RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 C5orf30Q96GV9 206 aa9.72□□□□□ -0.85
CIT-217ENST00000545913 LYZL4Q96KX0 146 aa9.72□□□□□ -0.85
CIT-217ENST00000545913 VGLL1Q99990 258 aa9.72□□□□□ -0.85
CIT-217ENST00000545913 IGHV1-18A0A0C4DH31 117 aa9.72□□□□□ -0.85
CIT-217ENST00000545913 F8VVB4 439 aa9.72□□□□□ -0.85
CIT-217ENST00000545913 F8VWA3 439 aa9.72□□□□□ -0.85
CIT-217ENST00000545913 SNAI2O43623 268 aa9.72□□□□□ -0.85
CIT-217ENST00000545913 CD5P06127 495 aa9.72□□□□□ -0.85
CIT-217ENST00000545913 CDKN1AP38936 164 aa9.72□□□□□ -0.85
CIT-217ENST00000545913 FAM89BQ8N5H3 189 aa9.72□□□□□ -0.85
CIT-217ENST00000545913 CMC4P56277 68 aaPredicted RBP9.72□□□□□ -0.85
CIT-217ENST00000545913 ST6GALNAC6Q969X2 333 aa9.72□□□□□ -0.85
CIT-217ENST00000545913 GSN-AS1Q9NRJ2 163 aa9.72□□□□□ -0.85
CIT-217ENST00000545913 LINC00469Q8N7U9 141 aa9.72□□□□□ -0.85
CIT-217ENST00000545913 OVOL1O14753 267 aa9.72□□□□□ -0.85
CIT-217ENST00000545913 NR2C2APQ86WQ0 139 aa9.72□□□□□ -0.85
CIT-217ENST00000545913 TMEM86BQ8N661 226 aa9.72□□□□□ -0.85
CIT-217ENST00000545913 TRGV4A0A0C4DH28 118 aa9.71□□□□□ -0.85
CIT-217ENST00000545913 ZNF585BQ52M93 769 aa9.71□□□□□ -0.85
CIT-217ENST00000545913 C11orf68Q9H3H3 251 aaKnown RBP9.71□□□□□ -0.85
CIT-217ENST00000545913 ZFP36L1Q07352 338 aaKnown RBP9.71□□□□□ -0.85
CIT-217ENST00000545913 PHLDA1Q8WV24 401 aaPredicted RBP9.71□□□□□ -0.85
CIT-217ENST00000545913 CLDN16Q9Y5I7 305 aa9.71□□□□□ -0.85
CIT-217ENST00000545913 IL18BPO95998 194 aa9.71□□□□□ -0.85
CIT-217ENST00000545913 IGKV1-9A0A0C4DH69 117 aa9.71□□□□□ -0.86
CIT-217ENST00000545913 PAX2Q02962 417 aa9.71□□□□□ -0.86
CIT-217ENST00000545913 METRNQ9UJH8 293 aa9.71□□□□□ -0.86
CIT-217ENST00000545913 IGKV3D-20A0A0C4DH25 116 aa9.71□□□□□ -0.86
CIT-217ENST00000545913 OR9G9P0C7N8 305 aa9.71□□□□□ -0.86
CIT-217ENST00000545913 TIMP3P35625 211 aa9.71□□□□□ -0.86
CIT-217ENST00000545913 PSG8Q9UQ74 426 aa9.71□□□□□ -0.86
CIT-217ENST00000545913 BTCP35070 178 aa9.7□□□□□ -0.86
CIT-217ENST00000545913 LDLRAD4O15165 306 aa9.7□□□□□ -0.86
CIT-217ENST00000545913 SSBP4Q9BWG4 385 aaPredicted RBP9.7□□□□□ -0.86
CIT-217ENST00000545913 ALPK3Q96L96 1907 aa9.7□□□□□ -0.86
CIT-217ENST00000545913 TIMM23O14925 209 aa9.7□□□□□ -0.86
CIT-217ENST00000545913 TMEM95Q3KNT9 176 aa9.7□□□□□ -0.86
CIT-217ENST00000545913 TSKUQ8WUA8 353 aa9.7□□□□□ -0.86
CIT-217ENST00000545913 MBNL3Q9NUK0 354 aaKnown RBP9.7□□□□□ -0.86
CIT-217ENST00000545913 TRAV40A0A0B4J280 105 aa9.7□□□□□ -0.86
CIT-217ENST00000545913 LAGE3Q14657 143 aa9.7□□□□□ -0.86
CIT-217ENST00000545913 VWCEQ96DN2 955 aa9.7□□□□□ -0.86
CIT-217ENST00000545913 TMEM242Q9NWH2 141 aa9.7□□□□□ -0.86
CIT-217ENST00000545913 TBX6O95947 436 aaPredicted RBP9.7□□□□□ -0.86
CIT-217ENST00000545913 CD28P10747 220 aa9.7□□□□□ -0.86
CIT-217ENST00000545913 FLVCR1-AS1Q8TAF5 88 aa9.7□□□□□ -0.86
CIT-217ENST00000545913 CHTOPQ9Y3Y2 248 aaKnown RBP9.7□□□□□ -0.86
CIT-217ENST00000545913 TRAV8-2A0A0B4J237 113 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 SLC25A15Q9Y619 301 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 TRBV7-1A0A0A6YYK4 115 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 RASL11AQ6T310 242 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 IGHV2-26A0A0B4J1V2 119 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 IGKCP01834 107 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 PYYP10082 97 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 LAMTOR2Q9Y2Q5 125 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 CD24P25063 80 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 MINOS1Q5TGZ0 78 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 SPACA3Q8IXA5 215 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 MINOS1-NBL1R4GNA1 71 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 TRAV9-2A0A087WT02 112 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 SRRM5B3KS81 715 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 EVI2AP22794 236 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 PCP4P48539 62 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 C15orf32Q32M92 178 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 SLC25A2Q9BXI2 301 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 IGHV1-46P01743 117 aa9.69□□□□□ -0.86
CIT-217ENST00000545913 A0A0A6YYD4 124 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 ID3Q02535 119 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 SPSB3Q6PJ21 355 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 ADARB2-AS1A8MUL3 147 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 IGHV4-39P01824 125 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 C1QTNF9P0C862 333 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 MORN3Q6PF18 240 aaPredicted RBP9.68□□□□□ -0.86
CIT-217ENST00000545913 TMEM105Q8N8V8 129 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 ZNF815PA8K554 130 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 HOXA3O43365 443 aaPredicted RBP9.68□□□□□ -0.86
CIT-217ENST00000545913 ERVK11-1P61568 191 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 SLC25A48Q6ZT89 311 aaKnown RBP9.68□□□□□ -0.86
CIT-217ENST00000545913 DEPPQ9NTK1 212 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 PTPRQQ9UMZ3 2332 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 LY6G6FQ5SQ64 297 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 CKS1BP61024 79 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 ST6GALNAC3Q8NDV1 305 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 PRADC1Q9BSG0 188 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 LILRA1O75019 489 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 C20orf204Q6ZNR8 217 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 GGNQ86UU5 652 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 DERL1Q9BUN8 251 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 TRAV41A0A0B4J266 112 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 PRB3Q04118 309 aaPredicted RBP9.68□□□□□ -0.86
CIT-217ENST00000545913 MBD3L1Q8WWY6 194 aa9.68□□□□□ -0.86
CIT-217ENST00000545913 NHP2Q9NX24 153 aaKnown RBP9.68□□□□□ -0.86
CIT-217ENST00000545913 PCNX3Q9H6A9 2034 aa9.67□□□□□ -0.86
CIT-217ENST00000545913 HIST1H2BKO60814 126 aa9.67□□□□□ -0.86
CIT-217ENST00000545913 HIST1H2BJP06899 126 aa9.67□□□□□ -0.86
CIT-217ENST00000545913 HIST1H2BOP23527 126 aa9.67□□□□□ -0.86
CIT-217ENST00000545913 HIST1H2BBP33778 126 aa9.67□□□□□ -0.86
CIT-217ENST00000545913 HIST1H2BDP58876 126 aa9.67□□□□□ -0.86
CIT-217ENST00000545913 HIST1H2BCP62807 126 aa9.67□□□□□ -0.86
CIT-217ENST00000545913 HIST2H2BEQ16778 126 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms