RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 MFAP2P55001 183 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 PLP1P60201 277 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 C1orf100Q5SVJ3 147 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 C1QL2Q7Z5L3 287 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 TMEM256Q8N2U0 113 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 KIR2DL4Q99706 377 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 ZNF319Q9P2F9 582 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 DNAH14Q0VDD8 3507 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 TRGV4A0A0C4DH28 118 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 PSCAO43653 123 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 PDE6DO43924 150 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 KIAA2026Q5HYC2 2103 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 VAX1Q5SQQ9 334 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-218ENST00000545889 GTSF1LQ9H1H1 148 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 RBKSQ9H477 322 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 A0A1B0GUS0 222 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 IGHG3P01860 377 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 GATA3P23771 443 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 DTX2Q86UW9 622 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 CKS2P33552 79 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 ERVK11-1P61568 191 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 RPS11P62280 158 aaKnown RBP eCLIP7.13□□□□□ -1.27
CLIP1-218ENST00000545889 IGF2-ASQ6U949 168 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 OR10W1Q8NGF6 305 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 GPR146Q96CH1 333 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 GFI1Q99684 422 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 TRAV41A0A0B4J266 112 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 C5orf63A6NC05 138 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 FAM90A26D6RGX4 464 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 ETV2O00321 342 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-218ENST00000545889 DUSP14O95147 198 aaKnown RBP7.13□□□□□ -1.27
CLIP1-218ENST00000545889 PRSS2P07478 247 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 SERF2P84101 59 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 ZNF585BQ52M93 769 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 PAPPA-AS1Q5QFB9 102 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 ZNF329Q86UD4 541 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 TMEM252Q8N6L7 170 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 RNASEH2CQ8TDP1 164 aaKnown RBP7.13□□□□□ -1.27
CLIP1-218ENST00000545889 GATAD1Q8WUU5 269 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 NAT8Q9UHE5 227 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 NCOA6Q14686 2063 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-218ENST00000545889 TRBV5-5A0A0J9YX44 114 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 PSPNO60542 156 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 HSPB1P04792 205 aaKnown RBP7.13□□□□□ -1.27
CLIP1-218ENST00000545889 CRYGSP22914 178 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 RPS20P60866 119 aaKnown RBP7.13□□□□□ -1.27
CLIP1-218ENST00000545889 MEIG1Q5JSS6 88 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 GOLT1AQ6ZVE7 132 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 RNF166Q96A37 237 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-218ENST00000545889 SMDT1Q9H4I9 107 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 RFNGQ9Y644 331 aa7.13□□□□□ -1.27
CLIP1-218ENST00000545889 J3QR89 54 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 PPP1R17O96001 155 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 CRPP02741 224 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 OR9G9P0C7N8 305 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 ZNF415Q09FC8 603 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 IGFL3Q6UXB1 125 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 BEX4Q9NWD9 120 aaPredicted RBP7.12□□□□□ -1.27
CLIP1-218ENST00000545889 SLC25A15Q9Y619 301 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 COX11Q9Y6N1 276 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 M0R381 172 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 ICAM4Q14773 271 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 TDRG1Q3Y452 100 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 WDR82Q6UXN9 313 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 VMO1Q7Z5L0 202 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 PIP4P2Q8N4L2 257 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 ST6GALNAC6Q969X2 333 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 DPRXA6NFQ7 191 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 NABP1Q96AH0 204 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 SGK494Q96LW2 274 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 IL36RNQ9UBH0 155 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 A0A087WX48 190 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 LOC389332A0A1B0GUA5 103 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 C22orf46C9J442 243 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 J3QRE1 110 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 TMEM177Q53S58 311 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 PLSCR2Q9NRY7 297 aa7.12□□□□□ -1.27
CLIP1-218ENST00000545889 GAGE12BA1L429 117 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 CD55P08174 381 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 ASPHD2Q6ICH7 369 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 RPUSD1Q9UJJ7 312 aaKnown RBP7.11□□□□□ -1.27
CLIP1-218ENST00000545889 SOX21Q9Y651 276 aaPredicted RBP7.11□□□□□ -1.27
CLIP1-218ENST00000545889 ZNF292O60281 2723 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 MINOS1Q5TGZ0 78 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 MBNL2Q5VZF2 373 aaKnown RBP7.11□□□□□ -1.27
CLIP1-218ENST00000545889 OR8A1Q8NGG7 326 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 NABP2Q9BQ15 211 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 DERL1Q9BUN8 251 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 C5orf66Q9H5L9 145 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 MINOS1-NBL1R4GNA1 71 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.11□□□□□ -1.27
CLIP1-218ENST00000545889 M0R2Z0 102 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 CA2P00918 260 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 GATA4P43694 442 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 KLRD1Q13241 179 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 LYRM7Q5U5X0 104 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 PAQR4Q8N4S7 273 aaPredicted RBP7.11□□□□□ -1.27
CLIP1-218ENST00000545889 SGMS2Q8NHU3 365 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 RNF138Q8WVD3 245 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms