RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324		A0A1W2PPQ1	181 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	FAM90A10P	A6NDY2	464 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	FAM90A7P	A6NKC0	464 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	FAM90A23P	A8MXZ1	464 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324		H0Y980	276 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	C15orf65	H3BRN8	121 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324		J3QR06	171 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324		K7EP13	123 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	SSSCA1	O60232	199 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	HPRT1	P00492	218 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	PPY	P01298	95 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	CHRNA7	P36544	502 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	ZNF137P	P52743	207 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	ELL	P55199	621 aa	Predicted RBP	5.03	□□□□□ -1.6
CIT-213	ENST00000543324	YPEL3	P61236	119 aa	Predicted RBP	5.03	□□□□□ -1.6
CIT-213	ENST00000543324	SELENOT	P62341	195 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	RUNX1	Q01196	453 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	MEF2B	Q02080	365 aa	Predicted RBP	5.03	□□□□□ -1.6
CIT-213	ENST00000543324	EBI3	Q14213	229 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	ZNF726P1	Q15940	193 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	TMEM183B	Q1AE95	376 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	PIGY	Q3MUY2	71 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	ARSJ	Q5FYB0	599 aa	Predicted RBP	5.03	□□□□□ -1.6
CIT-213	ENST00000543324	COL5A1-AS1	Q5SY13	56 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	ZNF880	Q6PDB4	577 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	LINC00596	Q86U02	117 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	ZNF695	Q8IW36	515 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	LINC00528	Q8N1L1	170 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324		Q8N6K4	173 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	OR9G1	Q8NH87	305 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	NEK7	Q8TDX7	302 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	TOMM40L	Q969M1	308 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	ST6GALNAC6	Q969X2	333 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	CYYR1	Q96J86	154 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	SMIM7	Q9BQ49	75 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	SLC25A33	Q9BSK2	321 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	PSG11	Q9UQ72	335 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	RFNG	Q9Y644	331 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	PXMP4	Q9Y6I8	212 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	FAT4	Q6V0I7	4981 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	LRP1B	Q9NZR2	4599 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324	CTXND1	A0A1B0GTU2	59 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	ZFP92	A6NM28	416 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	CEBPZOS	A8MTT3	80 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	DEGS1	O15121	323 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	PDCD6	O75340	191 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	TUSC2	O75896	110 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	TMEM50A	O95807	157 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	SCGB1D1	O95968	90 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	TOMM40	O96008	361 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	AADAC	P22760	399 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	CD24	P25063	80 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	SSTR5	P35346	364 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	CEACAM3	P40198	252 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	VDAC2	P45880	294 aa	Predicted RBP	5.02	□□□□□ -1.61
CIT-213	ENST00000543324	CDKN1B	P46527	198 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	RPL29	P47914	159 aa	Known RBP	5.02	□□□□□ -1.61
CIT-213	ENST00000543324	TPPP2	P59282	170 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	FXYD4	P59646	89 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	RPS20	P60866	119 aa	Known RBP	5.02	□□□□□ -1.61
CIT-213	ENST00000543324	ZNF816	Q0VGE8	651 aa	Predicted RBP	5.02	□□□□□ -1.61
CIT-213	ENST00000543324	DIAPH2-AS1	Q14236	149 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	ADIRF	Q15847	76 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	PHLDA2	Q53GA4	152 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	CCDC144NL	Q6NUI1	221 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	C10orf99	Q6UWK7	81 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	ZNF497	Q6ZNH5	498 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	TBC1D26	Q86UD7	250 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324		Q8N1X5	172 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	OSR2	Q8N2R0	312 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	LINC00311	Q8N616	119 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	C5orf56	Q8N8D9	126 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	ZNF439	Q8NDP4	499 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	OR4B1	Q8NGF8	309 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	OR2D3	Q8NGH3	330 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	SCGB1C1	Q8TD33	95 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	DTD1	Q8TEA8	209 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	ORAOV1	Q8WV07	137 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	LSM10	Q969L4	123 aa	Known RBP	5.02	□□□□□ -1.61
CIT-213	ENST00000543324	MS4A10	Q96PG2	267 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	HDHD3	Q9BSH5	251 aa	Predicted RBP	5.02	□□□□□ -1.61
CIT-213	ENST00000543324	MAGT1	Q9H0U3	335 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	IDI2-AS1	Q9NZ38	188 aa		5.02	□□□□□ -1.61
CIT-213	ENST00000543324	SAA2-SAA4	A0A096LPE2	208 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	ZNF705F	A8MVS1	300 aa	Predicted RBP	5.01	□□□□□ -1.61
CIT-213	ENST00000543324	FAM90A26	D6RGX4	464 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	HSPB6	O14558	160 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	SOX15	O60248	233 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	CST7	O76096	145 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	REG1A	P05451	166 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	CTXN2	P0C2S0	81 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	ZNF705D	P0CH99	300 aa	Predicted RBP	5.01	□□□□□ -1.61
CIT-213	ENST00000543324	ZNF705B	P0CI00	300 aa	Predicted RBP	5.01	□□□□□ -1.61
CIT-213	ENST00000543324	IL3RA	P26951	378 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	GNRHR	P30968	328 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	PSMB3	P49720	205 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	RAB7A	P51149	207 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	PRRX1	P54821	245 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	RBX1	P62877	108 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	HBG1	P69891	147 aa		5.01	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms