RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 KLF9Q13886 244 aaPredicted RBP9.55□□□□□ -0.88
RTN3-213ENST00000543552 USF2Q15853 346 aaPredicted RBP9.55□□□□□ -0.88
RTN3-213ENST00000543552 OR8G2PQ6IF36 304 aa9.55□□□□□ -0.88
RTN3-213ENST00000543552 OR51G1Q8NGK1 321 aa9.55□□□□□ -0.88
RTN3-213ENST00000543552 OR1S1Q8NH92 325 aa9.55□□□□□ -0.88
RTN3-213ENST00000543552 TMEM170AQ8WVE7 144 aa9.55□□□□□ -0.88
RTN3-213ENST00000543552 RNF125Q96EQ8 232 aa9.55□□□□□ -0.88
RTN3-213ENST00000543552 SLC35E1Q96K37 410 aa9.55□□□□□ -0.88
RTN3-213ENST00000543552 RAB40CQ96S21 281 aa9.55□□□□□ -0.88
RTN3-213ENST00000543552 TBC1D24Q9ULP9 559 aa9.55□□□□□ -0.88
RTN3-213ENST00000543552 ZFP92A6NM28 416 aa9.54□□□□□ -0.88
RTN3-213ENST00000543552 BUB3O43684 328 aa9.54□□□□□ -0.88
RTN3-213ENST00000543552 PSG1P11464 419 aa9.54□□□□□ -0.88
RTN3-213ENST00000543552 C4BPBP20851 252 aa9.54□□□□□ -0.88
RTN3-213ENST00000543552 GPX4P36969 197 aaPredicted RBP9.54□□□□□ -0.88
RTN3-213ENST00000543552 RAB11AP62491 216 aa9.54□□□□□ -0.88
RTN3-213ENST00000543552 LYZL2Q7Z4W2 148 aa9.54□□□□□ -0.88
RTN3-213ENST00000543552 MCFD2Q8NI22 146 aa9.54□□□□□ -0.88
RTN3-213ENST00000543552 SLIRPQ9GZT3 109 aaKnown RBP9.54□□□□□ -0.88
RTN3-213ENST00000543552 RBKSQ9H477 322 aa9.54□□□□□ -0.88
RTN3-213ENST00000543552 H3BMQ9 156 aa9.53□□□□□ -0.88
RTN3-213ENST00000543552 GIG44P09565 113 aaPredicted RBP9.53□□□□□ -0.88
RTN3-213ENST00000543552 TNFSF8P32971 234 aa9.53□□□□□ -0.88
RTN3-213ENST00000543552 SUPT4H1P63272 117 aaKnown RBP9.53□□□□□ -0.88
RTN3-213ENST00000543552 TMEM128Q5BJH2 165 aa9.53□□□□□ -0.88
RTN3-213ENST00000543552 SAMD13Q5VXD3 122 aa9.53□□□□□ -0.88
RTN3-213ENST00000543552 RPP25LQ8N5L8 163 aaKnown RBP9.53□□□□□ -0.88
RTN3-213ENST00000543552 DEDD2Q8WXF8 326 aa9.53□□□□□ -0.88
RTN3-213ENST00000543552 PBDC1Q9BVG4 233 aa9.53□□□□□ -0.88
RTN3-213ENST00000543552 PRR13Q9NZ81 148 aa9.53□□□□□ -0.88
RTN3-213ENST00000543552 TRAV10A0A0B4J240 114 aa9.52□□□□□ -0.89
RTN3-213ENST00000543552 IGLL5B9A064 214 aa9.52□□□□□ -0.89
RTN3-213ENST00000543552 MED6O75586 246 aa9.52□□□□□ -0.89
RTN3-213ENST00000543552 DEDDO75618 318 aa9.52□□□□□ -0.89
RTN3-213ENST00000543552 ID1P41134 155 aa9.52□□□□□ -0.89
RTN3-213ENST00000543552 NKX2-1P43699 371 aaPredicted RBP9.52□□□□□ -0.89
RTN3-213ENST00000543552 RPP30P78346 268 aaKnown RBP9.52□□□□□ -0.89
RTN3-213ENST00000543552 C1orf194Q5T5A4 169 aa9.52□□□□□ -0.89
RTN3-213ENST00000543552 TMED4Q7Z7H5 227 aa9.52□□□□□ -0.89
RTN3-213ENST00000543552 TOMM5Q8N4H5 51 aa9.52□□□□□ -0.89
RTN3-213ENST00000543552 SOSTQ9BQB4 213 aa9.52□□□□□ -0.89
RTN3-213ENST00000543552 RBMY1A1P0DJD3 496 aaKnown RBP9.51□□□□□ -0.89
RTN3-213ENST00000543552 RBMY1CP0DJD4 496 aa9.51□□□□□ -0.89
RTN3-213ENST00000543552 SLC25A6P12236 298 aa9.51□□□□□ -0.89
RTN3-213ENST00000543552 HLA-DRB4P13762 266 aa9.51□□□□□ -0.89
RTN3-213ENST00000543552 VAMP1P23763 118 aa9.51□□□□□ -0.89
RTN3-213ENST00000543552 HLA-DMBP28068 263 aa9.51□□□□□ -0.89
RTN3-213ENST00000543552 S100A5P33763 92 aa9.51□□□□□ -0.89
RTN3-213ENST00000543552 GAMTQ14353 236 aa9.51□□□□□ -0.89
RTN3-213ENST00000543552 RBMY1FQ15415 496 aaKnown RBP9.51□□□□□ -0.89
RTN3-213ENST00000543552 PYDC2Q56P42 97 aa9.51□□□□□ -0.89
RTN3-213ENST00000543552 CSNK1G2-AS1Q8NCQ2 148 aa9.51□□□□□ -0.89
RTN3-213ENST00000543552 PPP1R14BQ96C90 147 aa9.51□□□□□ -0.89
RTN3-213ENST00000543552 CIB3Q96Q77 187 aaPredicted RBP9.51□□□□□ -0.89
RTN3-213ENST00000543552 SLC25A21Q9BQT8 299 aaPredicted RBP9.51□□□□□ -0.89
RTN3-213ENST00000543552 CLEC5AQ9NY25 188 aa9.51□□□□□ -0.89
RTN3-213ENST00000543552 HLA-DRB4X5D2U9 266 aa9.51□□□□□ -0.89
RTN3-213ENST00000543552 X6R8D5 127 aa9.51□□□□□ -0.89
RTN3-213ENST00000543552 AGRNO00468 2067 aa9.51□□□□□ -0.89
RTN3-213ENST00000543552 SNRPGP15A8MWD9 76 aa9.5□□□□□ -0.89
RTN3-213ENST00000543552 H3BMM0 161 aa9.5□□□□□ -0.89
RTN3-213ENST00000543552 CFDP00746 253 aaPredicted RBP9.5□□□□□ -0.89
RTN3-213ENST00000543552 S100A7P31151 101 aa9.5□□□□□ -0.89
RTN3-213ENST00000543552 PSMB3P49720 205 aa9.5□□□□□ -0.89
RTN3-213ENST00000543552 SPATA31B1PQ5VZV4 182 aa9.5□□□□□ -0.89
RTN3-213ENST00000543552 Q6ZTC4 211 aa9.5□□□□□ -0.89
RTN3-213ENST00000543552 LRTM2Q8N967 370 aa9.5□□□□□ -0.89
RTN3-213ENST00000543552 COQ8AQ8NI60 647 aa9.5□□□□□ -0.89
RTN3-213ENST00000543552 XCL2Q9UBD3 114 aa9.5□□□□□ -0.89
RTN3-213ENST00000543552 TMED3Q9Y3Q3 217 aa9.5□□□□□ -0.89
RTN3-213ENST00000543552 TMEM189A5PLL7 270 aa9.49□□□□□ -0.89
RTN3-213ENST00000543552 MEOX2P50222 304 aa9.49□□□□□ -0.89
RTN3-213ENST00000543552 LYZP61626 148 aa9.49□□□□□ -0.89
RTN3-213ENST00000543552 FOXI2Q6ZQN5 318 aa9.49□□□□□ -0.89
RTN3-213ENST00000543552 TRIM63Q969Q1 353 aa9.49□□□□□ -0.89
RTN3-213ENST00000543552 TRGV9Q99603 122 aa9.49□□□□□ -0.89
RTN3-213ENST00000543552 RNF126Q9BV68 326 aa9.49□□□□□ -0.89
RTN3-213ENST00000543552 PAIP2BQ9ULR5 123 aaKnown RBP9.49□□□□□ -0.89
RTN3-213ENST00000543552 HECTD4Q9Y4D8 3996 aa9.48□□□□□ -0.89
RTN3-213ENST00000543552 VPS13DQ5THJ4 4388 aa9.48□□□□□ -0.89
RTN3-213ENST00000543552 ELOA3CA0A087WX78 387 aaPredicted RBP9.48□□□□□ -0.89
RTN3-213ENST00000543552 ISLRO14498 428 aa9.48□□□□□ -0.89
RTN3-213ENST00000543552 PITX3O75364 302 aa9.48□□□□□ -0.89
RTN3-213ENST00000543552 ZNF90Q03938 601 aa9.48□□□□□ -0.89
RTN3-213ENST00000543552 GGNBP1Q5YKI7 109 aa9.48□□□□□ -0.89
RTN3-213ENST00000543552 OR8I2Q8N0Y5 310 aa9.48□□□□□ -0.89
RTN3-213ENST00000543552 LINC00052Q96N35 136 aa9.48□□□□□ -0.89
RTN3-213ENST00000543552 CLUHP3Q96NS8 147 aa9.48□□□□□ -0.89
RTN3-213ENST00000543552 APLNQ9ULZ1 77 aa9.48□□□□□ -0.89
RTN3-213ENST00000543552 SLC45A2Q9UMX9 530 aa9.48□□□□□ -0.89
RTN3-213ENST00000543552 DNAH6Q9C0G6 4158 aa9.48□□□□□ -0.89
RTN3-213ENST00000543552 IGHV4-4A0A075B6R2 117 aa9.47□□□□□ -0.89
RTN3-213ENST00000543552 IGKV1D-37A0A075B6S9 117 aa9.47□□□□□ -0.89
RTN3-213ENST00000543552 TEX48A0A1B0GUV7 120 aa9.47□□□□□ -0.89
RTN3-213ENST00000543552 CCDC160A6NGH7 325 aa9.47□□□□□ -0.89
RTN3-213ENST00000543552 SMIM9A6NGZ8 99 aa9.47□□□□□ -0.89
RTN3-213ENST00000543552 AMBPP02760 352 aa9.47□□□□□ -0.89
RTN3-213ENST00000543552 IAPPP10997 89 aa9.47□□□□□ -0.89
RTN3-213ENST00000543552 GALR1P47211 349 aa9.47□□□□□ -0.89
RTN3-213ENST00000543552 UBE2MP61081 183 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms