RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 G3V4G9 280 aa17.6■□□□□ 0.41
SMARCD1-203ENST00000547247 ADAMTSL5Q6ZMM2 481 aa17.6■□□□□ 0.41
SMARCD1-203ENST00000547247 ZNF546Q86UE3 836 aa17.6■□□□□ 0.41
SMARCD1-203ENST00000547247 LSM4Q9Y4Z0 139 aaKnown RBP17.6■□□□□ 0.41
SMARCD1-203ENST00000547247 WIPF1O43516 503 aa17.59■□□□□ 0.41
SMARCD1-203ENST00000547247 IL4P05112 153 aa17.59■□□□□ 0.41
SMARCD1-203ENST00000547247 EDN2P20800 178 aa17.59■□□□□ 0.41
SMARCD1-203ENST00000547247 OR2F1Q13607 317 aa17.59■□□□□ 0.41
SMARCD1-203ENST00000547247 CLINT1Q14677 625 aa17.59■□□□□ 0.41
SMARCD1-203ENST00000547247 AQP10Q96PS8 301 aa17.59■□□□□ 0.41
SMARCD1-203ENST00000547247 UBE2L5PA0A1B0GUS4 154 aa17.58■□□□□ 0.41
SMARCD1-203ENST00000547247 A0A1B0GVG6 124 aa17.58■□□□□ 0.41
SMARCD1-203ENST00000547247 SMLR1H3BR10 107 aa17.58■□□□□ 0.41
SMARCD1-203ENST00000547247 C8orf88P0DMB2 117 aa17.58■□□□□ 0.41
SMARCD1-203ENST00000547247 CYP2G1PQ6ZSU1 146 aa17.58■□□□□ 0.41
SMARCD1-203ENST00000547247 INO80EQ8NBZ0 244 aaPredicted RBP17.58■□□□□ 0.41
SMARCD1-203ENST00000547247 WDR83OSQ9Y284 106 aa17.58■□□□□ 0.41
SMARCD1-203ENST00000547247 CFDP00746 253 aaPredicted RBP17.57■□□□□ 0.4
SMARCD1-203ENST00000547247 SELENOTP62341 195 aa17.57■□□□□ 0.4
SMARCD1-203ENST00000547247 RAB31Q13636 194 aa17.57■□□□□ 0.4
SMARCD1-203ENST00000547247 BPIFCQ8NFQ6 507 aa17.57■□□□□ 0.4
SMARCD1-203ENST00000547247 DYNLRB2Q8TF09 96 aa17.57■□□□□ 0.4
SMARCD1-203ENST00000547247 RNF125Q96EQ8 232 aa17.57■□□□□ 0.4
SMARCD1-203ENST00000547247 METTL26Q96S19 204 aa17.57■□□□□ 0.4
SMARCD1-203ENST00000547247 WI2-2373I1.2A0A1W2PRP0 233 aa17.57■□□□□ 0.4
SMARCD1-203ENST00000547247 AGPAT2O15120 278 aa17.57■□□□□ 0.4
SMARCD1-203ENST00000547247 NPPCP23582 126 aa17.57■□□□□ 0.4
SMARCD1-203ENST00000547247 ST6GAL2Q96JF0 529 aa17.57■□□□□ 0.4
SMARCD1-203ENST00000547247 TNFSF18Q9UNG2 199 aa17.57■□□□□ 0.4
SMARCD1-203ENST00000547247 IGHV7-4-1A0A0J9YVY3 117 aa17.56■□□□□ 0.4
SMARCD1-203ENST00000547247 DFFBO76075 338 aa17.56■□□□□ 0.4
SMARCD1-203ENST00000547247 IGLV1-51P01701 117 aa17.56■□□□□ 0.4
SMARCD1-203ENST00000547247 GATA2P23769 480 aaPredicted RBP17.56■□□□□ 0.4
SMARCD1-203ENST00000547247 USF2Q15853 346 aaPredicted RBP17.56■□□□□ 0.4
SMARCD1-203ENST00000547247 BTNL8Q6UX41 500 aa17.56■□□□□ 0.4
SMARCD1-203ENST00000547247 TMEM182Q6ZP80 229 aaPredicted RBP17.56■□□□□ 0.4
SMARCD1-203ENST00000547247 MGST2Q99735 147 aa17.56■□□□□ 0.4
SMARCD1-203ENST00000547247 ATP5SQ99766 215 aa17.56■□□□□ 0.4
SMARCD1-203ENST00000547247 PBDC1Q9BVG4 233 aa17.56■□□□□ 0.4
SMARCD1-203ENST00000547247 SMIM3Q9BZL3 60 aa17.56■□□□□ 0.4
SMARCD1-203ENST00000547247 SMPXQ9UHP9 88 aa17.56■□□□□ 0.4
SMARCD1-203ENST00000547247 LYZP61626 148 aa17.55■□□□□ 0.4
SMARCD1-203ENST00000547247 TECRQ9NZ01 308 aaKnown RBP17.55■□□□□ 0.4
SMARCD1-203ENST00000547247 MPDU1O75352 247 aa17.54■□□□□ 0.4
SMARCD1-203ENST00000547247 FGF7P21781 194 aa17.54■□□□□ 0.4
SMARCD1-203ENST00000547247 CRYBB3P26998 211 aa17.54■□□□□ 0.4
SMARCD1-203ENST00000547247 CAMLGP49069 296 aa17.54■□□□□ 0.4
SMARCD1-203ENST00000547247 RHPN1-AS1Q9BWJ2 59 aa17.54■□□□□ 0.4
SMARCD1-203ENST00000547247 MLXQ9UH92 298 aa17.54■□□□□ 0.4
SMARCD1-203ENST00000547247 RABAC1Q9UI14 185 aa17.54■□□□□ 0.4
SMARCD1-203ENST00000547247 SLC45A2Q9UMX9 530 aa17.54■□□□□ 0.4
SMARCD1-203ENST00000547247 IGHV3-49A0A0A0MS15 119 aa17.53■□□□□ 0.4
SMARCD1-203ENST00000547247 RNF222A6NCQ9 220 aa17.53■□□□□ 0.4
SMARCD1-203ENST00000547247 BMI1P35226 326 aa17.53■□□□□ 0.4
SMARCD1-203ENST00000547247 DEFB114Q30KQ6 69 aa17.53■□□□□ 0.4
SMARCD1-203ENST00000547247 AKAP14Q86UN6 197 aa17.53■□□□□ 0.4
SMARCD1-203ENST00000547247 NARS2Q96I59 477 aaKnown RBP17.53■□□□□ 0.4
SMARCD1-203ENST00000547247 ZMAT5Q9UDW3 170 aaKnown RBP17.53■□□□□ 0.4
SMARCD1-203ENST00000547247 IGHV3OR16-13A0A075B7E8 117 aa17.53■□□□□ 0.4
SMARCD1-203ENST00000547247 IGHV3-74A0A0B4J1X5 117 aa17.53■□□□□ 0.4
SMARCD1-203ENST00000547247 A0A1W2PS18 150 aa17.53■□□□□ 0.4
SMARCD1-203ENST00000547247 ARPC5O15511 151 aa17.53■□□□□ 0.4
SMARCD1-203ENST00000547247 HNRNPCP07910 306 aaKnown RBP eCLIP17.53■□□□□ 0.4
SMARCD1-203ENST00000547247 TCTE3Q8IZS6 198 aa17.53■□□□□ 0.4
SMARCD1-203ENST00000547247 GGTLC1Q9BX51 225 aa17.53■□□□□ 0.4
SMARCD1-203ENST00000547247 FBXL17Q9UF56 701 aa17.53■□□□□ 0.4
SMARCD1-203ENST00000547247 CHEK1O14757 476 aa17.52■□□□□ 0.39
SMARCD1-203ENST00000547247 IFNA5P01569 189 aa17.52■□□□□ 0.39
SMARCD1-203ENST00000547247 LINC00869P0C866 280 aa17.52■□□□□ 0.39
SMARCD1-203ENST00000547247 EGFEM1PQ0D2K5 195 aa17.52■□□□□ 0.39
SMARCD1-203ENST00000547247 BEAN1Q3B7T3 259 aa17.52■□□□□ 0.39
SMARCD1-203ENST00000547247 OR2K2Q8NGT1 345 aa17.52■□□□□ 0.39
SMARCD1-203ENST00000547247 WDR61Q9GZS3 305 aaKnown RBP17.52■□□□□ 0.39
SMARCD1-203ENST00000547247 TMEM231Q9H6L2 316 aa17.52■□□□□ 0.39
SMARCD1-203ENST00000547247 APOHP02749 345 aaPredicted RBP17.51■□□□□ 0.39
SMARCD1-203ENST00000547247 ORM2P19652 201 aa17.51■□□□□ 0.39
SMARCD1-203ENST00000547247 EIF2B2P49770 351 aaKnown RBP17.51■□□□□ 0.39
SMARCD1-203ENST00000547247 AP2S1P53680 142 aaPredicted RBP17.51■□□□□ 0.39
SMARCD1-203ENST00000547247 CD300EQ496F6 205 aaPredicted RBP17.51■□□□□ 0.39
SMARCD1-203ENST00000547247 VSIRQ9H7M9 311 aa17.51■□□□□ 0.39
SMARCD1-203ENST00000547247 WFDC1Q9HC57 220 aa17.51■□□□□ 0.39
SMARCD1-203ENST00000547247 PFDN2Q9UHV9 154 aa17.51■□□□□ 0.39
SMARCD1-203ENST00000547247 HMSDA8MTL9 139 aa17.5■□□□□ 0.39
SMARCD1-203ENST00000547247 OPCMLQ14982 345 aa17.5■□□□□ 0.39
SMARCD1-203ENST00000547247 KPRPQ5T749 579 aaPredicted RBP17.5■□□□□ 0.39
SMARCD1-203ENST00000547247 LCN12Q6JVE5 192 aa17.5■□□□□ 0.39
SMARCD1-203ENST00000547247 OR11H4Q8NGC9 324 aa17.5■□□□□ 0.39
SMARCD1-203ENST00000547247 ST8SIA2Q92186 375 aa17.5■□□□□ 0.39
SMARCD1-203ENST00000547247 NPCDR1Q9BY65 106 aa17.5■□□□□ 0.39
SMARCD1-203ENST00000547247 MFFQ9GZY8 342 aa17.5■□□□□ 0.39
SMARCD1-203ENST00000547247 SELENOKQ9Y6D0 94 aa17.5■□□□□ 0.39
SMARCD1-203ENST00000547247 U3KQE9 123 aa17.5■□□□□ 0.39
SMARCD1-203ENST00000547247 IGHV3-66A0A0C4DH42 116 aa17.49■□□□□ 0.39
SMARCD1-203ENST00000547247 RPL29P47914 159 aaKnown RBP17.49■□□□□ 0.39
SMARCD1-203ENST00000547247 PLP1P60201 277 aa17.49■□□□□ 0.39
SMARCD1-203ENST00000547247 OR1B1Q8NGR6 318 aa17.49■□□□□ 0.39
SMARCD1-203ENST00000547247 SCGB1C1Q8TD33 95 aa17.49■□□□□ 0.39
SMARCD1-203ENST00000547247 GRAMD2BQ96HH9 432 aa17.49■□□□□ 0.39
SMARCD1-203ENST00000547247 NOTCH1P46531 2555 aa17.49■□□□□ 0.39
SMARCD1-203ENST00000547247 ZNF266Q14584 549 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 209.3 ms