RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 GNG11P61952 73 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 CBX3Q13185 183 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 STX3Q13277 289 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 OR5I1Q13606 314 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 VMA21Q3ZAQ7 101 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 PSMG4Q5JS54 123 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 SAMD4BQ5PRF9 694 aaKnown RBP1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 OGFRL1Q5TC84 451 aaPredicted RBP1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 IDO2Q6ZQW0 420 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 PLEKHG7Q6ZR37 379 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 TMED4Q7Z7H5 227 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 CMTM1Q8IZ96 169 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 C1orf158Q8N1D5 194 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 GAPTQ8N292 157 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 C20orf203Q8NBC4 194 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 PXT1Q8NFP0 134 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 STXBP6Q8NFX7 210 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 OR13C9Q8NGT0 318 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 OR10K1Q8NGX5 313 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 OR10AC1Q8NH08 325 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 TRUB1Q8WWH5 349 aaKnown RBP1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 ASB17Q8WXJ9 295 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 GALMQ96C23 342 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 PELI1Q96FA3 418 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 OR10C1Q96KK4 312 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 LINC00467Q9BRT7 94 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 AGMATQ9BSE5 352 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 TSSK6Q9BXA6 273 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 YIPF3Q9GZM5 350 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 TMEM231Q9H6L2 316 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 VSIRQ9H7M9 311 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 CMC2Q9NRP2 79 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 ARMC1Q9NVT9 282 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 PAK1IP1Q9NWT1 392 aaPredicted RBP1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 TVP23BQ9NYZ1 205 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 KCNIP1Q9NZI2 227 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 BAIAP2Q9UQB8 552 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 GOLT1BQ9Y3E0 138 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 FAM32AQ9Y421 112 aaKnown RBP1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 LY96Q9Y6Y9 160 aa1.31□□□□□ -2.2
DEPDC4-204ENST00000547823 TRAV14DV4A0A0A6YYC5 116 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 TRAV5A0A0B4J249 113 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 IGHV3-66A0A0C4DH42 116 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 A0A0D9SG52 128 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 A0A1W2PQL4 384 aaPredicted RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 PLAC8L1A1L4L8 177 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 HELTA6NFD8 242 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 ZNF705GA8MUZ8 300 aaPredicted RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 MCRIP1C9JLW8 97 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 M0R1X1 148 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 ITGB1BP1O14713 200 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 ANGPT2O15123 496 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 DENRO43583 198 aaKnown RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 CREBL2O60519 120 aaPredicted RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 ADAP1O75689 374 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 RPP14O95059 124 aaKnown RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 YIF1AO95070 293 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 GADD45GO95257 159 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 NAPSAO96009 420 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 EIF4EP06730 217 aaKnown RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 MRPL3P09001 348 aaKnown RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 ZNF735P0CB33 412 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 SAA1P0DJI8 122 aaPredicted RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 DEFA4P12838 97 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 HLA-DRB4P13762 266 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 SLC2A5P22732 501 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 EVI2AP22794 236 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 RPL27AP46776 148 aaKnown RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 RBM11P57052 281 aaKnown RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 SMIM11AP58511 58 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 ACTR3P61158 418 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 CDK10Q15131 360 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 RSU1Q15404 277 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 KISS1Q15726 138 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 MPV17LQ2QL34 196 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 TDRG1Q3Y452 100 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 IBA57Q5T440 356 aaKnown RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 OR8G2PQ6IF36 304 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 ZNF322Q6U7Q0 402 aaPredicted RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 EPGNQ6UW88 154 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 RASSF6Q6ZTQ3 369 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 FAM220AQ7Z4H9 259 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 ZNF709Q8N972 641 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 OR8J3Q8NGG0 315 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 OR52N1Q8NH53 320 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 MRPL30Q8TCC3 161 aaKnown RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 DCANP1Q8TF63 244 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 TNFAIP8L1Q8WVP5 186 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 C7orf34Q96L11 122 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 NSMCE2Q96MF7 247 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 SH3GL1Q99961 368 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 KCTD14Q9BQ13 255 aaPredicted RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 C7orf50Q9BRJ6 194 aaKnown RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 HINT2Q9BX68 163 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 VAX2Q9UIW0 290 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 RCL1Q9Y2P8 373 aaKnown RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 LRRC42Q9Y546 428 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 TMEM14AQ9Y6G1 99 aa1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 V9GYY5 206 aaPredicted RBP1.3□□□□□ -2.2
DEPDC4-204ENST00000547823 HLA-DRB4X5D2U9 266 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms