RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 IAH1Q2TAA2 248 aaPredicted RBP8.82□□□□□ -1
YBX3-217ENST00000546164 THAP8Q8NA92 274 aa8.82□□□□□ -1
YBX3-217ENST00000546164 ZBTB8BQ8NAP8 495 aaPredicted RBP8.82□□□□□ -1
YBX3-217ENST00000546164 NARS2Q96I59 477 aaKnown RBP8.82□□□□□ -1
YBX3-217ENST00000546164 GGTLC1Q9BX51 225 aa8.82□□□□□ -1
YBX3-217ENST00000546164 STRAPQ9Y3F4 350 aaKnown RBP8.82□□□□□ -1
YBX3-217ENST00000546164 IGHV3-66A0A0C4DH42 116 aa8.81□□□□□ -1
YBX3-217ENST00000546164 ZFP92A6NM28 416 aa8.81□□□□□ -1
YBX3-217ENST00000546164 IL4P05112 153 aa8.81□□□□□ -1
YBX3-217ENST00000546164 FABP1P07148 127 aa8.81□□□□□ -1
YBX3-217ENST00000546164 HNRNPCP07910 306 aaKnown RBP eCLIP8.81□□□□□ -14e-7■□□□□ 9.3
YBX3-217ENST00000546164 P2RY1P47900 373 aa8.81□□□□□ -1
YBX3-217ENST00000546164 SPANXN5Q5MJ07 72 aa8.81□□□□□ -1
YBX3-217ENST00000546164 OR51G1Q8NGK1 321 aa8.81□□□□□ -1
YBX3-217ENST00000546164 GRAMD2BQ96HH9 432 aa8.81□□□□□ -1
YBX3-217ENST00000546164 SMIM8Q96KF7 97 aa8.81□□□□□ -1
YBX3-217ENST00000546164 RAB40CQ96S21 281 aa8.81□□□□□ -1
YBX3-217ENST00000546164 TRGV9Q99603 122 aa8.81□□□□□ -1
YBX3-217ENST00000546164 MS4A6AQ9H2W1 248 aa8.81□□□□□ -1
YBX3-217ENST00000546164 UBQLN2Q9UHD9 624 aa8.81□□□□□ -1
YBX3-217ENST00000546164 IGKV1OR2-108A0A075B7D4 117 aa8.8□□□□□ -1
YBX3-217ENST00000546164 HELTA6NFD8 242 aa8.8□□□□□ -1
YBX3-217ENST00000546164 H3BP45 60 aa8.8□□□□□ -1
YBX3-217ENST00000546164 SSSCA1O60232 199 aa8.8□□□□□ -1
YBX3-217ENST00000546164 IL5P05113 134 aa8.8□□□□□ -1
YBX3-217ENST00000546164 NUP62P37198 522 aaPredicted RBP8.8□□□□□ -1
YBX3-217ENST00000546164 PAX9P55771 341 aa8.8□□□□□ -1
YBX3-217ENST00000546164 TAS2R30P59541 319 aa8.8□□□□□ -1
YBX3-217ENST00000546164 IFITM3Q01628 133 aa8.8□□□□□ -1
YBX3-217ENST00000546164 ZNF90Q03938 601 aa8.8□□□□□ -1
YBX3-217ENST00000546164 OR8G2PQ6IF36 304 aa8.8□□□□□ -1
YBX3-217ENST00000546164 C16orf54Q6UWD8 224 aa8.8□□□□□ -1
YBX3-217ENST00000546164 TMEM14EPQ6UXP3 125 aa8.8□□□□□ -1
YBX3-217ENST00000546164 C12orf45Q8N5I9 185 aaPredicted RBP8.8□□□□□ -1
YBX3-217ENST00000546164 GLMPQ8WWB7 406 aa8.8□□□□□ -1
YBX3-217ENST00000546164 RNF125Q96EQ8 232 aa8.8□□□□□ -1
YBX3-217ENST00000546164 SEC22CQ9BRL7 303 aa8.8□□□□□ -1
YBX3-217ENST00000546164 MAP6D1Q9H9H5 199 aa8.8□□□□□ -1
YBX3-217ENST00000546164 EDA2RQ9HAV5 297 aa8.8□□□□□ -1
YBX3-217ENST00000546164 PAIP2BQ9ULR5 123 aaKnown RBP8.8□□□□□ -1
YBX3-217ENST00000546164 DYNC2H1Q8NCM8 4307 aaKnown RBP8.79□□□□□ -1
YBX3-217ENST00000546164 IGKV3-7A0A075B6H7 116 aa8.79□□□□□ -1
YBX3-217ENST00000546164 KIR2DL5BA0A0G2JN68 375 aa8.79□□□□□ -1
YBX3-217ENST00000546164 KIR2DL5BA0A0G2JPC4 375 aa8.79□□□□□ -1
YBX3-217ENST00000546164 PMS2P5A8MQ11 134 aa8.79□□□□□ -1
YBX3-217ENST00000546164 BUB3O43684 328 aa8.79□□□□□ -1
YBX3-217ENST00000546164 TSC22D2O75157 780 aa8.79□□□□□ -1
YBX3-217ENST00000546164 CFDP00746 253 aaPredicted RBP8.79□□□□□ -1
YBX3-217ENST00000546164 TFPI2P48307 235 aa8.79□□□□□ -1
YBX3-217ENST00000546164 EIF2B2P49770 351 aaKnown RBP8.79□□□□□ -1
YBX3-217ENST00000546164 AP2S1P53680 142 aaPredicted RBP8.79□□□□□ -1
YBX3-217ENST00000546164 ACOT7LQ6ZUV0 252 aa8.79□□□□□ -1
YBX3-217ENST00000546164 KIR2DL5AQ8N109 375 aa8.79□□□□□ -1
YBX3-217ENST00000546164 GBGT1Q8N5D6 347 aa8.79□□□□□ -1
YBX3-217ENST00000546164 KIR2DL5BQ8NHK3 375 aa8.79□□□□□ -1
YBX3-217ENST00000546164 ENKURQ8TC29 256 aa8.79□□□□□ -1
YBX3-217ENST00000546164 PSENENQ9NZ42 101 aa8.79□□□□□ -1
YBX3-217ENST00000546164 GSKIPQ9P0R6 139 aa8.79□□□□□ -1
YBX3-217ENST00000546164 RABAC1Q9UI14 185 aa8.79□□□□□ -1
YBX3-217ENST00000546164 RCL1Q9Y2P8 373 aaKnown RBP8.79□□□□□ -1
YBX3-217ENST00000546164 STARD9Q9P2P6 4700 aa8.79□□□□□ -1
YBX3-217ENST00000546164 SNRPGP15A8MWD9 76 aa8.78□□□□□ -1
YBX3-217ENST00000546164 FNDC10F2Z333 226 aa8.78□□□□□ -1
YBX3-217ENST00000546164 C3orf84H3BNL1 204 aa8.78□□□□□ -1
YBX3-217ENST00000546164 K7EQG2 157 aa8.78□□□□□ -1
YBX3-217ENST00000546164 DNASE2O00115 360 aaPredicted RBP8.78□□□□□ -1
YBX3-217ENST00000546164 UBE2CO00762 179 aa8.78□□□□□ -1
YBX3-217ENST00000546164 CCSO14618 274 aa8.78□□□□□ -1
YBX3-217ENST00000546164 SCGB1D2O95969 90 aa8.78□□□□□ -1
YBX3-217ENST00000546164 MBPP02686 304 aaPredicted RBP8.78□□□□□ -1
YBX3-217ENST00000546164 APOC4P55056 127 aa8.78□□□□□ -1
YBX3-217ENST00000546164 RPL11P62913 178 aaKnown RBP8.78□□□□□ -1
YBX3-217ENST00000546164 TMEM144Q7Z5S9 345 aa8.78□□□□□ -1
YBX3-217ENST00000546164 DCANP1Q8TF63 244 aa8.78□□□□□ -1
YBX3-217ENST00000546164 PFDN2Q9UHV9 154 aa8.78□□□□□ -1
YBX3-217ENST00000546164 SACSQ9NZJ4 4579 aa8.77□□□□□ -1.01
YBX3-217ENST00000546164 C7orf66A4D0T2 115 aa8.77□□□□□ -1.01
YBX3-217ENST00000546164 DLK1P80370 383 aa8.77□□□□□ -1.01
YBX3-217ENST00000546164 IL15RAQ13261 267 aa8.77□□□□□ -1.01
YBX3-217ENST00000546164 Q6ZWC4 215 aa8.77□□□□□ -1.01
YBX3-217ENST00000546164 NRARPQ7Z6K4 114 aa8.77□□□□□ -1.01
YBX3-217ENST00000546164 WFDC3Q8IUB2 231 aa8.77□□□□□ -1.01
YBX3-217ENST00000546164 APRG1Q8IVJ8 170 aa8.77□□□□□ -1.01
YBX3-217ENST00000546164 FAM24BQ8N5W8 94 aa8.77□□□□□ -1.01
YBX3-217ENST00000546164 STXBP6Q8NFX7 210 aa8.77□□□□□ -1.01
YBX3-217ENST00000546164 MUC7Q8TAX7 377 aa8.77□□□□□ -1.01
YBX3-217ENST00000546164 C2orf50Q96LR7 162 aa8.77□□□□□ -1.01
YBX3-217ENST00000546164 PBDC1Q9BVG4 233 aa8.77□□□□□ -1.01
YBX3-217ENST00000546164 SEPSECSQ9HD40 501 aaKnown RBP8.77□□□□□ -1.01
YBX3-217ENST00000546164 RETNQ9HD89 108 aa8.77□□□□□ -1.01
YBX3-217ENST00000546164 SLC45A2Q9UMX9 530 aa8.77□□□□□ -1.01
YBX3-217ENST00000546164 TP53TG1Q9Y2A0 90 aa8.77□□□□□ -1.01
YBX3-217ENST00000546164 FAM25EA8MYX2 175 aa8.76□□□□□ -1.01
YBX3-217ENST00000546164 PRAF2O60831 178 aa8.76□□□□□ -1.01
YBX3-217ENST00000546164 METTL15P1P0C7V9 234 aa8.76□□□□□ -1.01
YBX3-217ENST00000546164 DEFB131AP59861 70 aa8.76□□□□□ -1.01
YBX3-217ENST00000546164 AKR1C1Q04828 323 aa8.76□□□□□ -1.01
YBX3-217ENST00000546164 ZNF124Q15973 351 aa8.76□□□□□ -1.01
YBX3-217ENST00000546164 C1orf194Q5T5A4 169 aa8.76□□□□□ -1.01
YBX3-217ENST00000546164 SIGLEC15Q6ZMC9 328 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms