RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 OVOL2Q9BRP0 275 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 TMEM231Q9H6L2 316 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 MAP6D1Q9H9H5 199 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 RETNQ9HD89 108 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 IGKV3-7A0A075B6H7 116 aa8.43□□□□□ -1.06
YBX3-216ENST00000544622 TRAV6A0A075B6T7 132 aa8.43□□□□□ -1.06
YBX3-216ENST00000544622 K7EQG2 157 aa8.43□□□□□ -1.06
YBX3-216ENST00000544622 HNRNPCP07910 306 aaKnown RBP eCLIP8.43□□□□□ -1.06
YBX3-216ENST00000544622 TFPI2P48307 235 aa8.43□□□□□ -1.06
YBX3-216ENST00000544622 ZNF124Q15973 351 aa8.43□□□□□ -1.06
YBX3-216ENST00000544622 SPANXN5Q5MJ07 72 aa8.43□□□□□ -1.06
YBX3-216ENST00000544622 Q6ZWC4 215 aa8.43□□□□□ -1.06
YBX3-216ENST00000544622 WFDC3Q8IUB2 231 aa8.43□□□□□ -1.06
YBX3-216ENST00000544622 FAM24BQ8N5W8 94 aa8.43□□□□□ -1.06
YBX3-216ENST00000544622 STPG3Q8N7X2 389 aa8.43□□□□□ -1.06
YBX3-216ENST00000544622 OR51G1Q8NGK1 321 aa8.43□□□□□ -1.06
YBX3-216ENST00000544622 ZNF431Q8TF32 576 aaPredicted RBP8.43□□□□□ -1.06
YBX3-216ENST00000544622 RNF125Q96EQ8 232 aa8.43□□□□□ -1.06
YBX3-216ENST00000544622 SMIM8Q96KF7 97 aa8.43□□□□□ -1.06
YBX3-216ENST00000544622 TRGV9Q99603 122 aa8.43□□□□□ -1.06
YBX3-216ENST00000544622 NUDT15Q9NV35 164 aa8.43□□□□□ -1.06
YBX3-216ENST00000544622 UPK1BO75841 260 aa8.42□□□□□ -1.06
YBX3-216ENST00000544622 IL15RAQ13261 267 aa8.42□□□□□ -1.06
YBX3-216ENST00000544622 ZNF846Q147U1 533 aa8.42□□□□□ -1.06
YBX3-216ENST00000544622 IAH1Q2TAA2 248 aaPredicted RBP8.42□□□□□ -1.06
YBX3-216ENST00000544622 CASC10Q5T4H9 136 aa8.42□□□□□ -1.06
YBX3-216ENST00000544622 TMEM14EPQ6UXP3 125 aa8.42□□□□□ -1.06
YBX3-216ENST00000544622 ZBTB8BQ8NAP8 495 aaPredicted RBP8.42□□□□□ -1.06
YBX3-216ENST00000544622 GRAMD2BQ96HH9 432 aa8.42□□□□□ -1.06
YBX3-216ENST00000544622 SLC35E1Q96K37 410 aa8.42□□□□□ -1.06
YBX3-216ENST00000544622 WDR12Q9GZL7 423 aaKnown RBP8.42□□□□□ -1.06
YBX3-216ENST00000544622 BATF3Q9NR55 127 aa8.42□□□□□ -1.06
YBX3-216ENST00000544622 STRAPQ9Y3F4 350 aaKnown RBP8.42□□□□□ -1.06
YBX3-216ENST00000544622 RYR2Q92736 4967 aa8.41□□□□□ -1.06
YBX3-216ENST00000544622 FAM240BA0A1B0GVZ2 78 aa8.41□□□□□ -1.06
YBX3-216ENST00000544622 ZFP92A6NM28 416 aa8.41□□□□□ -1.06
YBX3-216ENST00000544622 SNRPGP15A8MWD9 76 aa8.41□□□□□ -1.06
YBX3-216ENST00000544622 H3BP45 60 aa8.41□□□□□ -1.06
YBX3-216ENST00000544622 DNASE2O00115 360 aaPredicted RBP8.41□□□□□ -1.06
YBX3-216ENST00000544622 UBE2CO00762 179 aa8.41□□□□□ -1.06
YBX3-216ENST00000544622 MBPP02686 304 aaPredicted RBP8.41□□□□□ -1.06
YBX3-216ENST00000544622 H2AFB2P0C5Z0 115 aa8.41□□□□□ -1.06
YBX3-216ENST00000544622 AP2S1P53680 142 aaPredicted RBP8.41□□□□□ -1.06
YBX3-216ENST00000544622 APOC4P55056 127 aa8.41□□□□□ -1.06
YBX3-216ENST00000544622 TAS2R30P59541 319 aa8.41□□□□□ -1.06
YBX3-216ENST00000544622 OR8G2PQ6IF36 304 aa8.41□□□□□ -1.06
YBX3-216ENST00000544622 TMEM182Q6ZP80 229 aaPredicted RBP8.41□□□□□ -1.06
YBX3-216ENST00000544622 NARS2Q96I59 477 aaKnown RBP8.41□□□□□ -1.06
YBX3-216ENST00000544622 RAB40CQ96S21 281 aa8.41□□□□□ -1.06
YBX3-216ENST00000544622 SEC22CQ9BRL7 303 aa8.41□□□□□ -1.06
YBX3-216ENST00000544622 PSENENQ9NZ42 101 aa8.41□□□□□ -1.06
YBX3-216ENST00000544622 RABAC1Q9UI14 185 aa8.41□□□□□ -1.06
YBX3-216ENST00000544622 TP53TG1Q9Y2A0 90 aa8.41□□□□□ -1.06
YBX3-216ENST00000544622 RCL1Q9Y2P8 373 aaKnown RBP8.41□□□□□ -1.06
YBX3-216ENST00000544622 C7orf66A4D0T2 115 aa8.4□□□□□ -1.06
YBX3-216ENST00000544622 HELTA6NFD8 242 aa8.4□□□□□ -1.06
YBX3-216ENST00000544622 TSC22D2O75157 780 aa8.4□□□□□ -1.06
YBX3-216ENST00000544622 IL5P05113 134 aa8.4□□□□□ -1.06
YBX3-216ENST00000544622 EIF2B2P49770 351 aaKnown RBP8.4□□□□□ -1.06
YBX3-216ENST00000544622 DEFB131AP59861 70 aa8.4□□□□□ -1.06
YBX3-216ENST00000544622 RPL11P62913 178 aaKnown RBP8.4□□□□□ -1.06
YBX3-216ENST00000544622 MZT2BQ6NZ67 158 aa8.4□□□□□ -1.06
YBX3-216ENST00000544622 ACOT7LQ6ZUV0 252 aa8.4□□□□□ -1.06
YBX3-216ENST00000544622 TMEM144Q7Z5S9 345 aa8.4□□□□□ -1.06
YBX3-216ENST00000544622 C12orf45Q8N5I9 185 aaPredicted RBP8.4□□□□□ -1.06
YBX3-216ENST00000544622 RNF183Q96D59 192 aa8.4□□□□□ -1.06
YBX3-216ENST00000544622 C11orf1Q9H5F2 150 aa8.4□□□□□ -1.06
YBX3-216ENST00000544622 SEPSECSQ9HD40 501 aaKnown RBP8.4□□□□□ -1.06
YBX3-216ENST00000544622 TENM2Q9NT68 2774 aa8.4□□□□□ -1.06
YBX3-216ENST00000544622 FNDC10F2Z333 226 aa8.39□□□□□ -1.07
YBX3-216ENST00000544622 CCSO14618 274 aa8.39□□□□□ -1.07
YBX3-216ENST00000544622 SSSCA1O60232 199 aa8.39□□□□□ -1.07
YBX3-216ENST00000544622 CCNKO75909 580 aa8.39□□□□□ -1.07
YBX3-216ENST00000544622 CFDP00746 253 aaPredicted RBP8.39□□□□□ -1.07
YBX3-216ENST00000544622 FABP1P07148 127 aa8.39□□□□□ -1.07
YBX3-216ENST00000544622 C1orf194Q5T5A4 169 aa8.39□□□□□ -1.07
YBX3-216ENST00000544622 LEMD1Q68G75 181 aa8.39□□□□□ -1.07
YBX3-216ENST00000544622 STXBP6Q8NFX7 210 aa8.39□□□□□ -1.07
YBX3-216ENST00000544622 CSTL1Q9H114 145 aa8.39□□□□□ -1.07
YBX3-216ENST00000544622 NRN1Q9NPD7 142 aa8.39□□□□□ -1.07
YBX3-216ENST00000544622 GSKIPQ9P0R6 139 aa8.39□□□□□ -1.07
YBX3-216ENST00000544622 PAIP2BQ9ULR5 123 aaKnown RBP8.39□□□□□ -1.07
YBX3-216ENST00000544622 SLC45A2Q9UMX9 530 aa8.39□□□□□ -1.07
YBX3-216ENST00000544622 DNAH1Q9P2D7 4330 aa8.39□□□□□ -1.07
YBX3-216ENST00000544622 SPRY2O43597 315 aa8.38□□□□□ -1.07
YBX3-216ENST00000544622 LYL1P12980 280 aa8.38□□□□□ -1.07
YBX3-216ENST00000544622 RPL35AP18077 110 aaKnown RBP8.38□□□□□ -1.07
YBX3-216ENST00000544622 GATA2P23769 480 aaPredicted RBP8.38□□□□□ -1.07
YBX3-216ENST00000544622 ARL16Q0P5N6 197 aa8.38□□□□□ -1.07
YBX3-216ENST00000544622 DEFB135Q30KP9 77 aa8.38□□□□□ -1.07
YBX3-216ENST00000544622 SIGLEC15Q6ZMC9 328 aa8.38□□□□□ -1.07
YBX3-216ENST00000544622 NRARPQ7Z6K4 114 aa8.38□□□□□ -1.07
YBX3-216ENST00000544622 C2orf50Q96LR7 162 aa8.38□□□□□ -1.07
YBX3-216ENST00000544622 C17orf77Q96MU5 243 aa8.38□□□□□ -1.07
YBX3-216ENST00000544622 HYDINQ4G0P3 5121 aa8.37□□□□□ -1.07
YBX3-216ENST00000544622 K7EPK0 472 aa8.37□□□□□ -1.07
YBX3-216ENST00000544622 SOCS3O14543 225 aa8.37□□□□□ -1.07
YBX3-216ENST00000544622 GIG44P09565 113 aaPredicted RBP8.37□□□□□ -1.07
YBX3-216ENST00000544622 METTL15P1P0C7V9 234 aa8.37□□□□□ -1.07
YBX3-216ENST00000544622 NUP62P37198 522 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms