RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 PXDC1Q5TGL8 231 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 IL34Q6ZMJ4 242 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 VN1R17PQ8TDU5 208 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 GAR1Q9NY12 217 aaKnown RBP8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 SLC45A2Q9UMX9 530 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 DMRT1Q9Y5R6 373 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 TRAV1-1A0A0B4J248 108 aa8.95□□□□□ -0.98
SRGAP1-205ENST00000542841 FAM223BA6NKX1 122 aa8.95□□□□□ -0.98
SRGAP1-205ENST00000542841 CLN5O75503 358 aa8.95□□□□□ -0.98
SRGAP1-205ENST00000542841 RND2P52198 227 aa8.95□□□□□ -0.98
SRGAP1-205ENST00000542841 B2MP61769 119 aa8.95□□□□□ -0.98
SRGAP1-205ENST00000542841 CASC10Q5T4H9 136 aa8.95□□□□□ -0.98
SRGAP1-205ENST00000542841 CYP2G1PQ6ZSU1 146 aa8.95□□□□□ -0.98
SRGAP1-205ENST00000542841 FAM223AQ8IWN6 122 aa8.95□□□□□ -0.98
SRGAP1-205ENST00000542841 NECAP1Q8NC96 275 aa8.95□□□□□ -0.98
SRGAP1-205ENST00000542841 FAM213BQ8TBF2 198 aa8.95□□□□□ -0.98
SRGAP1-205ENST00000542841 NPIPB3Q92617 1050 aa8.95□□□□□ -0.98
SRGAP1-205ENST00000542841 ACY3Q96HD9 319 aa8.95□□□□□ -0.98
SRGAP1-205ENST00000542841 CXorf58Q96LI9 332 aa8.95□□□□□ -0.98
SRGAP1-205ENST00000542841 RNF2Q99496 336 aa8.95□□□□□ -0.98
SRGAP1-205ENST00000542841 SLC39A9Q9NUM3 307 aa8.95□□□□□ -0.98
SRGAP1-205ENST00000542841 PXMP4Q9Y6I8 212 aa8.95□□□□□ -0.98
SRGAP1-205ENST00000542841 IGKV1OR2-108A0A075B7D4 117 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 CTXND1A0A1B0GTU2 59 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 RAB19A4D1S5 217 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 ZFP92A6NM28 416 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 SEC14L6B5MCN3 397 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 H2AFB1P0C5Y9 115 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 OR10J1P30954 320 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 MFAP4P55083 255 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 ZNF616Q08AN1 781 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 MLANAQ16655 118 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 C9orf152Q5JTZ5 239 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 FAM209BQ5JX69 171 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 ACSM6Q6P461 480 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 EIF4E3Q8N5X7 224 aaKnown RBP8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 STPG3Q8N7X2 389 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 OR5T1Q8NG75 326 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 OR10G4Q8NGN3 311 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 OR10G9Q8NGN4 311 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 OR10G7Q8NGN6 311 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 MUC7Q8TAX7 377 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 MBD3L1Q8WWY6 194 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 ACTR3CQ9C0K3 210 aaPredicted RBP8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 RPRMQ9NS64 109 aa8.94□□□□□ -0.98
SRGAP1-205ENST00000542841 IGKV1D-37A0A075B6S9 117 aa8.93□□□□□ -0.98
SRGAP1-205ENST00000542841 PPIFP30405 207 aaKnown RBP8.93□□□□□ -0.98
SRGAP1-205ENST00000542841 ELLP55199 621 aaPredicted RBP8.93□□□□□ -0.98
SRGAP1-205ENST00000542841 PLP1P60201 277 aa8.93□□□□□ -0.98
SRGAP1-205ENST00000542841 MIC13Q5XKP0 118 aa8.93□□□□□ -0.98
SRGAP1-205ENST00000542841 UQCC3Q6UW78 93 aa8.93□□□□□ -0.98
SRGAP1-205ENST00000542841 C19orf35Q6ZS72 473 aa8.93□□□□□ -0.98
SRGAP1-205ENST00000542841 OR1L4Q8NGR5 311 aa8.93□□□□□ -0.98
SRGAP1-205ENST00000542841 USMG5Q96IX5 58 aa8.93□□□□□ -0.98
SRGAP1-205ENST00000542841 PFDN5Q99471 154 aa8.93□□□□□ -0.98
SRGAP1-205ENST00000542841 MRPL32Q9BYC8 188 aaKnown RBP8.93□□□□□ -0.98
SRGAP1-205ENST00000542841 C21orf62Q9NYP8 219 aa8.93□□□□□ -0.98
SRGAP1-205ENST00000542841 FBXL7Q9UJT9 491 aa8.93□□□□□ -0.98
SRGAP1-205ENST00000542841 TRBV7-1A0A0A6YYK4 115 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 A0A1W2PPV4 95 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 SH2D7A6NKC9 451 aaPredicted RBP8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 LINC01548A6NM66 108 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 G3V318 75 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 YIF1AO95070 293 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 LINC00869P0C866 280 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 IGLC1P0CG04 106 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 CDC34P49427 236 aaPredicted RBP8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 YPEL3P61236 119 aaPredicted RBP8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 RHOBP62745 196 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 CFHR3Q02985 330 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 PMS2P11Q13670 270 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 C10orf99Q6UWK7 81 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 COMMD7Q86VX2 200 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 RPP25LQ8N5L8 163 aaKnown RBP8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 BPIFCQ8NFQ6 507 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 GATAD1Q8WUU5 269 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 PCNPQ8WW12 178 aaKnown RBP8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 MARC2Q969Z3 335 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 EEF1AKMT3Q96AZ1 226 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 MRPL36Q9P0J6 103 aaKnown RBP8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 RFNGQ9Y644 331 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 TENM2Q9NT68 2774 aa8.92□□□□□ -0.98
SRGAP1-205ENST00000542841 DYNC2H1Q8NCM8 4307 aaKnown RBP8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 ELOA3CA0A087WX78 387 aaPredicted RBP8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 A0A0G2JLM5 398 aa8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 GNG7O60262 68 aa8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 OR2J3O76001 311 aa8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 NDUFB8O95169 186 aa8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 TOMM40O96008 361 aa8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 IGLV1-40P01703 118 aa8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 TAGLN2P37802 199 aaKnown RBP8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 FHITP49789 147 aa8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 PPT1P50897 306 aa8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 SLC35B1P78383 322 aa8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 RHOGP84095 191 aa8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 S100A7AQ86SG5 101 aa8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 ASCL2Q99929 193 aa8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 HRH4Q9H3N8 390 aa8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 SMDT1Q9H4I9 107 aa8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 VSIRQ9H7M9 311 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms