RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 C1orf158Q8N1D5 194 aa11.79□□□□□ -0.52
CPSF7-225ENST00000545934 OR4D10Q8NGI6 311 aa11.79□□□□□ -0.52
CPSF7-225ENST00000545934 TERB2Q8NHR7 220 aa11.79□□□□□ -0.52
CPSF7-225ENST00000545934 ZFAND1Q8TCF1 268 aa11.79□□□□□ -0.52
CPSF7-225ENST00000545934 GLYATL2Q8WU03 294 aa11.79□□□□□ -0.52
CPSF7-225ENST00000545934 IGHV3OR16-12A0A075B7B8 117 aa11.78□□□□□ -0.52
CPSF7-225ENST00000545934 IGKV3-20P01619 116 aa11.78□□□□□ -0.52
CPSF7-225ENST00000545934 PSMB3P49720 205 aa11.78□□□□□ -0.52
CPSF7-225ENST00000545934 FAM3BP58499 235 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-225ENST00000545934 TMEM88Q6PEY1 159 aa11.78□□□□□ -0.52
CPSF7-225ENST00000545934 OR51G1Q8NGK1 321 aa11.78□□□□□ -0.52
CPSF7-225ENST00000545934 OR52I2Q8NH67 350 aa11.78□□□□□ -0.52
CPSF7-225ENST00000545934 RNASE11Q8TAA1 199 aaKnown RBP11.78□□□□□ -0.52
CPSF7-225ENST00000545934 RNF125Q96EQ8 232 aa11.78□□□□□ -0.52
CPSF7-225ENST00000545934 ABHD1Q96SE0 405 aa11.78□□□□□ -0.52
CPSF7-225ENST00000545934 SLC35B3Q9H1N7 401 aa11.78□□□□□ -0.52
CPSF7-225ENST00000545934 MTFP1Q9UDX5 166 aa11.78□□□□□ -0.52
CPSF7-225ENST00000545934 OR5AC1P0C628 307 aa11.77□□□□□ -0.53
CPSF7-225ENST00000545934 NUP62P37198 522 aaPredicted RBP11.77□□□□□ -0.53
CPSF7-225ENST00000545934 PAX9P55771 341 aa11.77□□□□□ -0.53
CPSF7-225ENST00000545934 NCS1P62166 190 aa11.77□□□□□ -0.53
CPSF7-225ENST00000545934 TNP2Q05952 138 aa11.77□□□□□ -0.53
CPSF7-225ENST00000545934 NMSQ5H8A3 153 aa11.77□□□□□ -0.53
CPSF7-225ENST00000545934 SPATA31B1PQ5VZV4 182 aa11.77□□□□□ -0.53
CPSF7-225ENST00000545934 OR8G2PQ6IF36 304 aa11.77□□□□□ -0.53
CPSF7-225ENST00000545934 SELENOHQ8IZQ5 122 aaKnown RBP11.77□□□□□ -0.53
CPSF7-225ENST00000545934 MARCH1Q8TCQ1 289 aa11.77□□□□□ -0.53
CPSF7-225ENST00000545934 GPR146Q96CH1 333 aa11.77□□□□□ -0.53
CPSF7-225ENST00000545934 ACY3Q96HD9 319 aa11.77□□□□□ -0.53
CPSF7-225ENST00000545934 CACNG5Q9UF02 275 aa11.77□□□□□ -0.53
CPSF7-225ENST00000545934 YTHDF2Q9Y5A9 579 aaKnown RBP11.77□□□□□ -0.53
CPSF7-225ENST00000545934 TEX13DA0A0J9YY54 714 aaPredicted RBP11.76□□□□□ -0.53
CPSF7-225ENST00000545934 LOC102723971A0A1B0GUV8 181 aa11.76□□□□□ -0.53
CPSF7-225ENST00000545934 A8MTW9 85 aa11.76□□□□□ -0.53
CPSF7-225ENST00000545934 HTN3P15516 51 aa11.76□□□□□ -0.53
CPSF7-225ENST00000545934 RNASE12Q5GAN4 147 aaKnown RBP11.76□□□□□ -0.53
CPSF7-225ENST00000545934 RBPMSQ93062 196 aaKnown RBP11.76□□□□□ -0.53
CPSF7-225ENST00000545934 LINC00052Q96N35 136 aa11.76□□□□□ -0.53
CPSF7-225ENST00000545934 RTBDNQ9BSG5 229 aaPredicted RBP11.76□□□□□ -0.53
CPSF7-225ENST00000545934 GOLT1BQ9Y3E0 138 aa11.76□□□□□ -0.53
CPSF7-225ENST00000545934 ID1P41134 155 aa11.75□□□□□ -0.53
CPSF7-225ENST00000545934 RORCP51449 518 aa11.75□□□□□ -0.53
CPSF7-225ENST00000545934 PSG9Q00887 426 aa11.75□□□□□ -0.53
CPSF7-225ENST00000545934 MEF2DQ14814 521 aa11.75□□□□□ -0.53
CPSF7-225ENST00000545934 C15orf53Q8NAA6 179 aa11.75□□□□□ -0.53
CPSF7-225ENST00000545934 TMEM229BQ8NBD8 167 aa11.75□□□□□ -0.53
CPSF7-225ENST00000545934 NAA60Q9H7X0 242 aa11.75□□□□□ -0.53
CPSF7-225ENST00000545934 IGKV1D-37A0A075B6S9 117 aa11.74□□□□□ -0.53
CPSF7-225ENST00000545934 A0A0J9YX75 114 aa11.74□□□□□ -0.53
CPSF7-225ENST00000545934 CEBPZOSA8MTT3 80 aa11.74□□□□□ -0.53
CPSF7-225ENST00000545934 C16orf90A8MZG2 172 aa11.74□□□□□ -0.53
CPSF7-225ENST00000545934 HBE1P02100 147 aa11.74□□□□□ -0.53
CPSF7-225ENST00000545934 ALDH3B2P48448 385 aa11.74□□□□□ -0.53
CPSF7-225ENST00000545934 SUPT4H1P63272 117 aaKnown RBP11.74□□□□□ -0.53
CPSF7-225ENST00000545934 SCGB2B2Q4G0G5 96 aa11.74□□□□□ -0.53
CPSF7-225ENST00000545934 C1orf194Q5T5A4 169 aa11.74□□□□□ -0.53
CPSF7-225ENST00000545934 FAM78BQ5VT40 261 aa11.74□□□□□ -0.53
CPSF7-225ENST00000545934 NOXA1Q86UR1 476 aa11.74□□□□□ -0.53
CPSF7-225ENST00000545934 MAPKAPK5-AS1Q8N8E1 139 aa11.74□□□□□ -0.53
CPSF7-225ENST00000545934 OR4B1Q8NGF8 309 aa11.74□□□□□ -0.53
CPSF7-225ENST00000545934 TMEM56-RWDD3S4R434 201 aa11.74□□□□□ -0.53
CPSF7-225ENST00000545934 F6UB75 175 aa11.73□□□□□ -0.53
CPSF7-225ENST00000545934 ISLRO14498 428 aa11.73□□□□□ -0.53
CPSF7-225ENST00000545934 TAS2R19P59542 299 aa11.73□□□□□ -0.53
CPSF7-225ENST00000545934 VBP1P61758 197 aa11.73□□□□□ -0.53
CPSF7-225ENST00000545934 KLF9Q13886 244 aaPredicted RBP11.73□□□□□ -0.53
CPSF7-225ENST00000545934 RRN3P1Q2M238 152 aa11.73□□□□□ -0.53
CPSF7-225ENST00000545934 TMEM268Q5VZI3 342 aa11.73□□□□□ -0.53
CPSF7-225ENST00000545934 AMTNQ6UX39 209 aa11.73□□□□□ -0.53
CPSF7-225ENST00000545934 ZNRF2Q8NHG8 242 aa11.73□□□□□ -0.53
CPSF7-225ENST00000545934 CACFD1Q9UGQ2 172 aa11.73□□□□□ -0.53
CPSF7-225ENST00000545934 PFDN2Q9UHV9 154 aa11.73□□□□□ -0.53
CPSF7-225ENST00000545934 NBDYA0A0U1RRE5 68 aa11.72□□□□□ -0.53
CPSF7-225ENST00000545934 CRYM-AS1A6NIL9 109 aa11.72□□□□□ -0.53
CPSF7-225ENST00000545934 RAB3DO95716 219 aa11.72□□□□□ -0.53
CPSF7-225ENST00000545934 DAD1P61803 113 aa11.72□□□□□ -0.53
CPSF7-225ENST00000545934 ZNF90Q03938 601 aa11.72□□□□□ -0.53
CPSF7-225ENST00000545934 SURF2Q15527 256 aaPredicted RBP11.72□□□□□ -0.53
CPSF7-225ENST00000545934 STEAP1BQ6NZ63 245 aa11.72□□□□□ -0.53
CPSF7-225ENST00000545934 GSG1LQ6UXU4 331 aa11.72□□□□□ -0.53
CPSF7-225ENST00000545934 COQ8AQ8NI60 647 aa11.72□□□□□ -0.53
CPSF7-225ENST00000545934 PBDC1Q9BVG4 233 aa11.72□□□□□ -0.53
CPSF7-225ENST00000545934 FUNDC2Q9BWH2 189 aa11.72□□□□□ -0.53
CPSF7-225ENST00000545934 EXTL2Q9UBQ6 330 aa11.72□□□□□ -0.53
CPSF7-225ENST00000545934 TMED3Q9Y3Q3 217 aa11.72□□□□□ -0.53
CPSF7-225ENST00000545934 U3KQ87 197 aa11.72□□□□□ -0.53
CPSF7-225ENST00000545934 HERC1Q15751 4861 aa11.71□□□□□ -0.53
CPSF7-225ENST00000545934 A0A087WXM4 84 aa11.71□□□□□ -0.53
CPSF7-225ENST00000545934 FAM25AB3EWG3 89 aa11.71□□□□□ -0.53
CPSF7-225ENST00000545934 FAM25CB3EWG5 89 aa11.71□□□□□ -0.53
CPSF7-225ENST00000545934 FAM25GB3EWG6 89 aa11.71□□□□□ -0.53
CPSF7-225ENST00000545934 TNFAIP8O95379 198 aa11.71□□□□□ -0.53
CPSF7-225ENST00000545934 GPR107Q5VW38 600 aa11.71□□□□□ -0.53
CPSF7-225ENST00000545934 EBLN2Q6P2I7 272 aa11.71□□□□□ -0.53
CPSF7-225ENST00000545934 C6orf223Q8N319 242 aa11.71□□□□□ -0.53
CPSF7-225ENST00000545934 C20orf173Q96LM9 149 aa11.71□□□□□ -0.53
CPSF7-225ENST00000545934 IGF2BP2-AS1Q96M15 143 aa11.71□□□□□ -0.53
CPSF7-225ENST00000545934 C17orf77Q96MU5 243 aa11.71□□□□□ -0.53
CPSF7-225ENST00000545934 C7orf50Q9BRJ6 194 aaKnown RBP11.71□□□□□ -0.53
CPSF7-225ENST00000545934 HSPB7Q9UBY9 170 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms