RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 WDR12Q9GZL7 423 aaKnown RBP14.3□□□□□ -0.12
DDX11-220ENST00000542244 HSPB7Q9UBY9 170 aa14.3□□□□□ -0.12
DDX11-220ENST00000542244 IGHV4-4A0A075B6R2 117 aa14.29□□□□□ -0.12
DDX11-220ENST00000542244 GSTZ1O43708 216 aaPredicted RBP14.29□□□□□ -0.12
DDX11-220ENST00000542244 IFNA10P01566 189 aa14.29□□□□□ -0.12
DDX11-220ENST00000542244 SIGLEC15Q6ZMC9 328 aa14.29□□□□□ -0.12
DDX11-220ENST00000542244 PRRT1Q99946 306 aa14.29□□□□□ -0.12
DDX11-220ENST00000542244 SCGB2A1O75556 95 aa14.28□□□□□ -0.12
DDX11-220ENST00000542244 IGKV3-20P01619 116 aa14.28□□□□□ -0.12
DDX11-220ENST00000542244 DTD1Q8TEA8 209 aa14.28□□□□□ -0.12
DDX11-220ENST00000542244 IL22RA2Q969J5 263 aa14.28□□□□□ -0.12
DDX11-220ENST00000542244 PBDC1Q9BVG4 233 aa14.28□□□□□ -0.12
DDX11-220ENST00000542244 SLIRPQ9GZT3 109 aaKnown RBP14.28□□□□□ -0.12
DDX11-220ENST00000542244 NRN1Q9NPD7 142 aa14.28□□□□□ -0.12
DDX11-220ENST00000542244 CCDC59Q9P031 241 aaKnown RBP14.28□□□□□ -0.12
DDX11-220ENST00000542244 C11orf94C9JXX5 98 aa14.27□□□□□ -0.13
DDX11-220ENST00000542244 TNFSF8P32971 234 aa14.27□□□□□ -0.13
DDX11-220ENST00000542244 GAMTQ14353 236 aa14.27□□□□□ -0.13
DDX11-220ENST00000542244 SMCO1Q147U7 214 aa14.27□□□□□ -0.13
DDX11-220ENST00000542244 TMEM41BQ5BJD5 291 aa14.27□□□□□ -0.13
DDX11-220ENST00000542244 LGI3Q8N145 548 aa14.27□□□□□ -0.13
DDX11-220ENST00000542244 RNF125Q96EQ8 232 aa14.27□□□□□ -0.13
DDX11-220ENST00000542244 MCUBQ9NWR8 336 aa14.27□□□□□ -0.13
DDX11-220ENST00000542244 FAT2Q9NYQ8 4349 aa14.27□□□□□ -0.13
DDX11-220ENST00000542244 TRAV10A0A0B4J240 114 aa14.26□□□□□ -0.13
DDX11-220ENST00000542244 A0A0B4J2A0 478 aa14.26□□□□□ -0.13
DDX11-220ENST00000542244 CCR6P51684 374 aa14.26□□□□□ -0.13
DDX11-220ENST00000542244 KLF9Q13886 244 aaPredicted RBP14.26□□□□□ -0.13
DDX11-220ENST00000542244 ETFRF1Q6IPR1 90 aa14.26□□□□□ -0.13
DDX11-220ENST00000542244 SHPKQ9UHJ6 478 aa14.26□□□□□ -0.13
DDX11-220ENST00000542244 DNAH2Q9P225 4427 aa14.26□□□□□ -0.13
DDX11-220ENST00000542244 KIAA1109Q2LD37 5005 aa14.25□□□□□ -0.13
DDX11-220ENST00000542244 SOCS3O14543 225 aa14.25□□□□□ -0.13
DDX11-220ENST00000542244 EIF2B2P49770 351 aaKnown RBP14.25□□□□□ -0.13
DDX11-220ENST00000542244 AP2S1P53680 142 aaPredicted RBP14.25□□□□□ -0.13
DDX11-220ENST00000542244 OR2F1Q13607 317 aa14.25□□□□□ -0.13
DDX11-220ENST00000542244 PLA2G2EQ9NZK7 142 aa14.25□□□□□ -0.13
DDX11-220ENST00000542244 KCNIP3Q9Y2W7 256 aa14.25□□□□□ -0.13
DDX11-220ENST00000542244 IGKV1OR2-108A0A075B7D4 117 aa14.24□□□□□ -0.13
DDX11-220ENST00000542244 F6UB75 175 aa14.24□□□□□ -0.13
DDX11-220ENST00000542244 IAPPP10997 89 aa14.24□□□□□ -0.13
DDX11-220ENST00000542244 HLA-DRB4P13762 266 aa14.24□□□□□ -0.13
DDX11-220ENST00000542244 TCTAP57738 103 aa14.24□□□□□ -0.13
DDX11-220ENST00000542244 C17orf77Q96MU5 243 aa14.24□□□□□ -0.13
DDX11-220ENST00000542244 U3KQ87 197 aa14.24□□□□□ -0.13
DDX11-220ENST00000542244 HLA-DRB4X5D2U9 266 aa14.24□□□□□ -0.13
DDX11-220ENST00000542244 DNAH17Q9UFH2 4485 aa14.23□□□□□ -0.13
DDX11-220ENST00000542244 H3BMQ9 156 aa14.23□□□□□ -0.13
DDX11-220ENST00000542244 PITX3O75364 302 aa14.23□□□□□ -0.13
DDX11-220ENST00000542244 SNRPD3P62318 126 aaKnown RBP14.23□□□□□ -0.13
DDX11-220ENST00000542244 OR1S1Q8NH92 325 aa14.23□□□□□ -0.13
DDX11-220ENST00000542244 RAB2BQ8WUD1 216 aa14.23□□□□□ -0.13
DDX11-220ENST00000542244 LINC00052Q96N35 136 aa14.23□□□□□ -0.13
DDX11-220ENST00000542244 SCP2D1Q9UJQ7 156 aa14.23□□□□□ -0.13
DDX11-220ENST00000542244 DEFB131BA0A096LNP1 70 aa14.22□□□□□ -0.13
DDX11-220ENST00000542244 ZFP92A6NM28 416 aa14.22□□□□□ -0.13
DDX11-220ENST00000542244 NKX2-1P43699 371 aaPredicted RBP14.22□□□□□ -0.13
DDX11-220ENST00000542244 TMBIM6P55061 237 aa14.22□□□□□ -0.13
DDX11-220ENST00000542244 LYZP61626 148 aa14.22□□□□□ -0.13
DDX11-220ENST00000542244 ZNF705AQ6ZN79 300 aaPredicted RBP14.22□□□□□ -0.13
DDX11-220ENST00000542244 TMEM182Q6ZP80 229 aaPredicted RBP14.22□□□□□ -0.13
DDX11-220ENST00000542244 ZNF709Q8N972 641 aa14.22□□□□□ -0.13
DDX11-220ENST00000542244 TRIM63Q969Q1 353 aa14.22□□□□□ -0.13
DDX11-220ENST00000542244 C20orf173Q96LM9 149 aa14.22□□□□□ -0.13
DDX11-220ENST00000542244 SLC35B3Q9H1N7 401 aa14.22□□□□□ -0.13
DDX11-220ENST00000542244 RSL24D1Q9UHA3 163 aaKnown RBP14.22□□□□□ -0.13
DDX11-220ENST00000542244 IGHV3OR16-12A0A075B7B8 117 aa14.21□□□□□ -0.13
DDX11-220ENST00000542244 FABP12A6NFH5 140 aa14.21□□□□□ -0.13
DDX11-220ENST00000542244 ZNF705FA8MVS1 300 aaPredicted RBP14.21□□□□□ -0.13
DDX11-220ENST00000542244 ZNF705DP0CH99 300 aaPredicted RBP14.21□□□□□ -0.13
DDX11-220ENST00000542244 ZNF705BP0CI00 300 aaPredicted RBP14.21□□□□□ -0.13
DDX11-220ENST00000542244 EMP1P54849 157 aa14.21□□□□□ -0.13
DDX11-220ENST00000542244 TMED4Q7Z7H5 227 aa14.21□□□□□ -0.13
DDX11-220ENST00000542244 NOXA1Q86UR1 476 aa14.21□□□□□ -0.13
DDX11-220ENST00000542244 RNF126Q9BV68 326 aa14.21□□□□□ -0.13
DDX11-220ENST00000542244 SAV1Q9H4B6 383 aaPredicted RBP14.21□□□□□ -0.13
DDX11-220ENST00000542244 SEPSECSQ9HD40 501 aaKnown RBP14.21□□□□□ -0.13
DDX11-220ENST00000542244 GPX4P36969 197 aaPredicted RBP14.2□□□□□ -0.14
DDX11-220ENST00000542244 MAGT1Q9H0U3 335 aa14.2□□□□□ -0.14
DDX11-220ENST00000542244 PRSS46E5RG02 174 aa14.19□□□□□ -0.14
DDX11-220ENST00000542244 AMBPP02760 352 aa14.19□□□□□ -0.14
DDX11-220ENST00000542244 GATA2P23769 480 aaPredicted RBP14.19□□□□□ -0.14
DDX11-220ENST00000542244 OR8G2PQ6IF36 304 aa14.19□□□□□ -0.14
DDX11-220ENST00000542244 MCFD2Q8NI22 146 aa14.19□□□□□ -0.14
DDX11-220ENST00000542244 SLC35E1Q96K37 410 aa14.19□□□□□ -0.14
DDX11-220ENST00000542244 PAIP2BQ9ULR5 123 aaKnown RBP14.19□□□□□ -0.14
DDX11-220ENST00000542244 V9GYH0 126 aa14.19□□□□□ -0.14
DDX11-220ENST00000542244 ZNF79Q15937 498 aa14.18□□□□□ -0.14
DDX11-220ENST00000542244 C1orf158Q8N1D5 194 aa14.18□□□□□ -0.14
DDX11-220ENST00000542244 OR4B1Q8NGF8 309 aa14.18□□□□□ -0.14
DDX11-220ENST00000542244 SCGB3A2Q96PL1 93 aa14.18□□□□□ -0.14
DDX11-220ENST00000542244 C1QTNF4Q9BXJ3 329 aa14.18□□□□□ -0.14
DDX11-220ENST00000542244 RABL2AQ9UBK7 228 aaPredicted RBP14.18□□□□□ -0.14
DDX11-220ENST00000542244 RABL2BQ9UNT1 228 aa14.18□□□□□ -0.14
DDX11-220ENST00000542244 A0A1B0GVY2 172 aa14.17□□□□□ -0.14
DDX11-220ENST00000542244 M0R2N4 97 aa14.17□□□□□ -0.14
DDX11-220ENST00000542244 PRM2P04554 102 aa14.17□□□□□ -0.14
DDX11-220ENST00000542244 NUTF2P61970 127 aaKnown RBP14.17□□□□□ -0.14
DDX11-220ENST00000542244 FOXI2Q6ZQN5 318 aa14.17□□□□□ -0.14
DDX11-220ENST00000542244 THAP8Q8NA92 274 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms