RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 METTL26Q96S19 204 aa11.01□□□□□ -0.65
TNFRSF1A-216ENST00000543995 SMIM3Q9BZL3 60 aa11.01□□□□□ -0.65
TNFRSF1A-216ENST00000543995 MRPL27Q9P0M9 148 aaKnown RBP11.01□□□□□ -0.65
TNFRSF1A-216ENST00000543995 K7EMT4 169 aa11□□□□□ -0.65
TNFRSF1A-216ENST00000543995 LYZP61626 148 aa11□□□□□ -0.65
TNFRSF1A-216ENST00000543995 RAB31Q13636 194 aa11□□□□□ -0.65
TNFRSF1A-216ENST00000543995 VWC2Q2TAL6 325 aa11□□□□□ -0.65
TNFRSF1A-216ENST00000543995 CYP2G1PQ6ZSU1 146 aa11□□□□□ -0.65
TNFRSF1A-216ENST00000543995 MARC2Q969Z3 335 aa11□□□□□ -0.65
TNFRSF1A-216ENST00000543995 PBDC1Q9BVG4 233 aa11□□□□□ -0.65
TNFRSF1A-216ENST00000543995 G3V3Q6 166 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 AGPAT2O15120 278 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 FGF7P21781 194 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 NPPCP23582 126 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 GATA2P23769 480 aaPredicted RBP10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 AP2S1P53680 142 aaPredicted RBP10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 SAMD5Q5TGI4 173 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 BTNL8Q6UX41 500 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 AKAP14Q86UN6 197 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 BPIFCQ8NFQ6 507 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 RNF125Q96EQ8 232 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 AQP10Q96PS8 301 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 ATP5SQ99766 215 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 NEURL2Q9BR09 285 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 SIGLEC8Q9NYZ4 499 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 WDR83OSQ9Y284 106 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 LSM4Q9Y4Z0 139 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 VWFP04275 2813 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 IGHV3-49A0A0A0MS15 119 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 ARPC5O15511 151 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 DFFBO76075 338 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 CFDP00746 253 aaPredicted RBP10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 SELENOTP62341 195 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 USF2Q15853 346 aaPredicted RBP10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 NARS2Q96I59 477 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 MGST2Q99735 147 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 TNFSF18Q9UNG2 199 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 SELENOKQ9Y6D0 94 aa10.99□□□□□ -0.65
TNFRSF1A-216ENST00000543995 IGHV3OR16-13A0A075B7E8 117 aa10.98□□□□□ -0.65
TNFRSF1A-216ENST00000543995 IGHV3-74A0A0B4J1X5 117 aa10.98□□□□□ -0.65
TNFRSF1A-216ENST00000543995 IGHV7-4-1A0A0J9YVY3 117 aa10.98□□□□□ -0.65
TNFRSF1A-216ENST00000543995 WI2-2373I1.2A0A1W2PRP0 233 aa10.98□□□□□ -0.65
TNFRSF1A-216ENST00000543995 IFNA5P01569 189 aa10.98□□□□□ -0.65
TNFRSF1A-216ENST00000543995 LINC00869P0C866 280 aa10.98□□□□□ -0.65
TNFRSF1A-216ENST00000543995 BMI1P35226 326 aa10.98□□□□□ -0.65
TNFRSF1A-216ENST00000543995 CAMLGP49069 296 aa10.98□□□□□ -0.65
TNFRSF1A-216ENST00000543995 ADAMTSL5Q6ZMM2 481 aa10.98□□□□□ -0.65
TNFRSF1A-216ENST00000543995 TMEM182Q6ZP80 229 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF1A-216ENST00000543995 RHPN1-AS1Q9BWJ2 59 aa10.98□□□□□ -0.65
TNFRSF1A-216ENST00000543995 TECRQ9NZ01 308 aaKnown RBP10.98□□□□□ -0.65
TNFRSF1A-216ENST00000543995 RABAC1Q9UI14 185 aa10.98□□□□□ -0.65
TNFRSF1A-216ENST00000543995 IGHV3-66A0A0C4DH42 116 aa10.97□□□□□ -0.65
TNFRSF1A-216ENST00000543995 MPDU1O75352 247 aa10.97□□□□□ -0.65
TNFRSF1A-216ENST00000543995 IGLV1-51P01701 117 aa10.97□□□□□ -0.65
TNFRSF1A-216ENST00000543995 HNRNPCP07910 306 aaKnown RBP eCLIP10.97□□□□□ -0.65
TNFRSF1A-216ENST00000543995 C8orf88P0DMB2 117 aa10.97□□□□□ -0.65
TNFRSF1A-216ENST00000543995 OR1B1Q8NGR6 318 aa10.97□□□□□ -0.65
TNFRSF1A-216ENST00000543995 SCGB1C1Q8TD33 95 aa10.97□□□□□ -0.65
TNFRSF1A-216ENST00000543995 FBXL17Q9UF56 701 aa10.97□□□□□ -0.65
TNFRSF1A-216ENST00000543995 MLXQ9UH92 298 aa10.97□□□□□ -0.65
TNFRSF1A-216ENST00000543995 SMPXQ9UHP9 88 aa10.97□□□□□ -0.65
TNFRSF1A-216ENST00000543995 A0A1W2PS18 150 aa10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 RNF222A6NCQ9 220 aa10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 CHEK1O14757 476 aa10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 WIPF1O43516 503 aa10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 APOHP02749 345 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 ORM2P19652 201 aa10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 CRYBB3P26998 211 aa10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 EIF2B2P49770 351 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 DEFB114Q30KQ6 69 aa10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 CD300EQ496F6 205 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 TCTE3Q8IZS6 198 aa10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 PPP1R14BQ96C90 147 aa10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 GGTLC1Q9BX51 225 aa10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 WDR61Q9GZS3 305 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 MFFQ9GZY8 342 aa10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 TMEM231Q9H6L2 316 aa10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 SLC45A2Q9UMX9 530 aa10.96□□□□□ -0.65
TNFRSF1A-216ENST00000543995 LCN12Q6JVE5 192 aa10.95□□□□□ -0.66
TNFRSF1A-216ENST00000543995 Q6ZRG5 221 aa10.95□□□□□ -0.66
TNFRSF1A-216ENST00000543995 ZNF709Q8N972 641 aa10.95□□□□□ -0.66
TNFRSF1A-216ENST00000543995 OR11H4Q8NGC9 324 aa10.95□□□□□ -0.66
TNFRSF1A-216ENST00000543995 ST8SIA2Q92186 375 aa10.95□□□□□ -0.66
TNFRSF1A-216ENST00000543995 GRAMD2BQ96HH9 432 aa10.95□□□□□ -0.66
TNFRSF1A-216ENST00000543995 NPCDR1Q9BY65 106 aa10.95□□□□□ -0.66
TNFRSF1A-216ENST00000543995 ARL6Q9H0F7 186 aa10.95□□□□□ -0.66
TNFRSF1A-216ENST00000543995 WFDC1Q9HC57 220 aa10.95□□□□□ -0.66
TNFRSF1A-216ENST00000543995 DOK5Q9P104 306 aa10.95□□□□□ -0.66
TNFRSF1A-216ENST00000543995 ZMAT5Q9UDW3 170 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-216ENST00000543995 PFDN2Q9UHV9 154 aa10.95□□□□□ -0.66
TNFRSF1A-216ENST00000543995 HMSDA8MTL9 139 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 C17orf112F2Z3M2 114 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 OR5G3P0C626 314 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 ZNF266Q14584 549 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 MIC13Q5XKP0 118 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 RBPMS2Q6ZRY4 209 aaKnown RBP10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 STPG3Q8N7X2 389 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 OR2K2Q8NGT1 345 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 RNF2Q99496 336 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 NOTCH3Q9UM47 2321 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms