RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 C19orf24Q9BVV8 132 aa12.22□□□□□ -0.45
TRAFD1-203ENST00000547063 SLC39A9Q9NUM3 307 aa12.22□□□□□ -0.45
TRAFD1-203ENST00000547063 SETD2Q9BYW2 2564 aaPredicted RBP12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 PPP5D1E7EU14 171 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 BMPR1BO00238 502 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 NDUFA4O00483 81 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 OR2C1O95371 312 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 IFNA7P01567 189 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 LINC00869P0C866 280 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 RAB5CP51148 216 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 RPEL1Q2QD12 228 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 ACOT6Q3I5F7 207 aaPredicted RBP12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 FAM106AQ4KMX7 169 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 FFAR4Q5NUL3 377 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 AKR1C8PQ5T2L2 129 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 MIC13Q5XKP0 118 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 C11orf44Q8N8P7 122 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 OR1L4Q8NGR5 311 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 DPF1Q92782 380 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 PFDN5Q99471 154 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 SH3BGRL3Q9H299 93 aa12.21□□□□□ -0.45
TRAFD1-203ENST00000547063 ELOA3CA0A087WX78 387 aaPredicted RBP12.2□□□□□ -0.46
TRAFD1-203ENST00000547063 PLP1P60201 277 aa12.2□□□□□ -0.46
TRAFD1-203ENST00000547063 TEX261Q6UWH6 196 aa12.2□□□□□ -0.46
TRAFD1-203ENST00000547063 GPHB5Q86YW7 130 aa12.2□□□□□ -0.46
TRAFD1-203ENST00000547063 TMED6Q8WW62 240 aa12.2□□□□□ -0.46
TRAFD1-203ENST00000547063 RNF2Q99496 336 aa12.2□□□□□ -0.46
TRAFD1-203ENST00000547063 PFDN2Q9UHV9 154 aa12.2□□□□□ -0.46
TRAFD1-203ENST00000547063 PUS1Q9Y606 427 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRAFD1-203ENST00000547063 LINC01619G3V211 115 aa12.19□□□□□ -0.46
TRAFD1-203ENST00000547063 YIF1AO95070 293 aa12.19□□□□□ -0.46
TRAFD1-203ENST00000547063 TRBV12-3P01733 135 aa12.19□□□□□ -0.46
TRAFD1-203ENST00000547063 IL4P05112 153 aa12.19□□□□□ -0.46
TRAFD1-203ENST00000547063 M6PRP20645 277 aa12.19□□□□□ -0.46
TRAFD1-203ENST00000547063 DPPA3Q6W0C5 159 aa12.19□□□□□ -0.46
TRAFD1-203ENST00000547063 LURAP1LQ8IV03 231 aa12.19□□□□□ -0.46
TRAFD1-203ENST00000547063 OR1N2Q8NGR9 330 aa12.19□□□□□ -0.46
TRAFD1-203ENST00000547063 GATAD1Q8WUU5 269 aa12.19□□□□□ -0.46
TRAFD1-203ENST00000547063 RNF125Q96EQ8 232 aa12.19□□□□□ -0.46
TRAFD1-203ENST00000547063 RNF24Q9Y225 148 aa12.19□□□□□ -0.46
TRAFD1-203ENST00000547063 WI2-2373I1.2A0A1W2PRP0 233 aa12.18□□□□□ -0.46
TRAFD1-203ENST00000547063 A0A1W2PRX2 142 aa12.18□□□□□ -0.46
TRAFD1-203ENST00000547063 COX7A2P2O60397 106 aa12.18□□□□□ -0.46
TRAFD1-203ENST00000547063 HYPMO75409 117 aa12.18□□□□□ -0.46
TRAFD1-203ENST00000547063 GATA2P23769 480 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-203ENST00000547063 ELLP55199 621 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-203ENST00000547063 LYZP61626 148 aa12.18□□□□□ -0.46
TRAFD1-203ENST00000547063 TMEM41BQ5BJD5 291 aa12.18□□□□□ -0.46
TRAFD1-203ENST00000547063 ALKAL2Q6UX46 152 aa12.18□□□□□ -0.46
TRAFD1-203ENST00000547063 TMEM182Q6ZP80 229 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-203ENST00000547063 OR11H1Q8NG94 326 aa12.18□□□□□ -0.46
TRAFD1-203ENST00000547063 CITED1Q99966 193 aa12.18□□□□□ -0.46
TRAFD1-203ENST00000547063 DNAJC4Q9NNZ3 241 aa12.18□□□□□ -0.46
TRAFD1-203ENST00000547063 IGHV4OR15-8A0A075B7B6 117 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 A0A087WW49 117 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 OR5G3P0C626 314 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 ORM2P19652 201 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 HOXD3P31249 432 aaPredicted RBP12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 KRTAP10-3P60369 221 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 C10orf113Q5VZT2 155 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 TOMM20LQ6UXN7 152 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 C8orf86Q6ZUL3 223 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 ZNF680Q8NEM1 530 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 OR10G4Q8NGN3 311 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 OR10G9Q8NGN4 311 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 OR10G7Q8NGN6 311 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 OR1B1Q8NGR6 318 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 LRRC20Q8TCA0 184 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 RNF141Q8WVD5 230 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 PBDC1Q9BVG4 233 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 UBQLN2Q9UHD9 624 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 ATRQ13535 2644 aa12.17□□□□□ -0.46
TRAFD1-203ENST00000547063 IGHV3-35A0A0C4DH35 117 aa12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 CCL24O00175 119 aa12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 LGALS9O00182 355 aa12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 SULT1A2P50226 295 aa12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 RHOBP62745 196 aa12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 C12orf54Q6X4T0 127 aa12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 C18orf65Q6ZTR6 163 aa12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 ZNF767PQ75MW2 155 aa12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 C1QL4Q86Z23 238 aa12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 TMEM190Q8WZ59 177 aa12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 NARS2Q96I59 477 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 ZNF747Q9BV97 191 aa12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 MRPL32Q9BYC8 188 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 ZFAND3Q9H8U3 227 aa12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 RABAC1Q9UI14 185 aa12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 HIGD1AQ9Y241 93 aa12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 UFC1Q9Y3C8 167 aa12.16□□□□□ -0.46
TRAFD1-203ENST00000547063 A0A1W2PPV4 95 aa12.15□□□□□ -0.46
TRAFD1-203ENST00000547063 ZNF320A2RRD8 509 aa12.15□□□□□ -0.46
TRAFD1-203ENST00000547063 K7EMT4 169 aa12.15□□□□□ -0.46
TRAFD1-203ENST00000547063 NPPCP23582 126 aa12.15□□□□□ -0.46
TRAFD1-203ENST00000547063 MYCNOSP40205 109 aa12.15□□□□□ -0.46
TRAFD1-203ENST00000547063 NSUN5P1Q3KNT7 163 aa12.15□□□□□ -0.46
TRAFD1-203ENST00000547063 REC114Q7Z4M0 266 aa12.15□□□□□ -0.46
TRAFD1-203ENST00000547063 C3orf56Q8N813 242 aa12.15□□□□□ -0.46
TRAFD1-203ENST00000547063 RAX2Q96IS3 184 aa12.15□□□□□ -0.46
TRAFD1-203ENST00000547063 METTL26Q96S19 204 aa12.15□□□□□ -0.46
TRAFD1-203ENST00000547063 C20orf24Q9BUV8 137 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms