RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 ATF4P18848 351 aaPredicted RBP12.02□□□□□ -0.49
CCND1-205ENST00000542367 RAB11AP62491 216 aa12.02□□□□□ -0.49
CCND1-205ENST00000542367 TRIQKQ629K1 86 aa12.02□□□□□ -0.49
CCND1-205ENST00000542367 TMEM217Q8N7C4 229 aa12.02□□□□□ -0.49
CCND1-205ENST00000542367 OR11H2Q8NH07 326 aa12.02□□□□□ -0.49
CCND1-205ENST00000542367 SLC35E1Q96K37 410 aa12.02□□□□□ -0.49
CCND1-205ENST00000542367 PAIP2BQ9ULR5 123 aaKnown RBP12.02□□□□□ -0.49
CCND1-205ENST00000542367 AGRNO00468 2067 aa12.01□□□□□ -0.49
CCND1-205ENST00000542367 LINC00854A0A1B0GVQ3 168 aa12.01□□□□□ -0.49
CCND1-205ENST00000542367 KNCNA6PVL3 124 aa12.01□□□□□ -0.49
CCND1-205ENST00000542367 MED6O75586 246 aa12.01□□□□□ -0.49
CCND1-205ENST00000542367 ZNF90Q03938 601 aa12.01□□□□□ -0.49
CCND1-205ENST00000542367 GGNBP1Q5YKI7 109 aa12.01□□□□□ -0.49
CCND1-205ENST00000542367 RNF125Q96EQ8 232 aa12.01□□□□□ -0.49
CCND1-205ENST00000542367 MAGT1Q9H0U3 335 aa12.01□□□□□ -0.49
CCND1-205ENST00000542367 IGKV1D-37A0A075B6S9 117 aa12□□□□□ -0.49
CCND1-205ENST00000542367 C9orf170A2RU37 121 aa12□□□□□ -0.49
CCND1-205ENST00000542367 NAP1L6A6NFF2 107 aa12□□□□□ -0.49
CCND1-205ENST00000542367 SYNGR2O43760 224 aa12□□□□□ -0.49
CCND1-205ENST00000542367 NDUFB6O95139 128 aa12□□□□□ -0.49
CCND1-205ENST00000542367 UBE2MP61081 183 aaKnown RBP12□□□□□ -0.49
CCND1-205ENST00000542367 SIGLEC15Q6ZMC9 328 aa12□□□□□ -0.49
CCND1-205ENST00000542367 TRPT1Q86TN4 253 aaKnown RBP12□□□□□ -0.49
CCND1-205ENST00000542367 CIB3Q96Q77 187 aaPredicted RBP12□□□□□ -0.49
CCND1-205ENST00000542367 SDHCQ99643 169 aaPredicted RBP12□□□□□ -0.49
CCND1-205ENST00000542367 PBDC1Q9BVG4 233 aa12□□□□□ -0.49
CCND1-205ENST00000542367 FLVCR2Q9UPI3 526 aa12□□□□□ -0.49
CCND1-205ENST00000542367 NUPR2A6NF83 97 aa11.99□□□□□ -0.49
CCND1-205ENST00000542367 WRBO00258 174 aa11.99□□□□□ -0.49
CCND1-205ENST00000542367 PSMG4Q5JS54 123 aa11.99□□□□□ -0.49
CCND1-205ENST00000542367 ACTL10Q5JWF8 245 aa11.99□□□□□ -0.49
CCND1-205ENST00000542367 CEMP1Q6PRD7 247 aaPredicted RBP11.99□□□□□ -0.49
CCND1-205ENST00000542367 HYDINQ4G0P3 5121 aa11.98□□□□□ -0.49
CCND1-205ENST00000542367 SNRPGP15A8MWD9 76 aa11.98□□□□□ -0.49
CCND1-205ENST00000542367 ADAP1O75689 374 aa11.98□□□□□ -0.49
CCND1-205ENST00000542367 GIG44P09565 113 aaPredicted RBP11.98□□□□□ -0.49
CCND1-205ENST00000542367 RPP30P78346 268 aaKnown RBP11.98□□□□□ -0.49
CCND1-205ENST00000542367 RAB40CQ96S21 281 aa11.98□□□□□ -0.49
CCND1-205ENST00000542367 NRN1Q9NPD7 142 aa11.98□□□□□ -0.49
CCND1-205ENST00000542367 PFDN2Q9UHV9 154 aa11.98□□□□□ -0.49
CCND1-205ENST00000542367 ALMS1Q8TCU4 4167 aa11.98□□□□□ -0.49
CCND1-205ENST00000542367 IGKV1OR2-108A0A075B7D4 117 aa11.97□□□□□ -0.49
CCND1-205ENST00000542367 CENPXA8MT69 81 aa11.97□□□□□ -0.49
CCND1-205ENST00000542367 FABP1P07148 127 aa11.97□□□□□ -0.49
CCND1-205ENST00000542367 OR4E1P0C645 316 aa11.97□□□□□ -0.49
CCND1-205ENST00000542367 SPP1P10451 314 aa11.97□□□□□ -0.49
CCND1-205ENST00000542367 LYZP61626 148 aa11.97□□□□□ -0.49
CCND1-205ENST00000542367 SNRPD3P62318 126 aaKnown RBP11.97□□□□□ -0.49
CCND1-205ENST00000542367 OR2F1Q13607 317 aa11.97□□□□□ -0.49
CCND1-205ENST00000542367 SPANXN5Q5MJ07 72 aa11.97□□□□□ -0.49
CCND1-205ENST00000542367 OR8G2PQ6IF36 304 aa11.97□□□□□ -0.49
CCND1-205ENST00000542367 MORN3Q6PF18 240 aaPredicted RBP11.97□□□□□ -0.49
CCND1-205ENST00000542367 TRGV9Q99603 122 aa11.97□□□□□ -0.49
CCND1-205ENST00000542367 PRSS46E5RG02 174 aa11.96□□□□□ -0.49
CCND1-205ENST00000542367 DEFB4AO15263 64 aa11.96□□□□□ -0.49
CCND1-205ENST00000542367 ANXA7P20073 488 aaKnown RBP11.96□□□□□ -0.49
CCND1-205ENST00000542367 BTCP35070 178 aa11.96□□□□□ -0.49
CCND1-205ENST00000542367 NUP62P37198 522 aaPredicted RBP11.96□□□□□ -0.49
CCND1-205ENST00000542367 THAP8Q8NA92 274 aa11.96□□□□□ -0.49
CCND1-205ENST00000542367 COQ8AQ8NI60 647 aa11.96□□□□□ -0.49
CCND1-205ENST00000542367 C11orf68Q9H3H3 251 aaKnown RBP11.96□□□□□ -0.49
CCND1-205ENST00000542367 SEPSECSQ9HD40 501 aaKnown RBP11.96□□□□□ -0.49
CCND1-205ENST00000542367 KLK5Q9Y337 293 aaPredicted RBP11.96□□□□□ -0.49
CCND1-205ENST00000542367 H3BP45 60 aa11.95□□□□□ -0.5
CCND1-205ENST00000542367 IFNA21P01568 189 aa11.95□□□□□ -0.5
CCND1-205ENST00000542367 IL7P13232 177 aa11.95□□□□□ -0.5
CCND1-205ENST00000542367 C4BPBP20851 252 aa11.95□□□□□ -0.5
CCND1-205ENST00000542367 NANOS2P60321 138 aaKnown RBP11.95□□□□□ -0.5
CCND1-205ENST00000542367 ID3Q02535 119 aa11.95□□□□□ -0.5
CCND1-205ENST00000542367 C4orf46Q504U0 113 aa11.95□□□□□ -0.5
CCND1-205ENST00000542367 TMEM41BQ5BJD5 291 aa11.95□□□□□ -0.5
CCND1-205ENST00000542367 C11orf45Q8TAV5 145 aa11.95□□□□□ -0.5
CCND1-205ENST00000542367 PHLDA1Q8WV24 401 aaPredicted RBP11.95□□□□□ -0.5
CCND1-205ENST00000542367 C7orf50Q9BRJ6 194 aaKnown RBP11.95□□□□□ -0.5
CCND1-205ENST00000542367 STRAPQ9Y3F4 350 aaKnown RBP11.95□□□□□ -0.5
CCND1-205ENST00000542367 NKX2-1P43699 371 aaPredicted RBP11.94□□□□□ -0.5
CCND1-205ENST00000542367 POLR2GP62487 172 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCND1-205ENST00000542367 LINC00476Q8WZB0 136 aa11.94□□□□□ -0.5
CCND1-205ENST00000542367 PPP1R14BQ96C90 147 aa11.94□□□□□ -0.5
CCND1-205ENST00000542367 CLEC5AQ9NY25 188 aa11.94□□□□□ -0.5
CCND1-205ENST00000542367 NDUFA13Q9P0J0 144 aa11.94□□□□□ -0.5
CCND1-205ENST00000542367 LY6G6CO95867 125 aa11.93□□□□□ -0.5
CCND1-205ENST00000542367 CFDP00746 253 aaPredicted RBP11.93□□□□□ -0.5
CCND1-205ENST00000542367 C1orf194Q5T5A4 169 aa11.93□□□□□ -0.5
CCND1-205ENST00000542367 Q8NAQ8 132 aa11.93□□□□□ -0.5
CCND1-205ENST00000542367 OR4D5Q8NGN0 318 aa11.93□□□□□ -0.5
CCND1-205ENST00000542367 WDR12Q9GZL7 423 aaKnown RBP11.93□□□□□ -0.5
CCND1-205ENST00000542367 MFFQ9GZY8 342 aa11.93□□□□□ -0.5
CCND1-205ENST00000542367 PSENENQ9NZ42 101 aa11.93□□□□□ -0.5
CCND1-205ENST00000542367 FBXL17Q9UF56 701 aa11.93□□□□□ -0.5
CCND1-205ENST00000542367 H3BMM0 161 aa11.92□□□□□ -0.5
CCND1-205ENST00000542367 PLA2G10O15496 165 aa11.92□□□□□ -0.5
CCND1-205ENST00000542367 AKR1C1Q04828 323 aa11.92□□□□□ -0.5
CCND1-205ENST00000542367 GSG1LQ6UXU4 331 aa11.92□□□□□ -0.5
CCND1-205ENST00000542367 TMEM182Q6ZP80 229 aaPredicted RBP11.92□□□□□ -0.5
CCND1-205ENST00000542367 OR8I2Q8N0Y5 310 aa11.92□□□□□ -0.5
CCND1-205ENST00000542367 CSNK1G2-AS1Q8NCQ2 148 aa11.92□□□□□ -0.5
CCND1-205ENST00000542367 LINC00052Q96N35 136 aa11.92□□□□□ -0.5
CCND1-205ENST00000542367 IGHV4-28A0A0C4DH34 117 aa11.91□□□□□ -0.5
CCND1-205ENST00000542367 ZNF705EA8MWA4 302 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms