BQ9BS92 247 aa8.52□□□□□ -1.05
TRAFD1-205ENST00000548277 PBDC1Q9BVG4 233 aa8.52□□□□□ -1.05
TRAFD1-205ENST00000548277 RBKSQ9H477 322 aa8.52□□□□□ -1.05
TRAFD1-205ENST00000548277 CACFD1Q9UGQ2 172 aa8.52□□□□□ -1.05
TRAFD1-205ENST00000548277 SHPKQ9UHJ6 478 aa8.52□□□□□ -1.05
TRAFD1-205ENST00000548277 U3KQ87 197 aa8.52□□□□□ -1.05
TRAFD1-205ENST00000548277 BUB3O43684 328 aa8.51□□□□□ -1.05
TRAFD1-205ENST00000548277 RD3LP0DJH9 198 aa8.51□□□□□ -1.05
TRAFD1-205ENST00000548277 ANXA3P12429 323 aa8.51□□□□□ -1.05
TRAFD1-205ENST00000548277 HLA-DRB4P13762 266 aa8.51□□□□□ -1.05
TRAFD1-205ENST00000548277 FAUP35544 74 aaKnown RBP8.51□□□□□ -1.05
TRAFD1-205ENST00000548277 KLF9Q13886 244 aaPredicted RBP8.51□□□□□ -1.05
TRAFD1-205ENST00000548277 ZNF705AQ6ZN79 300 aaPredicted RBP8.51□□□□□ -1.05
TRAFD1-205ENST00000548277 TMED4Q7Z7H5 227 aa8.51□□□□□ -1.05
TRAFD1-205ENST00000548277 TOMM5Q8N4H5 51 aa8.51□□□□□ -1.05
TRAFD1-205ENST00000548277 OR1S1Q8NH92 325 aa8.51□□□□□ -1.05
TRAFD1-205ENST00000548277 DTD1Q8TEA8 209 aa8.51□□□□□ -1.05
TRAFD1-205ENST00000548277 C7orf50Q9BRJ6 194 aaKnown RBP8.51□□□□□ -1.05
TRAFD1-205ENST00000548277 SLC35B3Q9H1N7 401 aa8.51□□□□□ -1.05
TRAFD1-205ENST00000548277 HSPB7Q9UBY9 170 aa8.51□□□□□ -1.05
TRAFD1-205ENST00000548277 HLA-DRB4X5D2U9 266 aa8.51□□□□□ -1.05
TRAFD1-205ENST00000548277 ABCA13Q86UQ4 5058 aa8.51□□□□□ -1.05
TRAFD1-205ENST00000548277 CCDC160A6NGH7 325 aa8.5□□□□□ -1.05
TRAFD1-205ENST00000548277 F6UB75 175 aa8.5□□□□□ -1.05
TRAFD1-205ENST00000548277 PSG1P11464 419 aa8.5□□□□□ -1.05
TRAFD1-205ENST00000548277 SRPXP78539 464 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms